Re: [IMP-dev] rmsd function

[Keren Lasker <kerenl@salilab.org>]

makes sense btut less convinate. If we agree on xyz I'll put in it in  
algebra.
On Jul 10, 2009, at 1:39 AM, Dina Schneidman wrote:

> I suggest this interface, since it is better defined:
>
> IMPATOMEXPORT Float rmsd(const XYZs& m1 ,const XYZs& m2);
>
>
> On Thu, Jul 9, 2009 at 3:31 PM, Daniel Russel<drussel@gmail.com>  
> wrote:
> > 2009/7/9 Javier Ángel Velázquez Muriel <javi@salilab.org>:
> > > It does not matter. rmsd is going to give you a number no matter  
> > > if the
> > > molecules are aligned or not. The thing is how you interpret the  
> > > number, so
> > > discussing about alignment does not apply for implementation, only  
> > > for
> > > interpretation. Correspondence does apply. If not addressed, fine  
> > > with me :)
> > Sure. But for the API, all we really care about is interpretation :-)
> > I think the name had better make clear which interpretation is
> > correct.
> > _______________________________________________
> > IMP-dev mailing list
> > IMP-dev@salilab.org
> > https://salilab.org/mailman/listinfo/imp-dev
> _______________________________________________
> IMP-dev mailing list
> IMP-dev@salilab.org
> https://salilab.org/mailman/listinfo/imp-dev