kernel Directory Reference

Directory dependency graph for kernel:

Files
file	kernel/AttributeOptimizer.h [code]
	Base class for all optimizers.
file	kernel/base_types.h [code]
	Basic types used by IMP.
file	kernel/Configuration.h [code]
	Store a set of configurations of the model.
file	kernel/ConfigurationSet.h [code]
	Store a set of configurations of the model.
file	kernel/constants.h [code]
	Various useful constants.
file	kernel/Constraint.h [code]
	A base class for constraints.
file	kernel/container_base.h [code]
	Abstract base class for containers of particles.
file	kernel/container_macros.h [code]
	Macros to define containers of objects.
file	kernel/Decorator.h [code]
	The base class for decorators.
file	kernel/decorator_macros.h [code]
	Various general useful macros for IMP.
file	kernel/dependency_graph.h [code]
	Build dependency graphs on models.
file	kernel/DerivativeAccumulator.h [code]
	Class for adding derivatives from restraints to the model.
file	kernel/doxygen.h [code]
	Import kernel classes into the IMP scope in docs.
file	kernel/FloatIndex.h [code]
	Various general useful functions for IMP.
file	kernel/functor.h [code]
	Various important functionality for implementing decorators.
file	kernel/generic.h [code]
	Various important functionality for implementing decorators.
file	kernel/input_output.h [code]
	Single variable function.
file	kernel/io.h [code]
	Handle read/write of Model data from/to files.
file	kernel_config.h [code]
file	kernel/Key.h [code]
	Keys to cache lookup of attribute strings.
file	kernel/macros.h [code]
	Various general useful macros for IMP.
file	kernel/Model.h [code]
	Storage of a model, its restraints, constraints and particles.
file	kernel/model_object_helpers.h [code]
	Single variable function.
file	kernel/ModelObject.h [code]
	Single variable function.
file	kernel/Optimizer.h [code]
	Base class for all optimizers.
file	kernel/OptimizerState.h [code]
	Shared optimizer state.
file	kernel/pair_macros.h [code]
	Macros for various classes.
file	kernel/PairContainer.h [code]
	A container for Pairs.
file	kernel/PairDerivativeModifier.h [code]
	A Modifier on kernel::ParticlePairsTemp.
file	kernel/PairModifier.h [code]
	A Modifier on kernel::ParticlePairsTemp.
file	kernel/PairPredicate.h [code]
	Define PairPredicate.
file	kernel/PairScore.h [code]
	Define PairScore.
file	kernel/Particle.h [code]
	Classes to handle individual model particles. (Note that implementation of inline functions in in internal)
file	kernel/particle_index.h [code]
	Various general useful functions for IMP.
file	kernel/ParticleTuple.h [code]
	Classes to handle individual model particles.
file	kernel/python_only.h [code]
	Build dependency graphs on models.
file	kernel/quad_macros.h [code]
	Macros for various classes.
file	kernel/QuadContainer.h [code]
	A container for Quads.
file	kernel/QuadDerivativeModifier.h [code]
	A Modifier on kernel::ParticleQuadsTemp.
file	kernel/QuadModifier.h [code]
	A Modifier on kernel::ParticleQuadsTemp.
file	kernel/QuadPredicate.h [code]
	Define QuadPredicate.
file	kernel/QuadScore.h [code]
	Define QuadScore.
file	kernel/Refiner.h [code]
	Refine a particle into a list of particles.
file	kernel/Restraint.h [code]
	Abstract base class for all restraints.
file	kernel/RestraintSet.h [code]
	Used to hold a set of related restraints.
file	kernel/Sampler.h [code]
	Base class for all samplers.
file	kernel/scoped.h [code]
	Various general useful functions for IMP.
file	kernel/ScoreAccumulator.h [code]
	Class for adding scores from restraints to the model.
file	kernel/ScoreState.h [code]
	Shared score state.
file	kernel/ScoringFunction.h [code]
	Storage of a model, its restraints, constraints and particles.
file	kernel/singleton_macros.h [code]
	Macros for various classes.
file	kernel/SingletonContainer.h [code]
	A container for Singletons.
file	kernel/SingletonDerivativeModifier.h [code]
	A Modifier on kernel::ParticlesTemp.
file	kernel/SingletonModifier.h [code]
	A Modifier on kernel::ParticlesTemp.
file	kernel/SingletonPredicate.h [code]
	Define SingletonPredicate.
file	kernel/SingletonScore.h [code]
	Define SingletonScore.
file	kernel/triplet_macros.h [code]
	Macros for various classes.
file	kernel/TripletContainer.h [code]
	A container for Triplets.
file	kernel/TripletDerivativeModifier.h [code]
	A Modifier on kernel::ParticleTripletsTemp.
file	kernel/TripletModifier.h [code]
	A Modifier on kernel::ParticleTripletsTemp.
file	kernel/TripletPredicate.h [code]
	Define TripletPredicate.
file	kernel/TripletScore.h [code]
	Define TripletScore.
file	kernel/UnaryFunction.h [code]
	Single variable function.
file	kernel/Undecorator.h [code]
	The base class for decorators.
file	kernel/utility.h [code]
	For backwards compatibility.