Normal distribution of Function.
Jeffreys prior for in the von Mises distribution.
Normal distribution of Function.
Normal distribution of Function.
Normal distribution of Function.
A pmf based likelihood function with prior knowledge on the flase positive rate.
A lognormal restraint that uses the ISPA model to model NOE-derived distance fit. ...
A lognormal restraint that uses the ISPA model to model HBond-derived distance fit.
An implementation of the d-norm to make an ambiguous restraint.
Common scoring functions.
A decorator for switching parameters particles.
Restraint two sets of gaussians (model and gmm derived from EM map)
A decorator for scale parameters particles.
A modifier which perturbs XYZs or Nuisances with a constant energy MD simulation. ...
A pmf based likelihood function with prior knowledge on the flase positive rate.
Simple molecular dynamics optimizer.
A decorator for nuisance parameters particles.
Classes for general functions.
Normal distribution of Function.
Normal distribution of Function.
Normal distribution of Function.
A hybrid monte carlo implementation.
A mover that transforms a rigid body.
A lognormal restraint that uses the ISPA model to model NOE-derived distance fit. ...
A lognormal restraint that uses the ISPA model to model NOE-derived distance fit. ...
A lognormal restraint that uses the ISPA model to model NOE-derived distance fit. ...
Add weights for a set of states to a particle.
FRET_R restraint to use in vivo FRET data [Muller et al. Mol Biol Cell 16, 3341, 2005].
A restraint on a scale parameter.
A sigmoid shaped restraint between residues with discrete classifier and ambiguous assignment...
TALOS dihedral restraint between four particles.
kernel::Restraint and ScoreState for GaussianProcessInterpolation
A lognormal restraint that uses the ISPA model to model NOE-derived distance fit. ...
A simple quadric repulsive term between two atoms. Restraint is zero when the distance equals the sum...
Auxiliary class useful for FRET_R restraint.
Calculate the -Log of a list of restraints.
Classes for general functions.
Conjugate prior for in the von Mises distribution.
