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dna
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Second, some cleanup of the comments in the grid
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grid3d
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add set methods for the linear parameters
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linear
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fix header include order on opt
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opt
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fix a bad bug in sqrt with units
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sqrt
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change the constant internal::T to internal::DEFAULT_TEMPERATURE since T is a bit short of a name :-)
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T
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Add the tunnel restraint which keeps particles out of an axis aligned slap with a hole in it. Kind of specific, but...
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tunnel
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