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IMP
2.4.0
The Integrative Modeling Platform
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IMP
2.4.0
The Integrative Modeling Platform
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This is the complete list of members for IMP::saxs::Profile, including all inherited members.
| add(const Profile *other_profile, Float weight=1.0) | IMP::saxs::Profile | |
| add(const std::vector< Profile * > &profiles, const std::vector< Float > &weights=std::vector< Float >()) | IMP::saxs::Profile | |
| add_entry(Float q, Float intensity, Float error=1.0) | IMP::saxs::Profile | |
| add_errors() | IMP::saxs::Profile | |
| add_noise(Float percentage=0.03) | IMP::saxs::Profile | |
| add_partial_profiles(const Profile *other_profile, Float weight=1.0) | IMP::saxs::Profile | |
| add_partial_profiles(const std::vector< Profile * > &profiles, const std::vector< Float > &weights=std::vector< Float >()) | IMP::saxs::Profile | |
| average_radius_ (defined in IMP::saxs::Profile) | IMP::saxs::Profile | protected |
| average_volume_ (defined in IMP::saxs::Profile) | IMP::saxs::Profile | protected |
| background_adjust(double start_q) | IMP::saxs::Profile | |
| beam_profile_ (defined in IMP::saxs::Profile) | IMP::saxs::Profile | protected |
| c1_ (defined in IMP::saxs::Profile) | IMP::saxs::Profile | protected |
| c2_ (defined in IMP::saxs::Profile) | IMP::saxs::Profile | protected |
| calculate_I0(const kernel::Particles &particles, FormFactorType ff_type=HEAVY_ATOMS) | IMP::saxs::Profile | |
| calculate_profile(const kernel::Particles &particles, FormFactorType ff_type=HEAVY_ATOMS, bool reciprocal=false) | IMP::saxs::Profile | |
| calculate_profile(const kernel::Particles &particles1, const kernel::Particles &particles2, FormFactorType ff_type=HEAVY_ATOMS) | IMP::saxs::Profile | |
| calculate_profile_constant_form_factor(const kernel::Particles &particles, Float form_factor=1.0) | IMP::saxs::Profile | |
| calculate_profile_partial(const kernel::Particles &particles, const Floats &surface=Floats(), FormFactorType ff_type=HEAVY_ATOMS) | IMP::saxs::Profile | |
| calculate_profile_partial(const kernel::Particles &particles1, const kernel::Particles &particles2, const Floats &surface1=Floats(), const Floats &surface2=Floats(), FormFactorType ff_type=HEAVY_ATOMS) | IMP::saxs::Profile | |
| calculate_profile_reciprocal_partial(const kernel::Particles &particles, const Floats &surface=Floats(), FormFactorType ff_type=HEAVY_ATOMS) (defined in IMP::saxs::Profile) | IMP::saxs::Profile | |
| calculate_profile_symmetric(const kernel::Particles &particles, unsigned int n, FormFactorType ff_type=HEAVY_ATOMS) (defined in IMP::saxs::Profile) | IMP::saxs::Profile | |
| clear_caches() | IMP::base::Object | virtual |
| copy_errors(const Profile *exp_profile) (defined in IMP::saxs::Profile) | IMP::saxs::Profile | |
| delta_q_ (defined in IMP::saxs::Profile) | IMP::saxs::Profile | protected |
| distribution_2_profile(const RadialDistributionFunction &r_dist) | IMP::saxs::Profile | |
| do_destroy() | IMP::base::Object | protectedvirtual |
| downsample(Profile *downsampled_profile, unsigned int point_number) const | IMP::saxs::Profile | |
| error_ (defined in IMP::saxs::Profile) | IMP::saxs::Profile | protected |
| experimental_ (defined in IMP::saxs::Profile) | IMP::saxs::Profile | protected |
| ff_table_ (defined in IMP::saxs::Profile) | IMP::saxs::Profile | protected |
| get_average_radius() const (defined in IMP::saxs::Profile) | IMP::saxs::Profile | |
| get_check_level() const (defined in IMP::base::Object) | IMP::base::Object | |
| get_delta_q() const | IMP::saxs::Profile | |
| get_error(unsigned int i) const (defined in IMP::saxs::Profile) | IMP::saxs::Profile | |
| get_id() const (defined in IMP::saxs::Profile) | IMP::saxs::Profile | |
| get_intensity(unsigned int i) const (defined in IMP::saxs::Profile) | IMP::saxs::Profile | |
| get_log_level() const (defined in IMP::base::Object) | IMP::base::Object | |
| get_max_q() const | IMP::saxs::Profile | |
| get_min_q() const | IMP::saxs::Profile | |
| get_name() const (defined in IMP::saxs::Profile) | IMP::saxs::Profile | |
| get_q(unsigned int i) const (defined in IMP::saxs::Profile) | IMP::saxs::Profile | |
| get_type_name() const (defined in IMP::saxs::Profile) | IMP::saxs::Profile | virtual |
| get_version_info() const | IMP::saxs::Profile | virtual |
| get_weight(unsigned int i) const (defined in IMP::saxs::Profile) | IMP::saxs::Profile | |
| id_ (defined in IMP::saxs::Profile) | IMP::saxs::Profile | protected |
| init() (defined in IMP::saxs::Profile) | IMP::saxs::Profile | protected |
| intensity_ (defined in IMP::saxs::Profile) | IMP::saxs::Profile | protected |
| is_uniform_sampling() const | IMP::saxs::Profile | |
| max_q_ (defined in IMP::saxs::Profile) | IMP::saxs::Profile | protected |
| min_q_ (defined in IMP::saxs::Profile) | IMP::saxs::Profile | protected |
| modulation_function_parameter_ (defined in IMP::saxs::Profile) | IMP::saxs::Profile | static |
| name_ (defined in IMP::saxs::Profile) | IMP::saxs::Profile | protected |
| NonCopyable() (defined in IMP::base::NonCopyable) | IMP::base::NonCopyable | protected |
| Object(std::string name) | IMP::base::Object | protected |
| offset(Float c) | IMP::saxs::Profile | |
| partial_profiles_ (defined in IMP::saxs::Profile) | IMP::saxs::Profile | protected |
| Profile(const String &file_name, bool fit_file=false) | IMP::saxs::Profile | |
| Profile(Float qmin=0.0, Float qmax=0.5, Float delta=0.005) | IMP::saxs::Profile | |
| profile_2_distribution(RadialDistributionFunction &rd, Float max_distance) const | IMP::saxs::Profile | |
| q_ (defined in IMP::saxs::Profile) | IMP::saxs::Profile | protected |
| q_mapping_ (defined in IMP::saxs::Profile) | IMP::saxs::Profile | protected |
| radius_of_gyration(double end_q_rg=1.3) const | IMP::saxs::Profile | |
| read_partial_profiles(const String &file_name) | IMP::saxs::Profile | |
| read_SAXS_file(const String &file_name, bool fit_file=false) | IMP::saxs::Profile | |
| resample(const Profile *exp_profile, Profile *resampled_profile, bool partial_profiles=false) const | IMP::saxs::Profile | |
| scale(Float c) | IMP::saxs::Profile | |
| set_average_radius(Float r) (defined in IMP::saxs::Profile) | IMP::saxs::Profile | |
| set_average_volume(Float v) (defined in IMP::saxs::Profile) | IMP::saxs::Profile | |
| set_beam_profile(std::string beam_profile_file) (defined in IMP::saxs::Profile) | IMP::saxs::Profile | |
| set_check_level(CheckLevel l) | IMP::base::Object | |
| set_ff_table(FormFactorTable *ff_table) | IMP::saxs::Profile | |
| set_id(unsigned int id) (defined in IMP::saxs::Profile) | IMP::saxs::Profile | |
| set_intensity(unsigned int i, Float iq) (defined in IMP::saxs::Profile) | IMP::saxs::Profile | |
| set_log_level(LogLevel l) | IMP::base::Object | |
| set_name(std::string name) (defined in IMP::saxs::Profile) | IMP::saxs::Profile | |
| set_was_used(bool tf) const | IMP::base::Object | |
| show(std::ostream &out=std::cout) const (defined in IMP::base::Object) | IMP::base::Object | |
| size() const | IMP::saxs::Profile | |
| sum_partial_profiles(Float c1, Float c2, bool check_cashed=true) | IMP::saxs::Profile | |
| write_partial_profiles(const String &file_name) const | IMP::saxs::Profile | |
| write_SAXS_file(const String &file_name, Float max_q=0.0) const | IMP::saxs::Profile | |
| ~Object() (defined in IMP::base::Object) | IMP::base::Object | virtual |
| ~Profile() (defined in IMP::saxs::Profile) | IMP::saxs::Profile | protectedvirtual |