Daniel Russel wrote:
- by the way, it might be useful to include some more tags to the restraints to account for hierarchies. either some fixed number of hierarchies (frank had 14, i think) or fancier to model the universe.I don't understand. How would this go in the restraints?
As designed, the hierarchy is encoded primarily in the particles and restraint sets, not the restraint attributes. Then you just turn on/off sets of particles (or sets of restraints) accordingly.
Ben -- ben@salilab.org http://salilab.org/~ben/ "It is a capital mistake to theorize before one has data." - Sir Arthur Conan Doyle