IMP  2.3.1
The Integrative Modeling Platform
core/__init__.py
1 # This file was automatically generated by SWIG (http://www.swig.org).
2 # Version 3.0.2
3 #
4 # Do not make changes to this file unless you know what you are doing--modify
5 # the SWIG interface file instead.
6 
7 
8 
9 
10 
11 from sys import version_info
12 if version_info >= (2,6,0):
13  def swig_import_helper():
14  from os.path import dirname
15  import imp
16  fp = None
17  try:
18  fp, pathname, description = imp.find_module('_IMP_core', [dirname(__file__)])
19  except ImportError:
20  import _IMP_core
21  return _IMP_core
22  if fp is not None:
23  try:
24  _mod = imp.load_module('_IMP_core', fp, pathname, description)
25  finally:
26  fp.close()
27  return _mod
28  _IMP_core = swig_import_helper()
29  del swig_import_helper
30 else:
31  import _IMP_core
32 del version_info
33 try:
34  _swig_property = property
35 except NameError:
36  pass # Python < 2.2 doesn't have 'property'.
37 def _swig_setattr_nondynamic(self,class_type,name,value,static=1):
38  if (name == "thisown"): return self.this.own(value)
39  if (name == "this"):
40  if type(value).__name__ == 'SwigPyObject':
41  self.__dict__[name] = value
42  return
43  method = class_type.__swig_setmethods__.get(name,None)
44  if method: return method(self,value)
45  if (not static):
46  self.__dict__[name] = value
47  else:
48  raise AttributeError("You cannot add attributes to %s" % self)
49 
50 def _swig_setattr(self,class_type,name,value):
51  return _swig_setattr_nondynamic(self,class_type,name,value,0)
52 
53 def _swig_getattr(self,class_type,name):
54  if (name == "thisown"): return self.this.own()
55  method = class_type.__swig_getmethods__.get(name,None)
56  if method: return method(self)
57  raise AttributeError(name)
58 
59 def _swig_repr(self):
60  try: strthis = "proxy of " + self.this.__repr__()
61  except: strthis = ""
62  return "<%s.%s; %s >" % (self.__class__.__module__, self.__class__.__name__, strthis,)
63 
64 try:
65  _object = object
66  _newclass = 1
67 except AttributeError:
68  class _object : pass
69  _newclass = 0
70 
71 
72 try:
73  import weakref
74  weakref_proxy = weakref.proxy
75 except:
76  weakref_proxy = lambda x: x
77 
78 
79 class IMP_CORE_SwigPyIterator(_object):
80  """Proxy of C++ swig::IMP_CORE_SwigPyIterator class"""
81  __swig_setmethods__ = {}
82  __setattr__ = lambda self, name, value: _swig_setattr(self, IMP_CORE_SwigPyIterator, name, value)
83  __swig_getmethods__ = {}
84  __getattr__ = lambda self, name: _swig_getattr(self, IMP_CORE_SwigPyIterator, name)
85  def __init__(self, *args, **kwargs): raise AttributeError("No constructor defined - class is abstract")
86  __repr__ = _swig_repr
87  __swig_destroy__ = _IMP_core.delete_IMP_CORE_SwigPyIterator
88  __del__ = lambda self : None;
89  def value(self):
90  """value(IMP_CORE_SwigPyIterator self) -> PyObject *"""
91  return _IMP_core.IMP_CORE_SwigPyIterator_value(self)
92 
93  def incr(self, n=1):
94  """
95  incr(IMP_CORE_SwigPyIterator self, size_t n=1) -> IMP_CORE_SwigPyIterator
96  incr(IMP_CORE_SwigPyIterator self) -> IMP_CORE_SwigPyIterator
97  """
98  return _IMP_core.IMP_CORE_SwigPyIterator_incr(self, n)
99 
100  def decr(self, n=1):
101  """
102  decr(IMP_CORE_SwigPyIterator self, size_t n=1) -> IMP_CORE_SwigPyIterator
103  decr(IMP_CORE_SwigPyIterator self) -> IMP_CORE_SwigPyIterator
104  """
105  return _IMP_core.IMP_CORE_SwigPyIterator_decr(self, n)
106 
107  def distance(self, *args):
108  """distance(IMP_CORE_SwigPyIterator self, IMP_CORE_SwigPyIterator x) -> ptrdiff_t"""
109  return _IMP_core.IMP_CORE_SwigPyIterator_distance(self, *args)
110 
111  def equal(self, *args):
112  """equal(IMP_CORE_SwigPyIterator self, IMP_CORE_SwigPyIterator x) -> bool"""
113  return _IMP_core.IMP_CORE_SwigPyIterator_equal(self, *args)
114 
115  def copy(self):
116  """copy(IMP_CORE_SwigPyIterator self) -> IMP_CORE_SwigPyIterator"""
117  return _IMP_core.IMP_CORE_SwigPyIterator_copy(self)
118 
119  def next(self):
120  """next(IMP_CORE_SwigPyIterator self) -> PyObject *"""
121  return _IMP_core.IMP_CORE_SwigPyIterator_next(self)
122 
123  def __next__(self):
124  """__next__(IMP_CORE_SwigPyIterator self) -> PyObject *"""
125  return _IMP_core.IMP_CORE_SwigPyIterator___next__(self)
126 
127  def previous(self):
128  """previous(IMP_CORE_SwigPyIterator self) -> PyObject *"""
129  return _IMP_core.IMP_CORE_SwigPyIterator_previous(self)
130 
131  def advance(self, *args):
132  """advance(IMP_CORE_SwigPyIterator self, ptrdiff_t n) -> IMP_CORE_SwigPyIterator"""
133  return _IMP_core.IMP_CORE_SwigPyIterator_advance(self, *args)
134 
135  def __eq__(self, *args):
136  """__eq__(IMP_CORE_SwigPyIterator self, IMP_CORE_SwigPyIterator x) -> bool"""
137  return _IMP_core.IMP_CORE_SwigPyIterator___eq__(self, *args)
138 
139  def __ne__(self, *args):
140  """__ne__(IMP_CORE_SwigPyIterator self, IMP_CORE_SwigPyIterator x) -> bool"""
141  return _IMP_core.IMP_CORE_SwigPyIterator___ne__(self, *args)
142 
143  def __iadd__(self, *args):
144  """__iadd__(IMP_CORE_SwigPyIterator self, ptrdiff_t n) -> IMP_CORE_SwigPyIterator"""
145  return _IMP_core.IMP_CORE_SwigPyIterator___iadd__(self, *args)
146 
147  def __isub__(self, *args):
148  """__isub__(IMP_CORE_SwigPyIterator self, ptrdiff_t n) -> IMP_CORE_SwigPyIterator"""
149  return _IMP_core.IMP_CORE_SwigPyIterator___isub__(self, *args)
150 
151  def __add__(self, *args):
152  """__add__(IMP_CORE_SwigPyIterator self, ptrdiff_t n) -> IMP_CORE_SwigPyIterator"""
153  return _IMP_core.IMP_CORE_SwigPyIterator___add__(self, *args)
154 
155  def __sub__(self, *args):
156  """
157  __sub__(IMP_CORE_SwigPyIterator self, ptrdiff_t n) -> IMP_CORE_SwigPyIterator
158  __sub__(IMP_CORE_SwigPyIterator self, IMP_CORE_SwigPyIterator x) -> ptrdiff_t
159  """
160  return _IMP_core.IMP_CORE_SwigPyIterator___sub__(self, *args)
161 
162  def __iter__(self): return self
163 IMP_CORE_SwigPyIterator_swigregister = _IMP_core.IMP_CORE_SwigPyIterator_swigregister
164 IMP_CORE_SwigPyIterator_swigregister(IMP_CORE_SwigPyIterator)
165 
166 _value_types=[]
167 _object_types=[]
168 _raii_types=[]
169 _plural_types=[]
170 
171 IMP_DEBUG = _IMP_core.IMP_DEBUG
172 IMP_RELEASE = _IMP_core.IMP_RELEASE
173 IMP_SILENT = _IMP_core.IMP_SILENT
174 IMP_PROGRESS = _IMP_core.IMP_PROGRESS
175 IMP_TERSE = _IMP_core.IMP_TERSE
176 IMP_VERBOSE = _IMP_core.IMP_VERBOSE
177 IMP_MEMORY = _IMP_core.IMP_MEMORY
178 IMP_NONE = _IMP_core.IMP_NONE
179 IMP_USAGE = _IMP_core.IMP_USAGE
180 IMP_INTERNAL = _IMP_core.IMP_INTERNAL
181 IMP_BASE_HAS_LOG4CXX = _IMP_core.IMP_BASE_HAS_LOG4CXX
182 IMP_COMPILER_HAS_AUTO = _IMP_core.IMP_COMPILER_HAS_AUTO
183 IMP_COMPILER_HAS_DEBUG_VECTOR = _IMP_core.IMP_COMPILER_HAS_DEBUG_VECTOR
184 IMP_BASE_HAS_BOOST_RANDOM = _IMP_core.IMP_BASE_HAS_BOOST_RANDOM
185 IMP_BASE_HAS_GPERFTOOLS = _IMP_core.IMP_BASE_HAS_GPERFTOOLS
186 IMP_BASE_HAS_TCMALLOC_HEAPCHECKER = _IMP_core.IMP_BASE_HAS_TCMALLOC_HEAPCHECKER
187 IMP_BASE_HAS_TCMALLOC_HEAPPROFILER = _IMP_core.IMP_BASE_HAS_TCMALLOC_HEAPPROFILER
188 IMPBASE_SHOW_WARNINGS = _IMP_core.IMPBASE_SHOW_WARNINGS
189 import sys
190 class _DirectorObjects(object):
191  """@internal Simple class to keep references to director objects
192  to prevent premature deletion."""
193  def __init__(self):
194  self._objects = []
195  def register(self, obj):
196  """Take a reference to a director object; will only work for
197  refcounted C++ classes"""
198  if hasattr(obj, 'get_ref_count'):
199  self._objects.append(obj)
200  def cleanup(self):
201  """Only drop our reference and allow cleanup by Python if no other
202  Python references exist (we hold 3 references: one in self._objects,
203  one in x, and one in the argument list for getrefcount) *and* no
204  other C++ references exist (the Python object always holds one)"""
205  objs = [x for x in self._objects if sys.getrefcount(x) > 3 \
206  or x.get_ref_count() > 1]
207 
208 
209  self._objects = objs
210  def get_object_count(self):
211  """Get number of director objects (useful for testing only)"""
212  return len(self._objects)
213 _director_objects = _DirectorObjects()
214 
215 DEFAULT_CHECK = _IMP_core.DEFAULT_CHECK
216 NONE = _IMP_core.NONE
217 USAGE = _IMP_core.USAGE
218 USAGE_AND_INTERNAL = _IMP_core.USAGE_AND_INTERNAL
219 
220 def set_check_level(*args):
221  """set_check_level(IMP::base::CheckLevel tf)"""
222  return _IMP_core.set_check_level(*args)
223 
224 def get_check_level():
225  """get_check_level() -> IMP::base::CheckLevel"""
226  return _IMP_core.get_check_level()
227 class _ostream(_object):
228  """Proxy of C++ std::ostream class"""
229  __swig_setmethods__ = {}
230  __setattr__ = lambda self, name, value: _swig_setattr(self, _ostream, name, value)
231  __swig_getmethods__ = {}
232  __getattr__ = lambda self, name: _swig_getattr(self, _ostream, name)
233  def __init__(self, *args, **kwargs): raise AttributeError("No constructor defined")
234  __repr__ = _swig_repr
235  def write(self, *args):
236  """write(_ostream self, char const * osa_buf)"""
237  return _IMP_core._ostream_write(self, *args)
238 
239 _ostream_swigregister = _IMP_core._ostream_swigregister
240 _ostream_swigregister(_ostream)
241 
242 IMP_COMPILER_HAS_OVERRIDE = _IMP_core.IMP_COMPILER_HAS_OVERRIDE
243 IMP_COMPILER_HAS_FINAL = _IMP_core.IMP_COMPILER_HAS_FINAL
244 IMP_HAS_NOEXCEPT = _IMP_core.IMP_HAS_NOEXCEPT
245 import IMP.base
246 IMP_CGAL_HAS_BOOST_FILESYSTEM = _IMP_core.IMP_CGAL_HAS_BOOST_FILESYSTEM
247 IMP_CGAL_HAS_BOOST_PROGRAMOPTIONS = _IMP_core.IMP_CGAL_HAS_BOOST_PROGRAMOPTIONS
248 IMP_CGAL_HAS_BOOST_RANDOM = _IMP_core.IMP_CGAL_HAS_BOOST_RANDOM
249 IMP_CGAL_HAS_BOOST_SYSTEM = _IMP_core.IMP_CGAL_HAS_BOOST_SYSTEM
250 IMPCGAL_SHOW_WARNINGS = _IMP_core.IMPCGAL_SHOW_WARNINGS
251 import IMP.cgal
252 IMP_ALGEBRA_HAS_IMP_CGAL = _IMP_core.IMP_ALGEBRA_HAS_IMP_CGAL
253 IMP_ALGEBRA_HAS_BOOST_FILESYSTEM = _IMP_core.IMP_ALGEBRA_HAS_BOOST_FILESYSTEM
254 IMP_ALGEBRA_HAS_BOOST_PROGRAMOPTIONS = _IMP_core.IMP_ALGEBRA_HAS_BOOST_PROGRAMOPTIONS
255 IMP_ALGEBRA_HAS_BOOST_RANDOM = _IMP_core.IMP_ALGEBRA_HAS_BOOST_RANDOM
256 IMP_ALGEBRA_HAS_BOOST_SYSTEM = _IMP_core.IMP_ALGEBRA_HAS_BOOST_SYSTEM
257 IMP_ALGEBRA_HAS_CGAL = _IMP_core.IMP_ALGEBRA_HAS_CGAL
258 IMP_ALGEBRA_HAS_ANN = _IMP_core.IMP_ALGEBRA_HAS_ANN
259 IMPALGEBRA_SHOW_WARNINGS = _IMP_core.IMPALGEBRA_SHOW_WARNINGS
260 import IMP.algebra
261 IMP_KERNEL_HAS_IMP_CGAL = _IMP_core.IMP_KERNEL_HAS_IMP_CGAL
262 IMP_KERNEL_HAS_BOOST_PROGRAMOPTIONS = _IMP_core.IMP_KERNEL_HAS_BOOST_PROGRAMOPTIONS
263 IMP_KERNEL_HAS_BOOST_RANDOM = _IMP_core.IMP_KERNEL_HAS_BOOST_RANDOM
264 IMP_KERNEL_HAS_BOOST_SYSTEM = _IMP_core.IMP_KERNEL_HAS_BOOST_SYSTEM
265 IMP_KERNEL_HAS_CGAL = _IMP_core.IMP_KERNEL_HAS_CGAL
266 IMPKERNEL_SHOW_WARNINGS = _IMP_core.IMPKERNEL_SHOW_WARNINGS
267 import IMP.kernel
268 IMP_DISPLAY_HAS_IMP_BASE = _IMP_core.IMP_DISPLAY_HAS_IMP_BASE
269 IMP_DISPLAY_HAS_IMP_CGAL = _IMP_core.IMP_DISPLAY_HAS_IMP_CGAL
270 IMP_DISPLAY_HAS_BOOST_FILESYSTEM = _IMP_core.IMP_DISPLAY_HAS_BOOST_FILESYSTEM
271 IMP_DISPLAY_HAS_BOOST_PROGRAMOPTIONS = _IMP_core.IMP_DISPLAY_HAS_BOOST_PROGRAMOPTIONS
272 IMP_DISPLAY_HAS_BOOST_RANDOM = _IMP_core.IMP_DISPLAY_HAS_BOOST_RANDOM
273 IMP_DISPLAY_HAS_BOOST_SYSTEM = _IMP_core.IMP_DISPLAY_HAS_BOOST_SYSTEM
274 IMP_DISPLAY_HAS_CGAL = _IMP_core.IMP_DISPLAY_HAS_CGAL
275 IMPDISPLAY_SHOW_WARNINGS = _IMP_core.IMPDISPLAY_SHOW_WARNINGS
276 import IMP.display
277 IMP_SCORE_FUNCTOR_HAS_IMP_CGAL = _IMP_core.IMP_SCORE_FUNCTOR_HAS_IMP_CGAL
278 IMP_SCORE_FUNCTOR_HAS_BOOST_FILESYSTEM = _IMP_core.IMP_SCORE_FUNCTOR_HAS_BOOST_FILESYSTEM
279 IMP_SCORE_FUNCTOR_HAS_BOOST_PROGRAMOPTIONS = _IMP_core.IMP_SCORE_FUNCTOR_HAS_BOOST_PROGRAMOPTIONS
280 IMP_SCORE_FUNCTOR_HAS_BOOST_RANDOM = _IMP_core.IMP_SCORE_FUNCTOR_HAS_BOOST_RANDOM
281 IMP_SCORE_FUNCTOR_HAS_BOOST_SYSTEM = _IMP_core.IMP_SCORE_FUNCTOR_HAS_BOOST_SYSTEM
282 IMP_SCORE_FUNCTOR_HAS_CGAL = _IMP_core.IMP_SCORE_FUNCTOR_HAS_CGAL
283 IMP_SCORE_FUNCTOR_HAS_HDF5 = _IMP_core.IMP_SCORE_FUNCTOR_HAS_HDF5
284 IMPSCOREFUNCTOR_SHOW_WARNINGS = _IMP_core.IMPSCOREFUNCTOR_SHOW_WARNINGS
285 import IMP.score_functor
286 IMP_CORE_HAS_IMP_BASE = _IMP_core.IMP_CORE_HAS_IMP_BASE
287 IMP_CORE_HAS_IMP_CGAL = _IMP_core.IMP_CORE_HAS_IMP_CGAL
288 IMP_CORE_HAS_IMP_KERNEL = _IMP_core.IMP_CORE_HAS_IMP_KERNEL
289 IMP_CORE_HAS_BOOST_FILESYSTEM = _IMP_core.IMP_CORE_HAS_BOOST_FILESYSTEM
290 IMP_CORE_HAS_BOOST_PROGRAMOPTIONS = _IMP_core.IMP_CORE_HAS_BOOST_PROGRAMOPTIONS
291 IMP_CORE_HAS_BOOST_RANDOM = _IMP_core.IMP_CORE_HAS_BOOST_RANDOM
292 IMP_CORE_HAS_BOOST_SYSTEM = _IMP_core.IMP_CORE_HAS_BOOST_SYSTEM
293 IMP_CORE_HAS_CGAL = _IMP_core.IMP_CORE_HAS_CGAL
294 IMP_CORE_HAS_HDF5 = _IMP_core.IMP_CORE_HAS_HDF5
295 IMPCORE_SHOW_WARNINGS = _IMP_core.IMPCORE_SHOW_WARNINGS
296 class _OpenCubicSplineBase(IMP.kernel.UnaryFunction):
297  """Proxy of C++ IMP::score_functor::ScoreUnaryFunction<(IMP::score_functor::OpenCubicSpline)> class"""
298  __swig_setmethods__ = {}
299  for _s in [IMP.kernel.UnaryFunction]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
300  __setattr__ = lambda self, name, value: _swig_setattr(self, _OpenCubicSplineBase, name, value)
301  __swig_getmethods__ = {}
302  for _s in [IMP.kernel.UnaryFunction]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
303  __getattr__ = lambda self, name: _swig_getattr(self, _OpenCubicSplineBase, name)
304  __repr__ = _swig_repr
305  def __init__(self, *args):
306  """
307  __init__(IMP::score_functor::ScoreUnaryFunction<(IMP::score_functor::OpenCubicSpline)> self, IMP::score_functor::OpenCubicSpline const & score, std::string name="UnaryFunction%1%") -> _OpenCubicSplineBase
308  __init__(IMP::score_functor::ScoreUnaryFunction<(IMP::score_functor::OpenCubicSpline)> self, IMP::score_functor::OpenCubicSpline const & score) -> _OpenCubicSplineBase
309  """
310  this = _IMP_core.new__OpenCubicSplineBase(*args)
311  try: self.this.append(this)
312  except: self.this = this
313  def get_version_info(self):
314  """get_version_info(_OpenCubicSplineBase self) -> VersionInfo"""
315  return _IMP_core._OpenCubicSplineBase_get_version_info(self)
316 
317 _OpenCubicSplineBase_swigregister = _IMP_core._OpenCubicSplineBase_swigregister
318 _OpenCubicSplineBase_swigregister(_OpenCubicSplineBase)
319 
320 _object_types.append("MonteCarloMover")
321 
322 
323 def _object_cast_to_MonteCarloMover(*args):
324  """_object_cast_to_MonteCarloMover(Object o) -> MonteCarloMover"""
325  return _IMP_core._object_cast_to_MonteCarloMover(*args)
326 MonteCarloMoverResults=list
327 _plural_types.append("MonteCarloMoverResults")
328 _value_types.append("MonteCarloMoverResult")
329 
330 _object_types.append("AngleRestraint")
331 
332 
333 def _object_cast_to_AngleRestraint(*args):
334  """_object_cast_to_AngleRestraint(Object o) -> AngleRestraint"""
335  return _IMP_core._object_cast_to_AngleRestraint(*args)
336 _object_types.append("AngleTripletScore")
337 
338 
339 def _object_cast_to_AngleTripletScore(*args):
340  """_object_cast_to_AngleTripletScore(Object o) -> AngleTripletScore"""
341  return _IMP_core._object_cast_to_AngleTripletScore(*args)
342 _object_types.append("AttributeSingletonScore")
343 
344 
345 def _object_cast_to_AttributeSingletonScore(*args):
346  """_object_cast_to_AttributeSingletonScore(Object o) -> AttributeSingletonScore"""
347  return _IMP_core._object_cast_to_AttributeSingletonScore(*args)
348 _object_types.append("BallMover")
349 
350 
351 def _object_cast_to_BallMover(*args):
352  """_object_cast_to_BallMover(Object o) -> BallMover"""
353  return _IMP_core._object_cast_to_BallMover(*args)
354 _object_types.append("SerialMover")
355 
356 
357 def _object_cast_to_SerialMover(*args):
358  """_object_cast_to_SerialMover(Object o) -> SerialMover"""
359  return _IMP_core._object_cast_to_SerialMover(*args)
360 _object_types.append("BoundingBox3DSingletonScore")
361 
362 
363 def _object_cast_to_BoundingBox3DSingletonScore(*args):
364  """_object_cast_to_BoundingBox3DSingletonScore(Object o) -> BoundingBox3DSingletonScore"""
365  return _IMP_core._object_cast_to_BoundingBox3DSingletonScore(*args)
366 _object_types.append("BoxSweepClosePairsFinder")
367 
368 
369 def _object_cast_to_BoxSweepClosePairsFinder(*args):
370  """_object_cast_to_BoxSweepClosePairsFinder(Object o) -> BoxSweepClosePairsFinder"""
371  return _IMP_core._object_cast_to_BoxSweepClosePairsFinder(*args)
372 _object_types.append("NearestNeighborsClosePairsFinder")
373 
374 
375 def _object_cast_to_NearestNeighborsClosePairsFinder(*args):
376  """_object_cast_to_NearestNeighborsClosePairsFinder(Object o) -> NearestNeighborsClosePairsFinder"""
377  return _IMP_core._object_cast_to_NearestNeighborsClosePairsFinder(*args)
378 _object_types.append("CentroidOfRefined")
379 
380 
381 def _object_cast_to_CentroidOfRefined(*args):
382  """_object_cast_to_CentroidOfRefined(Object o) -> CentroidOfRefined"""
383  return _IMP_core._object_cast_to_CentroidOfRefined(*args)
384 _object_types.append("ChecksScoreState")
385 
386 
387 def _object_cast_to_ChecksScoreState(*args):
388  """_object_cast_to_ChecksScoreState(Object o) -> ChecksScoreState"""
389  return _IMP_core._object_cast_to_ChecksScoreState(*args)
390 _object_types.append("ChildrenRefiner")
391 
392 
393 def _object_cast_to_ChildrenRefiner(*args):
394  """_object_cast_to_ChildrenRefiner(Object o) -> ChildrenRefiner"""
395  return _IMP_core._object_cast_to_ChildrenRefiner(*args)
396 _object_types.append("ClosePairsFinder")
397 
398 
399 def _object_cast_to_ClosePairsFinder(*args):
400  """_object_cast_to_ClosePairsFinder(Object o) -> ClosePairsFinder"""
401  return _IMP_core._object_cast_to_ClosePairsFinder(*args)
402 _object_types.append("ClosePairsPairScore")
403 
404 
405 def _object_cast_to_ClosePairsPairScore(*args):
406  """_object_cast_to_ClosePairsPairScore(Object o) -> ClosePairsPairScore"""
407  return _IMP_core._object_cast_to_ClosePairsPairScore(*args)
408 _object_types.append("ClosedCubicSpline")
409 
410 
411 def _object_cast_to_ClosedCubicSpline(*args):
412  """_object_cast_to_ClosedCubicSpline(Object o) -> ClosedCubicSpline"""
413  return _IMP_core._object_cast_to_ClosedCubicSpline(*args)
414 _object_types.append("ConjugateGradients")
415 
416 
417 def _object_cast_to_ConjugateGradients(*args):
418  """_object_cast_to_ConjugateGradients(Object o) -> ConjugateGradients"""
419  return _IMP_core._object_cast_to_ConjugateGradients(*args)
420 _object_types.append("ConnectivityRestraint")
421 
422 
423 def _object_cast_to_ConnectivityRestraint(*args):
424  """_object_cast_to_ConnectivityRestraint(Object o) -> ConnectivityRestraint"""
425  return _IMP_core._object_cast_to_ConnectivityRestraint(*args)
426 _object_types.append("ConstantRestraint")
427 
428 
429 def _object_cast_to_ConstantRestraint(*args):
430  """_object_cast_to_ConstantRestraint(Object o) -> ConstantRestraint"""
431  return _IMP_core._object_cast_to_ConstantRestraint(*args)
432 _object_types.append("Cosine")
433 
434 
435 def _object_cast_to_Cosine(*args):
436  """_object_cast_to_Cosine(Object o) -> Cosine"""
437  return _IMP_core._object_cast_to_Cosine(*args)
438 _object_types.append("CoverRefined")
439 
440 
441 def _object_cast_to_CoverRefined(*args):
442  """_object_cast_to_CoverRefined(Object o) -> CoverRefined"""
443  return _IMP_core._object_cast_to_CoverRefined(*args)
444 _object_types.append("DerivativesFromRefined")
445 
446 
447 def _object_cast_to_DerivativesFromRefined(*args):
448  """_object_cast_to_DerivativesFromRefined(Object o) -> DerivativesFromRefined"""
449  return _IMP_core._object_cast_to_DerivativesFromRefined(*args)
450 _object_types.append("DerivativesToRefined")
451 
452 
453 def _object_cast_to_DerivativesToRefined(*args):
454  """_object_cast_to_DerivativesToRefined(Object o) -> DerivativesToRefined"""
455  return _IMP_core._object_cast_to_DerivativesToRefined(*args)
456 _object_types.append("WeightedDerivativesToRefined")
457 
458 
459 def _object_cast_to_WeightedDerivativesToRefined(*args):
460  """_object_cast_to_WeightedDerivativesToRefined(Object o) -> IMP::core::WeightedDerivativesToRefined *"""
461  return _IMP_core._object_cast_to_WeightedDerivativesToRefined(*args)
462 _object_types.append("DiameterRestraint")
463 
464 
465 def _object_cast_to_DiameterRestraint(*args):
466  """_object_cast_to_DiameterRestraint(Object o) -> DiameterRestraint"""
467  return _IMP_core._object_cast_to_DiameterRestraint(*args)
468 _object_types.append("DihedralRestraint")
469 
470 
471 def _object_cast_to_DihedralRestraint(*args):
472  """_object_cast_to_DihedralRestraint(Object o) -> DihedralRestraint"""
473  return _IMP_core._object_cast_to_DihedralRestraint(*args)
474 _object_types.append("DistanceRestraint")
475 
476 
477 def _object_cast_to_DistanceRestraint(*args):
478  """_object_cast_to_DistanceRestraint(Object o) -> DistanceRestraint"""
479  return _IMP_core._object_cast_to_DistanceRestraint(*args)
480 _object_types.append("DistanceToSingletonScore")
481 
482 
483 def _object_cast_to_DistanceToSingletonScore(*args):
484  """_object_cast_to_DistanceToSingletonScore(Object o) -> DistanceToSingletonScore"""
485  return _IMP_core._object_cast_to_DistanceToSingletonScore(*args)
486 _object_types.append("ExcludedVolumeRestraint")
487 
488 
489 def _object_cast_to_ExcludedVolumeRestraint(*args):
490  """_object_cast_to_ExcludedVolumeRestraint(Object o) -> ExcludedVolumeRestraint"""
491  return _IMP_core._object_cast_to_ExcludedVolumeRestraint(*args)
492 _object_types.append("FixedRefiner")
493 
494 
495 def _object_cast_to_FixedRefiner(*args):
496  """_object_cast_to_FixedRefiner(Object o) -> FixedRefiner"""
497  return _IMP_core._object_cast_to_FixedRefiner(*args)
498 _object_types.append("GridClosePairsFinder")
499 
500 
501 def _object_cast_to_GridClosePairsFinder(*args):
502  """_object_cast_to_GridClosePairsFinder(Object o) -> GridClosePairsFinder"""
503  return _IMP_core._object_cast_to_GridClosePairsFinder(*args)
504 _object_types.append("Harmonic")
505 
506 
507 def _object_cast_to_Harmonic(*args):
508  """_object_cast_to_Harmonic(Object o) -> Harmonic"""
509  return _IMP_core._object_cast_to_Harmonic(*args)
510 _object_types.append("HarmonicWell")
511 
512 
513 def _object_cast_to_HarmonicWell(*args):
514  """_object_cast_to_HarmonicWell(Object o) -> HarmonicWell"""
515  return _IMP_core._object_cast_to_HarmonicWell(*args)
516 _object_types.append("HarmonicLowerBound")
517 
518 
519 def _object_cast_to_HarmonicLowerBound(*args):
520  """_object_cast_to_HarmonicLowerBound(Object o) -> HarmonicLowerBound"""
521  return _IMP_core._object_cast_to_HarmonicLowerBound(*args)
522 _object_types.append("HarmonicUpperBound")
523 
524 
525 def _object_cast_to_HarmonicUpperBound(*args):
526  """_object_cast_to_HarmonicUpperBound(Object o) -> HarmonicUpperBound"""
527  return _IMP_core._object_cast_to_HarmonicUpperBound(*args)
528 _object_types.append("HarmonicSphereDistancePairScore")
529 
530 
531 def _object_cast_to_HarmonicSphereDistancePairScore(*args):
532  """_object_cast_to_HarmonicSphereDistancePairScore(Object o) -> HarmonicSphereDistancePairScore"""
533  return _IMP_core._object_cast_to_HarmonicSphereDistancePairScore(*args)
534 _object_types.append("HarmonicUpperBoundSphereDistancePairScore")
535 
536 
537 def _object_cast_to_HarmonicUpperBoundSphereDistancePairScore(*args):
538  """_object_cast_to_HarmonicUpperBoundSphereDistancePairScore(Object o) -> HarmonicUpperBoundSphereDistancePairScore"""
539  return _IMP_core._object_cast_to_HarmonicUpperBoundSphereDistancePairScore(*args)
540 _object_types.append("HarmonicUpperBoundSphereDiameterPairScore")
541 
542 
543 def _object_cast_to_HarmonicUpperBoundSphereDiameterPairScore(*args):
544  """_object_cast_to_HarmonicUpperBoundSphereDiameterPairScore(Object o) -> HarmonicUpperBoundSphereDiameterPairScore"""
545  return _IMP_core._object_cast_to_HarmonicUpperBoundSphereDiameterPairScore(*args)
546 _object_types.append("IncrementalScoringFunction")
547 
548 
549 def _object_cast_to_IncrementalScoringFunction(*args):
550  """_object_cast_to_IncrementalScoringFunction(Object o) -> IncrementalScoringFunction"""
551  return _IMP_core._object_cast_to_IncrementalScoringFunction(*args)
552 _object_types.append("KClosePairsPairScore")
553 
554 
555 def _object_cast_to_KClosePairsPairScore(*args):
556  """_object_cast_to_KClosePairsPairScore(Object o) -> KClosePairsPairScore"""
557  return _IMP_core._object_cast_to_KClosePairsPairScore(*args)
558 _object_types.append("LeavesRefiner")
559 
560 
561 def _object_cast_to_LeavesRefiner(*args):
562  """_object_cast_to_LeavesRefiner(Object o) -> LeavesRefiner"""
563  return _IMP_core._object_cast_to_LeavesRefiner(*args)
564 _object_types.append("Linear")
565 
566 
567 def _object_cast_to_Linear(*args):
568  """_object_cast_to_Linear(Object o) -> Linear"""
569  return _IMP_core._object_cast_to_Linear(*args)
570 _object_types.append("MCCGSampler")
571 
572 
573 def _object_cast_to_MCCGSampler(*args):
574  """_object_cast_to_MCCGSampler(Object o) -> MCCGSampler"""
575  return _IMP_core._object_cast_to_MCCGSampler(*args)
576 _object_types.append("MonteCarlo")
577 
578 
579 def _object_cast_to_MonteCarlo(*args):
580  """_object_cast_to_MonteCarlo(Object o) -> MonteCarlo"""
581  return _IMP_core._object_cast_to_MonteCarlo(*args)
582 _object_types.append("MonteCarloWithLocalOptimization")
583 
584 
585 def _object_cast_to_MonteCarloWithLocalOptimization(*args):
586  """_object_cast_to_MonteCarloWithLocalOptimization(Object o) -> MonteCarloWithLocalOptimization"""
587  return _IMP_core._object_cast_to_MonteCarloWithLocalOptimization(*args)
588 _object_types.append("MonteCarloWithBasinHopping")
589 
590 
591 def _object_cast_to_MonteCarloWithBasinHopping(*args):
592  """_object_cast_to_MonteCarloWithBasinHopping(Object o) -> MonteCarloWithBasinHopping"""
593  return _IMP_core._object_cast_to_MonteCarloWithBasinHopping(*args)
594 _object_types.append("MSConnectivityRestraint")
595 
596 
597 def _object_cast_to_MSConnectivityRestraint(*args):
598  """_object_cast_to_MSConnectivityRestraint(Object o) -> MSConnectivityRestraint"""
599  return _IMP_core._object_cast_to_MSConnectivityRestraint(*args)
600 _object_types.append("NeighborsTable")
601 
602 
603 def _object_cast_to_NeighborsTable(*args):
604  """_object_cast_to_NeighborsTable(Object o) -> NeighborsTable"""
605  return _IMP_core._object_cast_to_NeighborsTable(*args)
606 _object_types.append("NormalMover")
607 
608 
609 def _object_cast_to_NormalMover(*args):
610  """_object_cast_to_NormalMover(Object o) -> NormalMover"""
611  return _IMP_core._object_cast_to_NormalMover(*args)
612 _object_types.append("NormalizedSphereDistancePairScore")
613 
614 
615 def _object_cast_to_NormalizedSphereDistancePairScore(*args):
616  """_object_cast_to_NormalizedSphereDistancePairScore(Object o) -> NormalizedSphereDistancePairScore"""
617  return _IMP_core._object_cast_to_NormalizedSphereDistancePairScore(*args)
618 _object_types.append("OpenCubicSpline")
619 
620 
621 def _object_cast_to_OpenCubicSpline(*args):
622  """_object_cast_to_OpenCubicSpline(Object o) -> OpenCubicSpline"""
623  return _IMP_core._object_cast_to_OpenCubicSpline(*args)
624 _object_types.append("PairConstraint")
625 
626 
627 def _object_cast_to_PairConstraint(*args):
628  """_object_cast_to_PairConstraint(Object o) -> PairConstraint"""
629  return _IMP_core._object_cast_to_PairConstraint(*args)
630 _object_types.append("PairRestraint")
631 
632 
633 def _object_cast_to_PairRestraint(*args):
634  """_object_cast_to_PairRestraint(Object o) -> PairRestraint"""
635  return _IMP_core._object_cast_to_PairRestraint(*args)
636 _object_types.append("QuadConstraint")
637 
638 
639 def _object_cast_to_QuadConstraint(*args):
640  """_object_cast_to_QuadConstraint(Object o) -> QuadConstraint"""
641  return _IMP_core._object_cast_to_QuadConstraint(*args)
642 _object_types.append("QuadRestraint")
643 
644 
645 def _object_cast_to_QuadRestraint(*args):
646  """_object_cast_to_QuadRestraint(Object o) -> QuadRestraint"""
647  return _IMP_core._object_cast_to_QuadRestraint(*args)
648 _object_types.append("QuadraticClosePairsFinder")
649 
650 
651 def _object_cast_to_QuadraticClosePairsFinder(*args):
652  """_object_cast_to_QuadraticClosePairsFinder(Object o) -> QuadraticClosePairsFinder"""
653  return _IMP_core._object_cast_to_QuadraticClosePairsFinder(*args)
654 _object_types.append("RefinedPairsPairScore")
655 
656 
657 def _object_cast_to_RefinedPairsPairScore(*args):
658  """_object_cast_to_RefinedPairsPairScore(Object o) -> RefinedPairsPairScore"""
659  return _IMP_core._object_cast_to_RefinedPairsPairScore(*args)
660 _object_types.append("RestraintsScoringFunction")
661 
662 
663 def _object_cast_to_RestraintsScoringFunction(*args):
664  """_object_cast_to_RestraintsScoringFunction(Object o) -> RestraintsScoringFunction"""
665  return _IMP_core._object_cast_to_RestraintsScoringFunction(*args)
666 _object_types.append("RigidBodyDistancePairScore")
667 
668 
669 def _object_cast_to_RigidBodyDistancePairScore(*args):
670  """_object_cast_to_RigidBodyDistancePairScore(Object o) -> RigidBodyDistancePairScore"""
671  return _IMP_core._object_cast_to_RigidBodyDistancePairScore(*args)
672 _object_types.append("RigidBodyMover")
673 
674 
675 def _object_cast_to_RigidBodyMover(*args):
676  """_object_cast_to_RigidBodyMover(Object o) -> RigidBodyMover"""
677  return _IMP_core._object_cast_to_RigidBodyMover(*args)
678 _object_types.append("RigidBodyTunneler")
679 
680 
681 def _object_cast_to_RigidBodyTunneler(*args):
682  """_object_cast_to_RigidBodyTunneler(Object o) -> RigidBodyTunneler"""
683  return _IMP_core._object_cast_to_RigidBodyTunneler(*args)
684 _object_types.append("RigidBodyUmbrella")
685 
686 
687 def _object_cast_to_RigidBodyUmbrella(*args):
688  """_object_cast_to_RigidBodyUmbrella(Object o) -> RigidBodyUmbrella"""
689  return _IMP_core._object_cast_to_RigidBodyUmbrella(*args)
690 _object_types.append("RigidClosePairsFinder")
691 
692 
693 def _object_cast_to_RigidClosePairsFinder(*args):
694  """_object_cast_to_RigidClosePairsFinder(Object o) -> RigidClosePairsFinder"""
695  return _IMP_core._object_cast_to_RigidClosePairsFinder(*args)
696 _object_types.append("RigidMembersRefiner")
697 
698 
699 def _object_cast_to_RigidMembersRefiner(*args):
700  """_object_cast_to_RigidMembersRefiner(Object o) -> RigidMembersRefiner"""
701  return _IMP_core._object_cast_to_RigidMembersRefiner(*args)
702 _object_types.append("SingletonConstraint")
703 
704 
705 def _object_cast_to_SingletonConstraint(*args):
706  """_object_cast_to_SingletonConstraint(Object o) -> SingletonConstraint"""
707  return _IMP_core._object_cast_to_SingletonConstraint(*args)
708 _object_types.append("SingletonRestraint")
709 
710 
711 def _object_cast_to_SingletonRestraint(*args):
712  """_object_cast_to_SingletonRestraint(Object o) -> SingletonRestraint"""
713  return _IMP_core._object_cast_to_SingletonRestraint(*args)
714 _object_types.append("SoftSpherePairScore")
715 
716 
717 def _object_cast_to_SoftSpherePairScore(*args):
718  """_object_cast_to_SoftSpherePairScore(Object o) -> SoftSpherePairScore"""
719  return _IMP_core._object_cast_to_SoftSpherePairScore(*args)
720 _object_types.append("SphereDistancePairScore")
721 
722 
723 def _object_cast_to_SphereDistancePairScore(*args):
724  """_object_cast_to_SphereDistancePairScore(Object o) -> SphereDistancePairScore"""
725  return _IMP_core._object_cast_to_SphereDistancePairScore(*args)
726 _object_types.append("SphereDistanceToSingletonScore")
727 
728 
729 def _object_cast_to_SphereDistanceToSingletonScore(*args):
730  """_object_cast_to_SphereDistanceToSingletonScore(Object o) -> SphereDistanceToSingletonScore"""
731  return _IMP_core._object_cast_to_SphereDistanceToSingletonScore(*args)
732 _object_types.append("SteepestDescent")
733 
734 
735 def _object_cast_to_SteepestDescent(*args):
736  """_object_cast_to_SteepestDescent(Object o) -> SteepestDescent"""
737  return _IMP_core._object_cast_to_SteepestDescent(*args)
738 _object_types.append("TableRefiner")
739 
740 
741 def _object_cast_to_TableRefiner(*args):
742  """_object_cast_to_TableRefiner(Object o) -> TableRefiner"""
743  return _IMP_core._object_cast_to_TableRefiner(*args)
744 _object_types.append("Transform")
745 
746 
747 def _object_cast_to_Transform(*args):
748  """_object_cast_to_Transform(Object o) -> Transform"""
749  return _IMP_core._object_cast_to_Transform(*args)
750 _object_types.append("TransformationAndReflectionSymmetry")
751 
752 
753 def _object_cast_to_TransformationAndReflectionSymmetry(*args):
754  """_object_cast_to_TransformationAndReflectionSymmetry(Object o) -> TransformationAndReflectionSymmetry"""
755  return _IMP_core._object_cast_to_TransformationAndReflectionSymmetry(*args)
756 _object_types.append("TransformationSymmetry")
757 
758 
759 def _object_cast_to_TransformationSymmetry(*args):
760  """_object_cast_to_TransformationSymmetry(Object o) -> TransformationSymmetry"""
761  return _IMP_core._object_cast_to_TransformationSymmetry(*args)
762 _object_types.append("TransformedDistancePairScore")
763 
764 
765 def _object_cast_to_TransformedDistancePairScore(*args):
766  """_object_cast_to_TransformedDistancePairScore(Object o) -> TransformedDistancePairScore"""
767  return _IMP_core._object_cast_to_TransformedDistancePairScore(*args)
768 _object_types.append("TripletConstraint")
769 
770 
771 def _object_cast_to_TripletConstraint(*args):
772  """_object_cast_to_TripletConstraint(Object o) -> TripletConstraint"""
773  return _IMP_core._object_cast_to_TripletConstraint(*args)
774 _object_types.append("TripletRestraint")
775 
776 
777 def _object_cast_to_TripletRestraint(*args):
778  """_object_cast_to_TripletRestraint(Object o) -> TripletRestraint"""
779  return _IMP_core._object_cast_to_TripletRestraint(*args)
780 _object_types.append("TypedPairScore")
781 
782 
783 def _object_cast_to_TypedPairScore(*args):
784  """_object_cast_to_TypedPairScore(Object o) -> TypedPairScore"""
785  return _IMP_core._object_cast_to_TypedPairScore(*args)
786 _object_types.append("VolumeRestraint")
787 
788 
789 def _object_cast_to_VolumeRestraint(*args):
790  """_object_cast_to_VolumeRestraint(Object o) -> VolumeRestraint"""
791  return _IMP_core._object_cast_to_VolumeRestraint(*args)
792 _object_types.append("WeightedSphereDistancePairScore")
793 
794 
795 def _object_cast_to_WeightedSphereDistancePairScore(*args):
796  """_object_cast_to_WeightedSphereDistancePairScore(Object o) -> WeightedSphereDistancePairScore"""
797  return _IMP_core._object_cast_to_WeightedSphereDistancePairScore(*args)
798 _object_types.append("MoveStatisticsScoreState")
799 
800 
801 def _object_cast_to_MoveStatisticsScoreState(*args):
802  """_object_cast_to_MoveStatisticsScoreState(Object o) -> MoveStatisticsScoreState"""
803  return _IMP_core._object_cast_to_MoveStatisticsScoreState(*args)
804 _object_types.append("MinimumRestraint")
805 
806 
807 def _object_cast_to_MinimumRestraint(*args):
808  """_object_cast_to_MinimumRestraint(Object o) -> MinimumRestraint"""
809  return _IMP_core._object_cast_to_MinimumRestraint(*args)
810 _object_types.append("WriteRestraintScoresOptimizerState")
811 
812 
813 def _object_cast_to_WriteRestraintScoresOptimizerState(*args):
814  """_object_cast_to_WriteRestraintScoresOptimizerState(Object o) -> WriteRestraintScoresOptimizerState"""
815  return _IMP_core._object_cast_to_WriteRestraintScoresOptimizerState(*args)
816 _object_types.append("ConstantSingletonPredicate")
817 
818 
819 def _object_cast_to_ConstantSingletonPredicate(*args):
820  """_object_cast_to_ConstantSingletonPredicate(Object o) -> ConstantSingletonPredicate"""
821  return _IMP_core._object_cast_to_ConstantSingletonPredicate(*args)
822 _object_types.append("ConstantPairPredicate")
823 
824 
825 def _object_cast_to_ConstantPairPredicate(*args):
826  """_object_cast_to_ConstantPairPredicate(Object o) -> ConstantPairPredicate"""
827  return _IMP_core._object_cast_to_ConstantPairPredicate(*args)
828 _object_types.append("ConstantTripletPredicate")
829 
830 
831 def _object_cast_to_ConstantTripletPredicate(*args):
832  """_object_cast_to_ConstantTripletPredicate(Object o) -> ConstantTripletPredicate"""
833  return _IMP_core._object_cast_to_ConstantTripletPredicate(*args)
834 _object_types.append("ConstantQuadPredicate")
835 
836 
837 def _object_cast_to_ConstantQuadPredicate(*args):
838  """_object_cast_to_ConstantQuadPredicate(Object o) -> ConstantQuadPredicate"""
839  return _IMP_core._object_cast_to_ConstantQuadPredicate(*args)
840 _object_types.append("CoinFlipSingletonPredicate")
841 
842 
843 def _object_cast_to_CoinFlipSingletonPredicate(*args):
844  """_object_cast_to_CoinFlipSingletonPredicate(Object o) -> CoinFlipSingletonPredicate"""
845  return _IMP_core._object_cast_to_CoinFlipSingletonPredicate(*args)
846 _object_types.append("CoinFlipPairPredicate")
847 
848 
849 def _object_cast_to_CoinFlipPairPredicate(*args):
850  """_object_cast_to_CoinFlipPairPredicate(Object o) -> CoinFlipPairPredicate"""
851  return _IMP_core._object_cast_to_CoinFlipPairPredicate(*args)
852 _object_types.append("CoinFlipTripletPredicate")
853 
854 
855 def _object_cast_to_CoinFlipTripletPredicate(*args):
856  """_object_cast_to_CoinFlipTripletPredicate(Object o) -> CoinFlipTripletPredicate"""
857  return _IMP_core._object_cast_to_CoinFlipTripletPredicate(*args)
858 _object_types.append("CoinFlipQuadPredicate")
859 
860 
861 def _object_cast_to_CoinFlipQuadPredicate(*args):
862  """_object_cast_to_CoinFlipQuadPredicate(Object o) -> CoinFlipQuadPredicate"""
863  return _IMP_core._object_cast_to_CoinFlipQuadPredicate(*args)
864 _object_types.append("UnorderedTypeSingletonPredicate")
865 
866 
867 def _object_cast_to_UnorderedTypeSingletonPredicate(*args):
868  """_object_cast_to_UnorderedTypeSingletonPredicate(Object o) -> UnorderedTypeSingletonPredicate"""
869  return _IMP_core._object_cast_to_UnorderedTypeSingletonPredicate(*args)
870 _object_types.append("UnorderedTypePairPredicate")
871 
872 
873 def _object_cast_to_UnorderedTypePairPredicate(*args):
874  """_object_cast_to_UnorderedTypePairPredicate(Object o) -> UnorderedTypePairPredicate"""
875  return _IMP_core._object_cast_to_UnorderedTypePairPredicate(*args)
876 _object_types.append("UnorderedTypeTripletPredicate")
877 
878 
879 def _object_cast_to_UnorderedTypeTripletPredicate(*args):
880  """_object_cast_to_UnorderedTypeTripletPredicate(Object o) -> UnorderedTypeTripletPredicate"""
881  return _IMP_core._object_cast_to_UnorderedTypeTripletPredicate(*args)
882 _object_types.append("UnorderedTypeQuadPredicate")
883 
884 
885 def _object_cast_to_UnorderedTypeQuadPredicate(*args):
886  """_object_cast_to_UnorderedTypeQuadPredicate(Object o) -> UnorderedTypeQuadPredicate"""
887  return _IMP_core._object_cast_to_UnorderedTypeQuadPredicate(*args)
888 _object_types.append("OrderedTypeSingletonPredicate")
889 
890 
891 def _object_cast_to_OrderedTypeSingletonPredicate(*args):
892  """_object_cast_to_OrderedTypeSingletonPredicate(Object o) -> OrderedTypeSingletonPredicate"""
893  return _IMP_core._object_cast_to_OrderedTypeSingletonPredicate(*args)
894 _object_types.append("OrderedTypePairPredicate")
895 
896 
897 def _object_cast_to_OrderedTypePairPredicate(*args):
898  """_object_cast_to_OrderedTypePairPredicate(Object o) -> OrderedTypePairPredicate"""
899  return _IMP_core._object_cast_to_OrderedTypePairPredicate(*args)
900 _object_types.append("OrderedTypeTripletPredicate")
901 
902 
903 def _object_cast_to_OrderedTypeTripletPredicate(*args):
904  """_object_cast_to_OrderedTypeTripletPredicate(Object o) -> OrderedTypeTripletPredicate"""
905  return _IMP_core._object_cast_to_OrderedTypeTripletPredicate(*args)
906 _object_types.append("OrderedTypeQuadPredicate")
907 
908 
909 def _object_cast_to_OrderedTypeQuadPredicate(*args):
910  """_object_cast_to_OrderedTypeQuadPredicate(Object o) -> OrderedTypeQuadPredicate"""
911  return _IMP_core._object_cast_to_OrderedTypeQuadPredicate(*args)
912 _object_types.append("AllSameSingletonPredicate")
913 
914 
915 def _object_cast_to_AllSameSingletonPredicate(*args):
916  """_object_cast_to_AllSameSingletonPredicate(Object o) -> AllSameSingletonPredicate"""
917  return _IMP_core._object_cast_to_AllSameSingletonPredicate(*args)
918 _object_types.append("AllSamePairPredicate")
919 
920 
921 def _object_cast_to_AllSamePairPredicate(*args):
922  """_object_cast_to_AllSamePairPredicate(Object o) -> AllSamePairPredicate"""
923  return _IMP_core._object_cast_to_AllSamePairPredicate(*args)
924 _object_types.append("AllSameTripletPredicate")
925 
926 
927 def _object_cast_to_AllSameTripletPredicate(*args):
928  """_object_cast_to_AllSameTripletPredicate(Object o) -> AllSameTripletPredicate"""
929  return _IMP_core._object_cast_to_AllSameTripletPredicate(*args)
930 _object_types.append("AllSameQuadPredicate")
931 
932 
933 def _object_cast_to_AllSameQuadPredicate(*args):
934  """_object_cast_to_AllSameQuadPredicate(Object o) -> AllSameQuadPredicate"""
935  return _IMP_core._object_cast_to_AllSameQuadPredicate(*args)
936 def XYZs(l=[]):
937  return [XYZ(x) for x in l]
938 _plural_types.append("XYZs")
939 
940 _value_types.append("XYZ")
941 
942 def XYZRs(l=[]):
943  return [XYZR(x) for x in l]
944 _plural_types.append("XYZRs")
945 
946 _value_types.append("XYZR")
947 
948 def RigidBodies(l=[]):
949  return [RigidBody(x) for x in l]
950 _plural_types.append("RigidBodies")
951 
952 _value_types.append("RigidBody")
953 
954 def RigidBodyMembers(l=[]):
955  return [RigidBodyMember(x) for x in l]
956 _plural_types.append("RigidBodyMembers")
957 
958 _value_types.append("RigidBodyMember")
959 
960 def RigidMembers(l=[]):
961  return [RigidMember(x) for x in l]
962 _plural_types.append("RigidMembers")
963 
964 _value_types.append("RigidMember")
965 
966 def NonRigidMembers(l=[]):
967  return [NonRigidMember(x) for x in l]
968 _plural_types.append("NonRigidMembers")
969 
970 _value_types.append("NonRigidMember")
971 
972 def Centroids(l=[]):
973  return [Centroid(x) for x in l]
974 _plural_types.append("Centroids")
975 
976 _value_types.append("Centroid")
977 
978 def Covers(l=[]):
979  return [Cover(x) for x in l]
980 _plural_types.append("Covers")
981 
982 _value_types.append("Cover")
983 
984 def References(l=[]):
985  return [Reference(x) for x in l]
986 _plural_types.append("References")
987 
988 _value_types.append("Reference")
989 
990 ParticleTypes=list
991 _plural_types.append("ParticleTypes")
992 _value_types.append("ParticleType")
993 
994 def Typeds(l=[]):
995  return [Typed(x) for x in l]
996 _plural_types.append("Typeds")
997 
998 _value_types.append("Typed")
999 
1000 def GenericHierarchies(l=[]):
1001  return [Hierarchy(x) for x in l]
1002 _plural_types.append("GenericHierarchies")
1003 
1004 _value_types.append("Hierarchy")
1005 
1006 def Gaussians(l=[]):
1007  return [Gaussian(x) for x in l]
1008 _plural_types.append("Gaussians")
1009 
1010 _value_types.append("Gaussian")
1011 
1012 HierarchyCounters=list
1013 _plural_types.append("HierarchyCounters")
1014 _value_types.append("HierarchyCounter")
1015 
1016 HierarchyTraitsList=list
1017 _plural_types.append("HierarchyTraitsList")
1018 _value_types.append("HierarchyTraits")
1019 
1020 _object_types.append("TruncatedHarmonicBound")
1021 
1022 
1023 def _object_cast_to_TruncatedHarmonicBound(*args):
1024  """_object_cast_to_TruncatedHarmonicBound(Object o) -> TruncatedHarmonicBound"""
1025  return _IMP_core._object_cast_to_TruncatedHarmonicBound(*args)
1026 _object_types.append("TruncatedHarmonicLowerBound")
1027 
1028 
1029 def _object_cast_to_TruncatedHarmonicLowerBound(*args):
1030  """_object_cast_to_TruncatedHarmonicLowerBound(Object o) -> TruncatedHarmonicLowerBound"""
1031  return _IMP_core._object_cast_to_TruncatedHarmonicLowerBound(*args)
1032 _object_types.append("TruncatedHarmonicUpperBound")
1033 
1034 
1035 def _object_cast_to_TruncatedHarmonicUpperBound(*args):
1036  """_object_cast_to_TruncatedHarmonicUpperBound(Object o) -> TruncatedHarmonicUpperBound"""
1037  return _IMP_core._object_cast_to_TruncatedHarmonicUpperBound(*args)
1038 _object_types.append("HarmonicDistancePairScore")
1039 
1040 
1041 def _object_cast_to_HarmonicDistancePairScore(*args):
1042  """_object_cast_to_HarmonicDistancePairScore(Object o) -> HarmonicDistancePairScore"""
1043  return _IMP_core._object_cast_to_HarmonicDistancePairScore(*args)
1044 _object_types.append("DistancePairScore")
1045 
1046 
1047 def _object_cast_to_DistancePairScore(*args):
1048  """_object_cast_to_DistancePairScore(Object o) -> DistancePairScore"""
1049  return _IMP_core._object_cast_to_DistancePairScore(*args)
1050 _object_types.append("XYZRGeometry")
1051 
1052 
1053 def _object_cast_to_XYZRGeometry(*args):
1054  """_object_cast_to_XYZRGeometry(Object o) -> XYZRGeometry"""
1055  return _IMP_core._object_cast_to_XYZRGeometry(*args)
1056 _object_types.append("XYZRsGeometry")
1057 
1058 
1059 def _object_cast_to_XYZRsGeometry(*args):
1060  """_object_cast_to_XYZRsGeometry(Object o) -> XYZRsGeometry"""
1061  return _IMP_core._object_cast_to_XYZRsGeometry(*args)
1062 _object_types.append("XYZDerivativeGeometry")
1063 
1064 
1065 def _object_cast_to_XYZDerivativeGeometry(*args):
1066  """_object_cast_to_XYZDerivativeGeometry(Object o) -> XYZDerivativeGeometry"""
1067  return _IMP_core._object_cast_to_XYZDerivativeGeometry(*args)
1068 _object_types.append("XYZDerivativesGeometry")
1069 
1070 
1071 def _object_cast_to_XYZDerivativesGeometry(*args):
1072  """_object_cast_to_XYZDerivativesGeometry(Object o) -> XYZDerivativesGeometry"""
1073  return _IMP_core._object_cast_to_XYZDerivativesGeometry(*args)
1074 _object_types.append("RigidBodyDerivativeGeometry")
1075 
1076 
1077 def _object_cast_to_RigidBodyDerivativeGeometry(*args):
1078  """_object_cast_to_RigidBodyDerivativeGeometry(Object o) -> RigidBodyDerivativeGeometry"""
1079  return _IMP_core._object_cast_to_RigidBodyDerivativeGeometry(*args)
1080 _object_types.append("RigidBodyDerivativesGeometry")
1081 
1082 
1083 def _object_cast_to_RigidBodyDerivativesGeometry(*args):
1084  """_object_cast_to_RigidBodyDerivativesGeometry(Object o) -> RigidBodyDerivativesGeometry"""
1085  return _IMP_core._object_cast_to_RigidBodyDerivativesGeometry(*args)
1086 _object_types.append("RigidBodyHierarchyGeometry")
1087 
1088 
1089 def _object_cast_to_RigidBodyHierarchyGeometry(*args):
1090  """_object_cast_to_RigidBodyHierarchyGeometry(Object o) -> RigidBodyHierarchyGeometry"""
1091  return _IMP_core._object_cast_to_RigidBodyHierarchyGeometry(*args)
1092 _object_types.append("RigidBodyFrameGeometry")
1093 
1094 
1095 def _object_cast_to_RigidBodyFrameGeometry(*args):
1096  """_object_cast_to_RigidBodyFrameGeometry(Object o) -> RigidBodyFrameGeometry"""
1097  return _IMP_core._object_cast_to_RigidBodyFrameGeometry(*args)
1098 _object_types.append("RigidBodyFramesGeometry")
1099 
1100 
1101 def _object_cast_to_RigidBodyFramesGeometry(*args):
1102  """_object_cast_to_RigidBodyFramesGeometry(Object o) -> RigidBodyFramesGeometry"""
1103  return _IMP_core._object_cast_to_RigidBodyFramesGeometry(*args)
1104 _object_types.append("RigidBodyTorque")
1105 
1106 
1107 def _object_cast_to_RigidBodyTorque(*args):
1108  """_object_cast_to_RigidBodyTorque(Object o) -> RigidBodyTorque"""
1109  return _IMP_core._object_cast_to_RigidBodyTorque(*args)
1110 _object_types.append("EdgePairGeometry")
1111 
1112 
1113 def _object_cast_to_EdgePairGeometry(*args):
1114  """_object_cast_to_EdgePairGeometry(Object o) -> EdgePairGeometry"""
1115  return _IMP_core._object_cast_to_EdgePairGeometry(*args)
1116 _object_types.append("EdgePairsGeometry")
1117 
1118 
1119 def _object_cast_to_EdgePairsGeometry(*args):
1120  """_object_cast_to_EdgePairsGeometry(Object o) -> EdgePairsGeometry"""
1121  return _IMP_core._object_cast_to_EdgePairsGeometry(*args)
1122 _object_types.append("AttributeSingletonPredicate")
1123 
1124 
1125 def _object_cast_to_AttributeSingletonPredicate(*args):
1126  """_object_cast_to_AttributeSingletonPredicate(Object o) -> AttributeSingletonPredicate"""
1127  return _IMP_core._object_cast_to_AttributeSingletonPredicate(*args)
1128 _object_types.append("InBoundingBox3DSingletonPredicate")
1129 
1130 
1131 def _object_cast_to_InBoundingBox3DSingletonPredicate(*args):
1132  """_object_cast_to_InBoundingBox3DSingletonPredicate(Object o) -> InBoundingBox3DSingletonPredicate"""
1133  return _IMP_core._object_cast_to_InBoundingBox3DSingletonPredicate(*args)
1134 _object_types.append("IsCollisionPairPredicate")
1135 
1136 
1137 def _object_cast_to_IsCollisionPairPredicate(*args):
1138  """_object_cast_to_IsCollisionPairPredicate(Object o) -> IsCollisionPairPredicate"""
1139  return _IMP_core._object_cast_to_IsCollisionPairPredicate(*args)
1140 class ClosePairsFinder(IMP.kernel._ParticleInputs,IMP.base.Object):
1141  """Proxy of C++ IMP::core::ClosePairsFinder class"""
1142  __swig_setmethods__ = {}
1143  for _s in [IMP.kernel._ParticleInputs,IMP.base.Object]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
1144  __setattr__ = lambda self, name, value: _swig_setattr(self, ClosePairsFinder, name, value)
1145  __swig_getmethods__ = {}
1146  for _s in [IMP.kernel._ParticleInputs,IMP.base.Object]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
1147  __getattr__ = lambda self, name: _swig_getattr(self, ClosePairsFinder, name)
1148  def __init__(self, *args, **kwargs): raise AttributeError("No constructor defined - class is abstract")
1149  __swig_destroy__ = _IMP_core.delete_ClosePairsFinder
1150  __del__ = lambda self : None;
1151  def get_close_pairs(self, *args):
1152  """
1153  get_close_pairs(ClosePairsFinder self, IMP::kernel::ParticlesTemp const & pc) -> IMP::kernel::ParticlePairsTemp
1154  get_close_pairs(ClosePairsFinder self, IMP::kernel::ParticlesTemp const & pca, IMP::kernel::ParticlesTemp const & pcb) -> IMP::kernel::ParticlePairsTemp
1155  get_close_pairs(ClosePairsFinder self, Model m, IMP::kernel::ParticleIndexes const & pc) -> IMP::kernel::ParticleIndexPairs
1156  get_close_pairs(ClosePairsFinder self, Model m, IMP::kernel::ParticleIndexes const & pca, IMP::kernel::ParticleIndexes const & pcb) -> IMP::kernel::ParticleIndexPairs
1157  get_close_pairs(ClosePairsFinder self, IMP::algebra::BoundingBox3Ds const & bbs) -> IMP::IntPairs
1158  get_close_pairs(ClosePairsFinder self, IMP::algebra::BoundingBox3Ds const & bas, IMP::algebra::BoundingBox3Ds const & bbs) -> IMP::IntPairs
1159  """
1160  return _IMP_core.ClosePairsFinder_get_close_pairs(self, *args)
1161 
1162  def set_distance(self, *args):
1163  """set_distance(ClosePairsFinder self, double d)"""
1164  return _IMP_core.ClosePairsFinder_set_distance(self, *args)
1165 
1166  def get_distance(self):
1167  """get_distance(ClosePairsFinder self) -> double"""
1168  return _IMP_core.ClosePairsFinder_get_distance(self)
1169 
1170  def remove_pair_filter(self, *args):
1171  """remove_pair_filter(ClosePairsFinder self, PairPredicate d)"""
1172  return _IMP_core.ClosePairsFinder_remove_pair_filter(self, *args)
1173 
1174  def remove_pair_filters(self, *args):
1175  """remove_pair_filters(ClosePairsFinder self, IMP::kernel::PairPredicates const & d)"""
1176  return _IMP_core.ClosePairsFinder_remove_pair_filters(self, *args)
1177 
1178  def set_pair_filters(self, *args):
1179  """set_pair_filters(ClosePairsFinder self, IMP::kernel::PairPredicates const & ps)"""
1180  return _IMP_core.ClosePairsFinder_set_pair_filters(self, *args)
1181 
1182  def set_pair_filters_order(self, *args):
1183  """set_pair_filters_order(ClosePairsFinder self, IMP::kernel::PairPredicates const & objs)"""
1184  return _IMP_core.ClosePairsFinder_set_pair_filters_order(self, *args)
1185 
1186  def add_pair_filter(self, *args):
1187  """add_pair_filter(ClosePairsFinder self, PairPredicate obj) -> unsigned int"""
1188  return _IMP_core.ClosePairsFinder_add_pair_filter(self, *args)
1189 
1190  def add_pair_filters(self, *args):
1191  """add_pair_filters(ClosePairsFinder self, IMP::kernel::PairPredicates const & objs)"""
1192  return _IMP_core.ClosePairsFinder_add_pair_filters(self, *args)
1193 
1194  def clear_pair_filters(self):
1195  """clear_pair_filters(ClosePairsFinder self)"""
1196  return _IMP_core.ClosePairsFinder_clear_pair_filters(self)
1197 
1198  def get_number_of_pair_filters(self):
1199  """get_number_of_pair_filters(ClosePairsFinder self) -> unsigned int"""
1200  return _IMP_core.ClosePairsFinder_get_number_of_pair_filters(self)
1201 
1202  def get_has_pair_filters(self):
1203  """get_has_pair_filters(ClosePairsFinder self) -> bool"""
1204  return _IMP_core.ClosePairsFinder_get_has_pair_filters(self)
1205 
1206  def get_pair_filter(self, *args):
1207  """get_pair_filter(ClosePairsFinder self, unsigned int i) -> PairPredicate"""
1208  return _IMP_core.ClosePairsFinder_get_pair_filter(self, *args)
1209 
1210  def get_pair_filters(self):
1211  """get_pair_filters(ClosePairsFinder self) -> IMP::kernel::PairPredicates"""
1212  return _IMP_core.ClosePairsFinder_get_pair_filters(self)
1213 
1214  def reserve_pair_filters(self, *args):
1215  """reserve_pair_filters(ClosePairsFinder self, unsigned int sz)"""
1216  return _IMP_core.ClosePairsFinder_reserve_pair_filters(self, *args)
1217 
1218  def __str__(self):
1219  """__str__(ClosePairsFinder self) -> std::string"""
1220  return _IMP_core.ClosePairsFinder___str__(self)
1221 
1222  def __repr__(self):
1223  """__repr__(ClosePairsFinder self) -> std::string"""
1224  return _IMP_core.ClosePairsFinder___repr__(self)
1225 
1226  def get_from(o):
1227  return _object_cast_to_ClosePairsFinder(o)
1228  get_from = staticmethod(get_from)
1229 
1230 ClosePairsFinder_swigregister = _IMP_core.ClosePairsFinder_swigregister
1231 ClosePairsFinder_swigregister(ClosePairsFinder)
1232 
1233 class MonteCarloMoverResult(IMP.base._Value):
1234  """Proxy of C++ IMP::core::MonteCarloMoverResult class"""
1235  __swig_setmethods__ = {}
1236  for _s in [IMP.base._Value]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
1237  __setattr__ = lambda self, name, value: _swig_setattr(self, MonteCarloMoverResult, name, value)
1238  __swig_getmethods__ = {}
1239  for _s in [IMP.base._Value]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
1240  __getattr__ = lambda self, name: _swig_getattr(self, MonteCarloMoverResult, name)
1241  def __init__(self, *args):
1242  """
1243  __init__(IMP::core::MonteCarloMoverResult self, IMP::kernel::ParticleIndexes i0=IMP::kernel::ParticleIndexes(), double i1=double()) -> MonteCarloMoverResult
1244  __init__(IMP::core::MonteCarloMoverResult self, IMP::kernel::ParticleIndexes i0=IMP::kernel::ParticleIndexes()) -> MonteCarloMoverResult
1245  __init__(IMP::core::MonteCarloMoverResult self) -> MonteCarloMoverResult
1246  """
1247  this = _IMP_core.new_MonteCarloMoverResult(*args)
1248  try: self.this.append(this)
1249  except: self.this = this
1250  def __hash__(self):
1251  """__hash__(MonteCarloMoverResult self) -> std::size_t"""
1252  return _IMP_core.MonteCarloMoverResult___hash__(self)
1253 
1254  def show(self, *args):
1255  """
1256  show(MonteCarloMoverResult self, _ostream out=std::cout)
1257  show(MonteCarloMoverResult self)
1258  """
1259  return _IMP_core.MonteCarloMoverResult_show(self, *args)
1260 
1261  def __eq__(self, *args):
1262  """__eq__(MonteCarloMoverResult self, MonteCarloMoverResult o) -> bool"""
1263  return _IMP_core.MonteCarloMoverResult___eq__(self, *args)
1264 
1265  def __ne__(self, *args):
1266  """__ne__(MonteCarloMoverResult self, MonteCarloMoverResult o) -> bool"""
1267  return _IMP_core.MonteCarloMoverResult___ne__(self, *args)
1268 
1269  def __lt__(self, *args):
1270  """__lt__(MonteCarloMoverResult self, MonteCarloMoverResult o) -> bool"""
1271  return _IMP_core.MonteCarloMoverResult___lt__(self, *args)
1272 
1273  def __gt__(self, *args):
1274  """__gt__(MonteCarloMoverResult self, MonteCarloMoverResult o) -> bool"""
1275  return _IMP_core.MonteCarloMoverResult___gt__(self, *args)
1276 
1277  def __ge__(self, *args):
1278  """__ge__(MonteCarloMoverResult self, MonteCarloMoverResult o) -> bool"""
1279  return _IMP_core.MonteCarloMoverResult___ge__(self, *args)
1280 
1281  def __le__(self, *args):
1282  """__le__(MonteCarloMoverResult self, MonteCarloMoverResult o) -> bool"""
1283  return _IMP_core.MonteCarloMoverResult___le__(self, *args)
1284 
1285  def get_moved_particles(self):
1286  """get_moved_particles(MonteCarloMoverResult self) -> IMP::kernel::ParticleIndexes const &"""
1287  return _IMP_core.MonteCarloMoverResult_get_moved_particles(self)
1288 
1289  def set_moved_particles(self, *args):
1290  """set_moved_particles(MonteCarloMoverResult self, IMP::kernel::ParticleIndexes const & v)"""
1291  return _IMP_core.MonteCarloMoverResult_set_moved_particles(self, *args)
1292 
1293  def get_proposal_ratio(self):
1294  """get_proposal_ratio(MonteCarloMoverResult self) -> double const &"""
1295  return _IMP_core.MonteCarloMoverResult_get_proposal_ratio(self)
1296 
1297  def set_proposal_ratio(self, *args):
1298  """set_proposal_ratio(MonteCarloMoverResult self, double const & v)"""
1299  return _IMP_core.MonteCarloMoverResult_set_proposal_ratio(self, *args)
1300 
1301  def __str__(self):
1302  """__str__(MonteCarloMoverResult self) -> std::string"""
1303  return _IMP_core.MonteCarloMoverResult___str__(self)
1304 
1305  def __repr__(self):
1306  """__repr__(MonteCarloMoverResult self) -> std::string"""
1307  return _IMP_core.MonteCarloMoverResult___repr__(self)
1308 
1309  __swig_destroy__ = _IMP_core.delete_MonteCarloMoverResult
1310  __del__ = lambda self : None;
1311 MonteCarloMoverResult_swigregister = _IMP_core.MonteCarloMoverResult_swigregister
1312 MonteCarloMoverResult_swigregister(MonteCarloMoverResult)
1313 
1314 class MonteCarloMover(IMP.kernel.ModelObject):
1315  """Proxy of C++ IMP::core::MonteCarloMover class"""
1316  __swig_setmethods__ = {}
1317  for _s in [IMP.kernel.ModelObject]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
1318  __setattr__ = lambda self, name, value: _swig_setattr(self, MonteCarloMover, name, value)
1319  __swig_getmethods__ = {}
1320  for _s in [IMP.kernel.ModelObject]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
1321  __getattr__ = lambda self, name: _swig_getattr(self, MonteCarloMover, name)
1322  def __init__(self, *args):
1323  """__init__(IMP::core::MonteCarloMover self, Model m, std::string name) -> MonteCarloMover"""
1324  if self.__class__ == MonteCarloMover:
1325  _self = None
1326  else:
1327  _self = self
1328  this = _IMP_core.new_MonteCarloMover(_self, *args)
1329  try: self.this.append(this)
1330  except: self.this = this
1331  if self.__class__ != MonteCarloMover:
1332  import IMP.base
1333  IMP.base._director_objects.register(self)
1334 
1335 
1336 
1337  def propose(self):
1338  """propose(MonteCarloMover self) -> MonteCarloMoverResult"""
1339  return _IMP_core.MonteCarloMover_propose(self)
1340 
1341  def reject(self):
1342  """reject(MonteCarloMover self)"""
1343  return _IMP_core.MonteCarloMover_reject(self)
1344 
1345  def accept(self):
1346  """accept(MonteCarloMover self)"""
1347  return _IMP_core.MonteCarloMover_accept(self)
1348 
1349  def get_number_of_proposed(self):
1350  """get_number_of_proposed(MonteCarloMover self) -> unsigned int"""
1351  return _IMP_core.MonteCarloMover_get_number_of_proposed(self)
1352 
1353  def get_number_of_accepted(self):
1354  """get_number_of_accepted(MonteCarloMover self) -> unsigned int"""
1355  return _IMP_core.MonteCarloMover_get_number_of_accepted(self)
1356 
1357  def reset_statistics(self):
1358  """reset_statistics(MonteCarloMover self)"""
1359  return _IMP_core.MonteCarloMover_reset_statistics(self)
1360 
1361  def do_propose(self):
1362  """do_propose(MonteCarloMover self) -> MonteCarloMoverResult"""
1363  return _IMP_core.MonteCarloMover_do_propose(self)
1364 
1365  def do_reject(self):
1366  """do_reject(MonteCarloMover self)"""
1367  return _IMP_core.MonteCarloMover_do_reject(self)
1368 
1369  def do_accept(self):
1370  """do_accept(MonteCarloMover self)"""
1371  return _IMP_core.MonteCarloMover_do_accept(self)
1372 
1373  def do_get_outputs(self):
1374  """do_get_outputs(MonteCarloMover self) -> IMP::kernel::ModelObjectsTemp"""
1375  return _IMP_core.MonteCarloMover_do_get_outputs(self)
1376 
1377  def __str__(self):
1378  """__str__(MonteCarloMover self) -> std::string"""
1379  return _IMP_core.MonteCarloMover___str__(self)
1380 
1381  def __repr__(self):
1382  """__repr__(MonteCarloMover self) -> std::string"""
1383  return _IMP_core.MonteCarloMover___repr__(self)
1384 
1385  def get_from(o):
1386  return _object_cast_to_MonteCarloMover(o)
1387  get_from = staticmethod(get_from)
1388 
1389  def get_type_name(self):
1390  return self.__class__.__name__
1391  def do_show(self, out):
1392  pass
1393  def get_version_info(self):
1394  if"IMP::core" == "IMP":
1395  return VersionInfo("python", "0")
1396  else:
1397  return IMP.VersionInfo("python", "0")
1398  def get_from(o):
1399  return _object_cast_to_MonteCarloMover(o)
1400  get_from = staticmethod(get_from)
1401 
1402  __swig_destroy__ = _IMP_core.delete_MonteCarloMover
1403  __del__ = lambda self : None;
1404  def __disown__(self):
1405  self.this.disown()
1406  _IMP_core.disown_MonteCarloMover(self)
1407  return weakref_proxy(self)
1408  def do_destroy(self):
1409  """do_destroy(MonteCarloMover self)"""
1410  return _IMP_core.MonteCarloMover_do_destroy(self)
1411 
1412  def handle_set_has_required_score_states(self, *args):
1413  """handle_set_has_required_score_states(MonteCarloMover self, bool arg0)"""
1414  return _IMP_core.MonteCarloMover_handle_set_has_required_score_states(self, *args)
1415 
1416  def do_get_inputs(self):
1417  """do_get_inputs(MonteCarloMover self) -> IMP::kernel::ModelObjectsTemp"""
1418  return _IMP_core.MonteCarloMover_do_get_inputs(self)
1419 
1420  def do_get_interactions(self):
1421  """do_get_interactions(MonteCarloMover self) -> IMP::kernel::ModelObjectsTemps"""
1422  return _IMP_core.MonteCarloMover_do_get_interactions(self)
1423 
1424 MonteCarloMover_swigregister = _IMP_core.MonteCarloMover_swigregister
1425 MonteCarloMover_swigregister(MonteCarloMover)
1426 
1427 class XYZ(IMP.kernel.Decorator):
1428  """Proxy of C++ IMP::core::XYZ class"""
1429  __swig_setmethods__ = {}
1430  for _s in [IMP.kernel.Decorator]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
1431  __setattr__ = lambda self, name, value: _swig_setattr(self, XYZ, name, value)
1432  __swig_getmethods__ = {}
1433  for _s in [IMP.kernel.Decorator]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
1434  __getattr__ = lambda self, name: _swig_getattr(self, XYZ, name)
1435  def get_coordinate_key(*args):
1436  """get_coordinate_key(unsigned int i) -> FloatKey"""
1437  return _IMP_core.XYZ_get_coordinate_key(*args)
1438 
1439  if _newclass:get_coordinate_key = staticmethod(get_coordinate_key)
1440  __swig_getmethods__["get_coordinate_key"] = lambda x: get_coordinate_key
1441  def __init__(self, *args):
1442  """
1443  __init__(IMP::core::XYZ self) -> XYZ
1444  __init__(IMP::core::XYZ self, Model m, ::IMP::kernel::ParticleIndex id) -> XYZ
1445  __init__(IMP::core::XYZ self, _ParticleAdaptor d) -> XYZ
1446  """
1447  this = _IMP_core.new_XYZ(*args)
1448  try: self.this.append(this)
1449  except: self.this = this
1450  def show(self, *args):
1451  """
1452  show(XYZ self, _ostream out=std::cout)
1453  show(XYZ self)
1454  """
1455  return _IMP_core.XYZ_show(self, *args)
1456 
1457  def setup_particle(*args):
1458  """
1459  setup_particle(Model m, IMP::kernel::ParticleIndex pi) -> XYZ
1460  setup_particle(_ParticleAdaptor decorator) -> XYZ
1461  setup_particle(Model m, IMP::kernel::ParticleIndex pi, Vector3D v) -> XYZ
1462  setup_particle(_ParticleAdaptor decorator, Vector3D v) -> XYZ
1463  """
1464  return _IMP_core.XYZ_setup_particle(*args)
1465 
1466  if _newclass:setup_particle = staticmethod(setup_particle)
1467  __swig_getmethods__["setup_particle"] = lambda x: setup_particle
1468  def get_x(self):
1469  """get_x(XYZ self) -> IMP::Float"""
1470  return _IMP_core.XYZ_get_x(self)
1471 
1472  def set_x(self, *args):
1473  """set_x(XYZ self, IMP::Float t)"""
1474  return _IMP_core.XYZ_set_x(self, *args)
1475 
1476  def get_y(self):
1477  """get_y(XYZ self) -> IMP::Float"""
1478  return _IMP_core.XYZ_get_y(self)
1479 
1480  def set_y(self, *args):
1481  """set_y(XYZ self, IMP::Float t)"""
1482  return _IMP_core.XYZ_set_y(self, *args)
1483 
1484  def get_z(self):
1485  """get_z(XYZ self) -> IMP::Float"""
1486  return _IMP_core.XYZ_get_z(self)
1487 
1488  def set_z(self, *args):
1489  """set_z(XYZ self, IMP::Float t)"""
1490  return _IMP_core.XYZ_set_z(self, *args)
1491 
1492  def set_coordinate(self, *args):
1493  """set_coordinate(XYZ self, unsigned int i, IMP::Float v)"""
1494  return _IMP_core.XYZ_set_coordinate(self, *args)
1495 
1496  def set_coordinates(self, *args):
1497  """set_coordinates(XYZ self, Vector3D v)"""
1498  return _IMP_core.XYZ_set_coordinates(self, *args)
1499 
1500  def get_coordinate(self, *args):
1501  """get_coordinate(XYZ self, int i) -> IMP::Float"""
1502  return _IMP_core.XYZ_get_coordinate(self, *args)
1503 
1504  def add_to_derivatives(self, *args):
1505  """add_to_derivatives(XYZ self, Vector3D v, DerivativeAccumulator d)"""
1506  return _IMP_core.XYZ_add_to_derivatives(self, *args)
1507 
1508  def get_coordinates_are_optimized(self):
1509  """get_coordinates_are_optimized(XYZ self) -> bool"""
1510  return _IMP_core.XYZ_get_coordinates_are_optimized(self)
1511 
1512  def set_coordinates_are_optimized(self, *args):
1513  """set_coordinates_are_optimized(XYZ self, bool tf)"""
1514  return _IMP_core.XYZ_set_coordinates_are_optimized(self, *args)
1515 
1516  def get_vector_to(self, *args):
1517  """get_vector_to(XYZ self, XYZ b) -> Vector3D"""
1518  return _IMP_core.XYZ_get_vector_to(self, *args)
1519 
1520  def get_coordinates(self):
1521  """get_coordinates(XYZ self) -> Vector3D"""
1522  return _IMP_core.XYZ_get_coordinates(self)
1523 
1524  def get_derivatives(self):
1525  """get_derivatives(XYZ self) -> Vector3D"""
1526  return _IMP_core.XYZ_get_derivatives(self)
1527 
1528  def get_is_setup(*args):
1529  """
1530  get_is_setup(_ParticleAdaptor p) -> bool
1531  get_is_setup(Model m, IMP::kernel::ParticleIndex pi) -> bool
1532  """
1533  return _IMP_core.XYZ_get_is_setup(*args)
1534 
1535  if _newclass:get_is_setup = staticmethod(get_is_setup)
1536  __swig_getmethods__["get_is_setup"] = lambda x: get_is_setup
1537  def get_xyz_keys():
1538  """get_xyz_keys() -> IMP::kernel::FloatKeys const &"""
1539  return _IMP_core.XYZ_get_xyz_keys()
1540 
1541  if _newclass:get_xyz_keys = staticmethod(get_xyz_keys)
1542  __swig_getmethods__["get_xyz_keys"] = lambda x: get_xyz_keys
1543  def add_attribute(self, *args):
1544  """
1545  add_attribute(XYZ self, FloatKey k, IMP::Float v, bool opt)
1546  add_attribute(XYZ self, FloatKey a0, IMP::Float a1)
1547  add_attribute(XYZ self, IntKey a0, IMP::Int a1)
1548  add_attribute(XYZ self, StringKey a0, IMP::String a1)
1549  add_attribute(XYZ self, ParticleIndexKey a0, Particle a1)
1550  add_attribute(XYZ self, ObjectKey a0, Object a1)
1551  """
1552  return _IMP_core.XYZ_add_attribute(self, *args)
1553 
1554  def get_value(self, *args):
1555  """
1556  get_value(XYZ self, FloatKey a0) -> IMP::Float
1557  get_value(XYZ self, IntKey a0) -> IMP::Int
1558  get_value(XYZ self, StringKey a0) -> IMP::String
1559  get_value(XYZ self, ParticleIndexKey a0) -> Particle
1560  get_value(XYZ self, ObjectKey a0) -> Object
1561  """
1562  return _IMP_core.XYZ_get_value(self, *args)
1563 
1564  def set_value(self, *args):
1565  """
1566  set_value(XYZ self, FloatKey a0, IMP::Float a1)
1567  set_value(XYZ self, IntKey a0, IMP::Int a1)
1568  set_value(XYZ self, StringKey a0, IMP::String a1)
1569  set_value(XYZ self, ParticleIndexKey a0, Particle a1)
1570  set_value(XYZ self, ObjectKey a0, Object a1)
1571  """
1572  return _IMP_core.XYZ_set_value(self, *args)
1573 
1574  def remove_attribute(self, *args):
1575  """
1576  remove_attribute(XYZ self, FloatKey a0)
1577  remove_attribute(XYZ self, IntKey a0)
1578  remove_attribute(XYZ self, StringKey a0)
1579  remove_attribute(XYZ self, ParticleIndexKey a0)
1580  remove_attribute(XYZ self, ObjectKey a0)
1581  """
1582  return _IMP_core.XYZ_remove_attribute(self, *args)
1583 
1584  def has_attribute(self, *args):
1585  """
1586  has_attribute(XYZ self, FloatKey a0) -> bool
1587  has_attribute(XYZ self, IntKey a0) -> bool
1588  has_attribute(XYZ self, StringKey a0) -> bool
1589  has_attribute(XYZ self, ParticleIndexKey a0) -> bool
1590  has_attribute(XYZ self, ObjectKey a0) -> bool
1591  """
1592  return _IMP_core.XYZ_has_attribute(self, *args)
1593 
1594  def get_derivative(self, *args):
1595  """
1596  get_derivative(XYZ self, int i) -> IMP::Float
1597  get_derivative(XYZ self, FloatKey a0) -> double
1598  """
1599  return _IMP_core.XYZ_get_derivative(self, *args)
1600 
1601  def get_name(self):
1602  """get_name(XYZ self) -> std::string"""
1603  return _IMP_core.XYZ_get_name(self)
1604 
1605  def clear_caches(self):
1606  """clear_caches(XYZ self)"""
1607  return _IMP_core.XYZ_clear_caches(self)
1608 
1609  def set_name(self, *args):
1610  """set_name(XYZ self, std::string a0)"""
1611  return _IMP_core.XYZ_set_name(self, *args)
1612 
1613  def set_check_level(self, *args):
1614  """set_check_level(XYZ self, IMP::base::CheckLevel a0)"""
1615  return _IMP_core.XYZ_set_check_level(self, *args)
1616 
1617  def add_to_derivative(self, *args):
1618  """
1619  add_to_derivative(XYZ self, int i, IMP::Float v, DerivativeAccumulator d)
1620  add_to_derivative(XYZ self, FloatKey a0, double a1, DerivativeAccumulator a2)
1621  """
1622  return _IMP_core.XYZ_add_to_derivative(self, *args)
1623 
1624  def set_is_optimized(self, *args):
1625  """set_is_optimized(XYZ self, FloatKey a0, bool a1)"""
1626  return _IMP_core.XYZ_set_is_optimized(self, *args)
1627 
1628  def get_is_optimized(self, *args):
1629  """get_is_optimized(XYZ self, FloatKey a0) -> bool"""
1630  return _IMP_core.XYZ_get_is_optimized(self, *args)
1631 
1632  def get_check_level(self):
1633  """get_check_level(XYZ self) -> IMP::base::CheckLevel"""
1634  return _IMP_core.XYZ_get_check_level(self)
1635 
1636  def __eq__(self, *args):
1637  """
1638  __eq__(XYZ self, XYZ o) -> bool
1639  __eq__(XYZ self, Particle d) -> bool
1640  """
1641  return _IMP_core.XYZ___eq__(self, *args)
1642 
1643  def __ne__(self, *args):
1644  """
1645  __ne__(XYZ self, XYZ o) -> bool
1646  __ne__(XYZ self, Particle d) -> bool
1647  """
1648  return _IMP_core.XYZ___ne__(self, *args)
1649 
1650  def __le__(self, *args):
1651  """
1652  __le__(XYZ self, XYZ o) -> bool
1653  __le__(XYZ self, Particle d) -> bool
1654  """
1655  return _IMP_core.XYZ___le__(self, *args)
1656 
1657  def __lt__(self, *args):
1658  """
1659  __lt__(XYZ self, XYZ o) -> bool
1660  __lt__(XYZ self, Particle d) -> bool
1661  """
1662  return _IMP_core.XYZ___lt__(self, *args)
1663 
1664  def __ge__(self, *args):
1665  """
1666  __ge__(XYZ self, XYZ o) -> bool
1667  __ge__(XYZ self, Particle d) -> bool
1668  """
1669  return _IMP_core.XYZ___ge__(self, *args)
1670 
1671  def __gt__(self, *args):
1672  """
1673  __gt__(XYZ self, XYZ o) -> bool
1674  __gt__(XYZ self, Particle d) -> bool
1675  """
1676  return _IMP_core.XYZ___gt__(self, *args)
1677 
1678  def __str__(self):
1679  """__str__(XYZ self) -> std::string"""
1680  return _IMP_core.XYZ___str__(self)
1681 
1682  def __repr__(self):
1683  """__repr__(XYZ self) -> std::string"""
1684  return _IMP_core.XYZ___repr__(self)
1685 
1686  __swig_destroy__ = _IMP_core.delete_XYZ
1687  __del__ = lambda self : None;
1688 XYZ_swigregister = _IMP_core.XYZ_swigregister
1689 XYZ_swigregister(XYZ)
1690 
1691 def XYZ_get_coordinate_key(*args):
1692  """XYZ_get_coordinate_key(unsigned int i) -> FloatKey"""
1693  return _IMP_core.XYZ_get_coordinate_key(*args)
1694 
1695 def XYZ_setup_particle(*args):
1696  """
1697  setup_particle(Model m, IMP::kernel::ParticleIndex pi) -> XYZ
1698  setup_particle(_ParticleAdaptor decorator) -> XYZ
1699  setup_particle(Model m, IMP::kernel::ParticleIndex pi, Vector3D v) -> XYZ
1700  XYZ_setup_particle(_ParticleAdaptor decorator, Vector3D v) -> XYZ
1701  """
1702  return _IMP_core.XYZ_setup_particle(*args)
1703 
1704 def XYZ_get_is_setup(*args):
1705  """
1706  get_is_setup(_ParticleAdaptor p) -> bool
1707  XYZ_get_is_setup(Model m, IMP::kernel::ParticleIndex pi) -> bool
1708  """
1709  return _IMP_core.XYZ_get_is_setup(*args)
1710 
1711 def XYZ_get_xyz_keys():
1712  """XYZ_get_xyz_keys() -> IMP::kernel::FloatKeys const &"""
1713  return _IMP_core.XYZ_get_xyz_keys()
1714 
1715 
1716 def set_vector_geometry(*args):
1717  """set_vector_geometry(XYZ d, Vector3D v)"""
1718  return _IMP_core.set_vector_geometry(*args)
1719 
1720 def get_vector_geometry(*args):
1721  """get_vector_geometry(XYZ d) -> Vector3D"""
1722  return _IMP_core.get_vector_geometry(*args)
1723 
1724 def get_dihedral(*args):
1725  """get_dihedral(XYZ a, XYZ b, XYZ c, XYZ d) -> double"""
1726  return _IMP_core.get_dihedral(*args)
1727 class XYZR(XYZ):
1728  """Proxy of C++ IMP::core::XYZR class"""
1729  __swig_setmethods__ = {}
1730  for _s in [XYZ]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
1731  __setattr__ = lambda self, name, value: _swig_setattr(self, XYZR, name, value)
1732  __swig_getmethods__ = {}
1733  for _s in [XYZ]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
1734  __getattr__ = lambda self, name: _swig_getattr(self, XYZR, name)
1735  def __init__(self, *args):
1736  """
1737  __init__(IMP::core::XYZR self) -> XYZR
1738  __init__(IMP::core::XYZR self, Model m, ::IMP::kernel::ParticleIndex id) -> XYZR
1739  __init__(IMP::core::XYZR self, _ParticleAdaptor d) -> XYZR
1740  """
1741  this = _IMP_core.new_XYZR(*args)
1742  try: self.this.append(this)
1743  except: self.this = this
1744  def show(self, *args):
1745  """
1746  show(XYZR self, _ostream out=std::cout)
1747  show(XYZR self)
1748  """
1749  return _IMP_core.XYZR_show(self, *args)
1750 
1751  def setup_particle(*args):
1752  """
1753  setup_particle(Model m, IMP::kernel::ParticleIndex pi) -> XYZR
1754  setup_particle(_ParticleAdaptor decorator) -> XYZR
1755  setup_particle(Model m, IMP::kernel::ParticleIndex pi, IMP::Float radius) -> XYZR
1756  setup_particle(_ParticleAdaptor decorator, IMP::Float radius) -> XYZR
1757  setup_particle(Model m, IMP::kernel::ParticleIndex pi, Sphere3D ball) -> XYZR
1758  setup_particle(_ParticleAdaptor decorator, Sphere3D ball) -> XYZR
1759  """
1760  return _IMP_core.XYZR_setup_particle(*args)
1761 
1762  if _newclass:setup_particle = staticmethod(setup_particle)
1763  __swig_getmethods__["setup_particle"] = lambda x: setup_particle
1764  def get_is_setup(*args):
1765  """
1766  get_is_setup(_ParticleAdaptor p) -> bool
1767  get_is_setup(Model m, IMP::kernel::ParticleIndex pi) -> bool
1768  """
1769  return _IMP_core.XYZR_get_is_setup(*args)
1770 
1771  if _newclass:get_is_setup = staticmethod(get_is_setup)
1772  __swig_getmethods__["get_is_setup"] = lambda x: get_is_setup
1773  def get_radius(self):
1774  """get_radius(XYZR self) -> double"""
1775  return _IMP_core.XYZR_get_radius(self)
1776 
1777  def set_radius(self, *args):
1778  """set_radius(XYZR self, double r)"""
1779  return _IMP_core.XYZR_set_radius(self, *args)
1780 
1781  def get_sphere(self):
1782  """get_sphere(XYZR self) -> Sphere3D"""
1783  return _IMP_core.XYZR_get_sphere(self)
1784 
1785  def set_sphere(self, *args):
1786  """set_sphere(XYZR self, Sphere3D s)"""
1787  return _IMP_core.XYZR_set_sphere(self, *args)
1788 
1789  def get_radius_key():
1790  """get_radius_key() -> FloatKey"""
1791  return _IMP_core.XYZR_get_radius_key()
1792 
1793  if _newclass:get_radius_key = staticmethod(get_radius_key)
1794  __swig_getmethods__["get_radius_key"] = lambda x: get_radius_key
1795  def add_to_radius_derivative(self, *args):
1796  """add_to_radius_derivative(XYZR self, double v, DerivativeAccumulator d)"""
1797  return _IMP_core.XYZR_add_to_radius_derivative(self, *args)
1798 
1799  def add_attribute(self, *args):
1800  """
1801  add_attribute(XYZR self, FloatKey k, IMP::Float v, bool opt)
1802  add_attribute(XYZR self, FloatKey a0, IMP::Float a1)
1803  add_attribute(XYZR self, IntKey a0, IMP::Int a1)
1804  add_attribute(XYZR self, StringKey a0, IMP::String a1)
1805  add_attribute(XYZR self, ParticleIndexKey a0, Particle a1)
1806  add_attribute(XYZR self, ObjectKey a0, Object a1)
1807  """
1808  return _IMP_core.XYZR_add_attribute(self, *args)
1809 
1810  def get_value(self, *args):
1811  """
1812  get_value(XYZR self, FloatKey a0) -> IMP::Float
1813  get_value(XYZR self, IntKey a0) -> IMP::Int
1814  get_value(XYZR self, StringKey a0) -> IMP::String
1815  get_value(XYZR self, ParticleIndexKey a0) -> Particle
1816  get_value(XYZR self, ObjectKey a0) -> Object
1817  """
1818  return _IMP_core.XYZR_get_value(self, *args)
1819 
1820  def set_value(self, *args):
1821  """
1822  set_value(XYZR self, FloatKey a0, IMP::Float a1)
1823  set_value(XYZR self, IntKey a0, IMP::Int a1)
1824  set_value(XYZR self, StringKey a0, IMP::String a1)
1825  set_value(XYZR self, ParticleIndexKey a0, Particle a1)
1826  set_value(XYZR self, ObjectKey a0, Object a1)
1827  """
1828  return _IMP_core.XYZR_set_value(self, *args)
1829 
1830  def remove_attribute(self, *args):
1831  """
1832  remove_attribute(XYZR self, FloatKey a0)
1833  remove_attribute(XYZR self, IntKey a0)
1834  remove_attribute(XYZR self, StringKey a0)
1835  remove_attribute(XYZR self, ParticleIndexKey a0)
1836  remove_attribute(XYZR self, ObjectKey a0)
1837  """
1838  return _IMP_core.XYZR_remove_attribute(self, *args)
1839 
1840  def has_attribute(self, *args):
1841  """
1842  has_attribute(XYZR self, FloatKey a0) -> bool
1843  has_attribute(XYZR self, IntKey a0) -> bool
1844  has_attribute(XYZR self, StringKey a0) -> bool
1845  has_attribute(XYZR self, ParticleIndexKey a0) -> bool
1846  has_attribute(XYZR self, ObjectKey a0) -> bool
1847  """
1848  return _IMP_core.XYZR_has_attribute(self, *args)
1849 
1850  def get_derivative(self, *args):
1851  """get_derivative(XYZR self, FloatKey a0) -> double"""
1852  return _IMP_core.XYZR_get_derivative(self, *args)
1853 
1854  def get_name(self):
1855  """get_name(XYZR self) -> std::string"""
1856  return _IMP_core.XYZR_get_name(self)
1857 
1858  def clear_caches(self):
1859  """clear_caches(XYZR self)"""
1860  return _IMP_core.XYZR_clear_caches(self)
1861 
1862  def set_name(self, *args):
1863  """set_name(XYZR self, std::string a0)"""
1864  return _IMP_core.XYZR_set_name(self, *args)
1865 
1866  def set_check_level(self, *args):
1867  """set_check_level(XYZR self, IMP::base::CheckLevel a0)"""
1868  return _IMP_core.XYZR_set_check_level(self, *args)
1869 
1870  def add_to_derivative(self, *args):
1871  """add_to_derivative(XYZR self, FloatKey a0, double a1, DerivativeAccumulator a2)"""
1872  return _IMP_core.XYZR_add_to_derivative(self, *args)
1873 
1874  def set_is_optimized(self, *args):
1875  """set_is_optimized(XYZR self, FloatKey a0, bool a1)"""
1876  return _IMP_core.XYZR_set_is_optimized(self, *args)
1877 
1878  def get_is_optimized(self, *args):
1879  """get_is_optimized(XYZR self, FloatKey a0) -> bool"""
1880  return _IMP_core.XYZR_get_is_optimized(self, *args)
1881 
1882  def get_check_level(self):
1883  """get_check_level(XYZR self) -> IMP::base::CheckLevel"""
1884  return _IMP_core.XYZR_get_check_level(self)
1885 
1886  def __eq__(self, *args):
1887  """
1888  __eq__(XYZR self, XYZR o) -> bool
1889  __eq__(XYZR self, Particle d) -> bool
1890  """
1891  return _IMP_core.XYZR___eq__(self, *args)
1892 
1893  def __ne__(self, *args):
1894  """
1895  __ne__(XYZR self, XYZR o) -> bool
1896  __ne__(XYZR self, Particle d) -> bool
1897  """
1898  return _IMP_core.XYZR___ne__(self, *args)
1899 
1900  def __le__(self, *args):
1901  """
1902  __le__(XYZR self, XYZR o) -> bool
1903  __le__(XYZR self, Particle d) -> bool
1904  """
1905  return _IMP_core.XYZR___le__(self, *args)
1906 
1907  def __lt__(self, *args):
1908  """
1909  __lt__(XYZR self, XYZR o) -> bool
1910  __lt__(XYZR self, Particle d) -> bool
1911  """
1912  return _IMP_core.XYZR___lt__(self, *args)
1913 
1914  def __ge__(self, *args):
1915  """
1916  __ge__(XYZR self, XYZR o) -> bool
1917  __ge__(XYZR self, Particle d) -> bool
1918  """
1919  return _IMP_core.XYZR___ge__(self, *args)
1920 
1921  def __gt__(self, *args):
1922  """
1923  __gt__(XYZR self, XYZR o) -> bool
1924  __gt__(XYZR self, Particle d) -> bool
1925  """
1926  return _IMP_core.XYZR___gt__(self, *args)
1927 
1928  def __str__(self):
1929  """__str__(XYZR self) -> std::string"""
1930  return _IMP_core.XYZR___str__(self)
1931 
1932  def __repr__(self):
1933  """__repr__(XYZR self) -> std::string"""
1934  return _IMP_core.XYZR___repr__(self)
1935 
1936  __swig_destroy__ = _IMP_core.delete_XYZR
1937  __del__ = lambda self : None;
1938 XYZR_swigregister = _IMP_core.XYZR_swigregister
1939 XYZR_swigregister(XYZR)
1940 
1941 def XYZR_setup_particle(*args):
1942  """
1943  setup_particle(Model m, IMP::kernel::ParticleIndex pi) -> XYZR
1944  setup_particle(_ParticleAdaptor decorator) -> XYZR
1945  setup_particle(Model m, IMP::kernel::ParticleIndex pi, IMP::Float radius) -> XYZR
1946  setup_particle(_ParticleAdaptor decorator, IMP::Float radius) -> XYZR
1947  setup_particle(Model m, IMP::kernel::ParticleIndex pi, Sphere3D ball) -> XYZR
1948  XYZR_setup_particle(_ParticleAdaptor decorator, Sphere3D ball) -> XYZR
1949  """
1950  return _IMP_core.XYZR_setup_particle(*args)
1951 
1952 def XYZR_get_is_setup(*args):
1953  """
1954  get_is_setup(_ParticleAdaptor p) -> bool
1955  XYZR_get_is_setup(Model m, IMP::kernel::ParticleIndex pi) -> bool
1956  """
1957  return _IMP_core.XYZR_get_is_setup(*args)
1958 
1959 def XYZR_get_radius_key():
1960  """XYZR_get_radius_key() -> FloatKey"""
1961  return _IMP_core.XYZR_get_radius_key()
1962 
1963 
1964 def get_distance(*args):
1965  """
1966  get_distance(XYZ a, XYZ b) -> double
1967  get_distance(XYZR a, XYZR b) -> double
1968  """
1969  return _IMP_core.get_distance(*args)
1970 
1971 def set_enclosing_sphere(*args):
1972  """
1973  set_enclosing_sphere(XYZR b, IMP::core::XYZs const & v, double slack=0)
1974  set_enclosing_sphere(XYZR b, IMP::core::XYZs const & v)
1975  """
1976  return _IMP_core.set_enclosing_sphere(*args)
1977 
1978 def set_enclosing_radius(*args):
1979  """set_enclosing_radius(XYZR b, IMP::core::XYZs const & v)"""
1980  return _IMP_core.set_enclosing_radius(*args)
1981 
1982 def get_enclosing_sphere(*args):
1983  """get_enclosing_sphere(IMP::core::XYZs const & v) -> Sphere3D"""
1984  return _IMP_core.get_enclosing_sphere(*args)
1985 
1986 def create_xyzr_particles(*args):
1987  """
1988  create_xyzr_particles(Model m, unsigned int num, IMP::Float radius, IMP::Float box_side=10) -> IMP::core::XYZRs
1989  create_xyzr_particles(Model m, unsigned int num, IMP::Float radius) -> IMP::core::XYZRs
1990  """
1991  return _IMP_core.create_xyzr_particles(*args)
1992 class XYZRGeometry(IMP.display.SingletonGeometry):
1993  """Proxy of C++ IMP::core::XYZRGeometry class"""
1994  __swig_setmethods__ = {}
1995  for _s in [IMP.display.SingletonGeometry]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
1996  __setattr__ = lambda self, name, value: _swig_setattr(self, XYZRGeometry, name, value)
1997  __swig_getmethods__ = {}
1998  for _s in [IMP.display.SingletonGeometry]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
1999  __getattr__ = lambda self, name: _swig_getattr(self, XYZRGeometry, name)
2000  def __init__(self, *args):
2001  """
2002  __init__(IMP::core::XYZRGeometry self, Particle p) -> XYZRGeometry
2003  __init__(IMP::core::XYZRGeometry self, XYZR d) -> XYZRGeometry
2004  """
2005  this = _IMP_core.new_XYZRGeometry(*args)
2006  try: self.this.append(this)
2007  except: self.this = this
2008  def get_version_info(self):
2009  """get_version_info(XYZRGeometry self) -> VersionInfo"""
2010  return _IMP_core.XYZRGeometry_get_version_info(self)
2011 
2012  def __str__(self):
2013  """__str__(XYZRGeometry self) -> std::string"""
2014  return _IMP_core.XYZRGeometry___str__(self)
2015 
2016  def __repr__(self):
2017  """__repr__(XYZRGeometry self) -> std::string"""
2018  return _IMP_core.XYZRGeometry___repr__(self)
2019 
2020  def get_from(o):
2021  return _object_cast_to_XYZRGeometry(o)
2022  get_from = staticmethod(get_from)
2023 
2024 XYZRGeometry_swigregister = _IMP_core.XYZRGeometry_swigregister
2025 XYZRGeometry_swigregister(XYZRGeometry)
2026 
2027 class XYZRsGeometry(IMP.display.SingletonsGeometry):
2028  """Proxy of C++ IMP::core::XYZRsGeometry class"""
2029  __swig_setmethods__ = {}
2030  for _s in [IMP.display.SingletonsGeometry]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
2031  __setattr__ = lambda self, name, value: _swig_setattr(self, XYZRsGeometry, name, value)
2032  __swig_getmethods__ = {}
2033  for _s in [IMP.display.SingletonsGeometry]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
2034  __getattr__ = lambda self, name: _swig_getattr(self, XYZRsGeometry, name)
2035  def __init__(self, *args):
2036  """__init__(IMP::core::XYZRsGeometry self, SingletonContainer sc) -> XYZRsGeometry"""
2037  this = _IMP_core.new_XYZRsGeometry(*args)
2038  try: self.this.append(this)
2039  except: self.this = this
2040  def get_version_info(self):
2041  """get_version_info(XYZRsGeometry self) -> VersionInfo"""
2042  return _IMP_core.XYZRsGeometry_get_version_info(self)
2043 
2044  def __str__(self):
2045  """__str__(XYZRsGeometry self) -> std::string"""
2046  return _IMP_core.XYZRsGeometry___str__(self)
2047 
2048  def __repr__(self):
2049  """__repr__(XYZRsGeometry self) -> std::string"""
2050  return _IMP_core.XYZRsGeometry___repr__(self)
2051 
2052  def get_from(o):
2053  return _object_cast_to_XYZRsGeometry(o)
2054  get_from = staticmethod(get_from)
2055 
2056 XYZRsGeometry_swigregister = _IMP_core.XYZRsGeometry_swigregister
2057 XYZRsGeometry_swigregister(XYZRsGeometry)
2058 
2059 class XYZDerivativeGeometry(IMP.display.SingletonGeometry):
2060  """Proxy of C++ IMP::core::XYZDerivativeGeometry class"""
2061  __swig_setmethods__ = {}
2062  for _s in [IMP.display.SingletonGeometry]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
2063  __setattr__ = lambda self, name, value: _swig_setattr(self, XYZDerivativeGeometry, name, value)
2064  __swig_getmethods__ = {}
2065  for _s in [IMP.display.SingletonGeometry]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
2066  __getattr__ = lambda self, name: _swig_getattr(self, XYZDerivativeGeometry, name)
2067  def __init__(self, *args):
2068  """
2069  __init__(IMP::core::XYZDerivativeGeometry self, Particle p) -> XYZDerivativeGeometry
2070  __init__(IMP::core::XYZDerivativeGeometry self, XYZ d) -> XYZDerivativeGeometry
2071  """
2072  this = _IMP_core.new_XYZDerivativeGeometry(*args)
2073  try: self.this.append(this)
2074  except: self.this = this
2075  def get_version_info(self):
2076  """get_version_info(XYZDerivativeGeometry self) -> VersionInfo"""
2077  return _IMP_core.XYZDerivativeGeometry_get_version_info(self)
2078 
2079  def __str__(self):
2080  """__str__(XYZDerivativeGeometry self) -> std::string"""
2081  return _IMP_core.XYZDerivativeGeometry___str__(self)
2082 
2083  def __repr__(self):
2084  """__repr__(XYZDerivativeGeometry self) -> std::string"""
2085  return _IMP_core.XYZDerivativeGeometry___repr__(self)
2086 
2087  def get_from(o):
2088  return _object_cast_to_XYZDerivativeGeometry(o)
2089  get_from = staticmethod(get_from)
2090 
2091 XYZDerivativeGeometry_swigregister = _IMP_core.XYZDerivativeGeometry_swigregister
2092 XYZDerivativeGeometry_swigregister(XYZDerivativeGeometry)
2093 
2094 class XYZDerivativesGeometry(IMP.display.SingletonsGeometry):
2095  """Proxy of C++ IMP::core::XYZDerivativesGeometry class"""
2096  __swig_setmethods__ = {}
2097  for _s in [IMP.display.SingletonsGeometry]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
2098  __setattr__ = lambda self, name, value: _swig_setattr(self, XYZDerivativesGeometry, name, value)
2099  __swig_getmethods__ = {}
2100  for _s in [IMP.display.SingletonsGeometry]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
2101  __getattr__ = lambda self, name: _swig_getattr(self, XYZDerivativesGeometry, name)
2102  def __init__(self, *args):
2103  """__init__(IMP::core::XYZDerivativesGeometry self, SingletonContainer sc) -> XYZDerivativesGeometry"""
2104  this = _IMP_core.new_XYZDerivativesGeometry(*args)
2105  try: self.this.append(this)
2106  except: self.this = this
2107  def get_version_info(self):
2108  """get_version_info(XYZDerivativesGeometry self) -> VersionInfo"""
2109  return _IMP_core.XYZDerivativesGeometry_get_version_info(self)
2110 
2111  def __str__(self):
2112  """__str__(XYZDerivativesGeometry self) -> std::string"""
2113  return _IMP_core.XYZDerivativesGeometry___str__(self)
2114 
2115  def __repr__(self):
2116  """__repr__(XYZDerivativesGeometry self) -> std::string"""
2117  return _IMP_core.XYZDerivativesGeometry___repr__(self)
2118 
2119  def get_from(o):
2120  return _object_cast_to_XYZDerivativesGeometry(o)
2121  get_from = staticmethod(get_from)
2122 
2123 XYZDerivativesGeometry_swigregister = _IMP_core.XYZDerivativesGeometry_swigregister
2124 XYZDerivativesGeometry_swigregister(XYZDerivativesGeometry)
2125 
2126 class EdgePairGeometry(IMP.display.PairGeometry):
2127  """Proxy of C++ IMP::core::EdgePairGeometry class"""
2128  __swig_setmethods__ = {}
2129  for _s in [IMP.display.PairGeometry]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
2130  __setattr__ = lambda self, name, value: _swig_setattr(self, EdgePairGeometry, name, value)
2131  __swig_getmethods__ = {}
2132  for _s in [IMP.display.PairGeometry]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
2133  __getattr__ = lambda self, name: _swig_getattr(self, EdgePairGeometry, name)
2134  def __init__(self, *args):
2135  """__init__(IMP::core::EdgePairGeometry self, IMP::kernel::ParticlePair const & pp) -> EdgePairGeometry"""
2136  this = _IMP_core.new_EdgePairGeometry(*args)
2137  try: self.this.append(this)
2138  except: self.this = this
2139  def get_version_info(self):
2140  """get_version_info(EdgePairGeometry self) -> VersionInfo"""
2141  return _IMP_core.EdgePairGeometry_get_version_info(self)
2142 
2143  def __str__(self):
2144  """__str__(EdgePairGeometry self) -> std::string"""
2145  return _IMP_core.EdgePairGeometry___str__(self)
2146 
2147  def __repr__(self):
2148  """__repr__(EdgePairGeometry self) -> std::string"""
2149  return _IMP_core.EdgePairGeometry___repr__(self)
2150 
2151  def get_from(o):
2152  return _object_cast_to_EdgePairGeometry(o)
2153  get_from = staticmethod(get_from)
2154 
2155 EdgePairGeometry_swigregister = _IMP_core.EdgePairGeometry_swigregister
2156 EdgePairGeometry_swigregister(EdgePairGeometry)
2157 
2158 class EdgePairsGeometry(IMP.display.PairsGeometry):
2159  """Proxy of C++ IMP::core::EdgePairsGeometry class"""
2160  __swig_setmethods__ = {}
2161  for _s in [IMP.display.PairsGeometry]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
2162  __setattr__ = lambda self, name, value: _swig_setattr(self, EdgePairsGeometry, name, value)
2163  __swig_getmethods__ = {}
2164  for _s in [IMP.display.PairsGeometry]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
2165  __getattr__ = lambda self, name: _swig_getattr(self, EdgePairsGeometry, name)
2166  def __init__(self, *args):
2167  """__init__(IMP::core::EdgePairsGeometry self, PairContainer sc) -> EdgePairsGeometry"""
2168  this = _IMP_core.new_EdgePairsGeometry(*args)
2169  try: self.this.append(this)
2170  except: self.this = this
2171  def get_version_info(self):
2172  """get_version_info(EdgePairsGeometry self) -> VersionInfo"""
2173  return _IMP_core.EdgePairsGeometry_get_version_info(self)
2174 
2175  def __str__(self):
2176  """__str__(EdgePairsGeometry self) -> std::string"""
2177  return _IMP_core.EdgePairsGeometry___str__(self)
2178 
2179  def __repr__(self):
2180  """__repr__(EdgePairsGeometry self) -> std::string"""
2181  return _IMP_core.EdgePairsGeometry___repr__(self)
2182 
2183  def get_from(o):
2184  return _object_cast_to_EdgePairsGeometry(o)
2185  get_from = staticmethod(get_from)
2186 
2187 EdgePairsGeometry_swigregister = _IMP_core.EdgePairsGeometry_swigregister
2188 EdgePairsGeometry_swigregister(EdgePairsGeometry)
2189 
2190 class AngleTripletScore(IMP.kernel.TripletScore):
2191  """Proxy of C++ IMP::core::AngleTripletScore class"""
2192  __swig_setmethods__ = {}
2193  for _s in [IMP.kernel.TripletScore]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
2194  __setattr__ = lambda self, name, value: _swig_setattr(self, AngleTripletScore, name, value)
2195  __swig_getmethods__ = {}
2196  for _s in [IMP.kernel.TripletScore]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
2197  __getattr__ = lambda self, name: _swig_getattr(self, AngleTripletScore, name)
2198  def __init__(self, *args):
2199  """__init__(IMP::core::AngleTripletScore self, UnaryFunction f) -> AngleTripletScore"""
2200  this = _IMP_core.new_AngleTripletScore(*args)
2201  try: self.this.append(this)
2202  except: self.this = this
2203  def do_get_inputs(self, *args):
2204  """do_get_inputs(AngleTripletScore self, Model m, IMP::kernel::ParticleIndexes const & pis) -> IMP::kernel::ModelObjectsTemp"""
2205  return _IMP_core.AngleTripletScore_do_get_inputs(self, *args)
2206 
2207  def get_version_info(self):
2208  """get_version_info(AngleTripletScore self) -> VersionInfo"""
2209  return _IMP_core.AngleTripletScore_get_version_info(self)
2210 
2211  def __str__(self):
2212  """__str__(AngleTripletScore self) -> std::string"""
2213  return _IMP_core.AngleTripletScore___str__(self)
2214 
2215  def __repr__(self):
2216  """__repr__(AngleTripletScore self) -> std::string"""
2217  return _IMP_core.AngleTripletScore___repr__(self)
2218 
2219  def get_from(o):
2220  return _object_cast_to_AngleTripletScore(o)
2221  get_from = staticmethod(get_from)
2222 
2223 AngleTripletScore_swigregister = _IMP_core.AngleTripletScore_swigregister
2224 AngleTripletScore_swigregister(AngleTripletScore)
2225 
2226 class BallMover(MonteCarloMover):
2227  """Proxy of C++ IMP::core::BallMover class"""
2228  __swig_setmethods__ = {}
2229  for _s in [MonteCarloMover]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
2230  __setattr__ = lambda self, name, value: _swig_setattr(self, BallMover, name, value)
2231  __swig_getmethods__ = {}
2232  for _s in [MonteCarloMover]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
2233  __getattr__ = lambda self, name: _swig_getattr(self, BallMover, name)
2234  def __init__(self, *args):
2235  """
2236  __init__(IMP::core::BallMover self, Model m, IMP::kernel::ParticleIndex pi, IMP::kernel::FloatKeys const & vars, double radius) -> BallMover
2237  __init__(IMP::core::BallMover self, Model m, IMP::kernel::ParticleIndex pi, double radius) -> BallMover
2238  __init__(IMP::core::BallMover self, IMP::kernel::ParticlesTemp const & sc, IMP::kernel::FloatKeys const & vars, IMP::Float radius) -> BallMover
2239  __init__(IMP::core::BallMover self, IMP::kernel::ParticlesTemp const & sc, IMP::Float radius) -> BallMover
2240  """
2241  this = _IMP_core.new_BallMover(*args)
2242  try: self.this.append(this)
2243  except: self.this = this
2244  def set_radius(self, *args):
2245  """set_radius(BallMover self, IMP::Float radius)"""
2246  return _IMP_core.BallMover_set_radius(self, *args)
2247 
2248  def get_radius(self):
2249  """get_radius(BallMover self) -> IMP::Float"""
2250  return _IMP_core.BallMover_get_radius(self)
2251 
2252  def get_version_info(self):
2253  """get_version_info(BallMover self) -> VersionInfo"""
2254  return _IMP_core.BallMover_get_version_info(self)
2255 
2256  def __str__(self):
2257  """__str__(BallMover self) -> std::string"""
2258  return _IMP_core.BallMover___str__(self)
2259 
2260  def __repr__(self):
2261  """__repr__(BallMover self) -> std::string"""
2262  return _IMP_core.BallMover___repr__(self)
2263 
2264  def get_from(o):
2265  return _object_cast_to_BallMover(o)
2266  get_from = staticmethod(get_from)
2267 
2268 BallMover_swigregister = _IMP_core.BallMover_swigregister
2269 BallMover_swigregister(BallMover)
2270 
2271 class SerialMover(MonteCarloMover):
2272  """Proxy of C++ IMP::core::SerialMover class"""
2273  __swig_setmethods__ = {}
2274  for _s in [MonteCarloMover]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
2275  __setattr__ = lambda self, name, value: _swig_setattr(self, SerialMover, name, value)
2276  __swig_getmethods__ = {}
2277  for _s in [MonteCarloMover]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
2278  __getattr__ = lambda self, name: _swig_getattr(self, SerialMover, name)
2279  def __init__(self, *args):
2280  """__init__(IMP::core::SerialMover self, IMP::core::MonteCarloMoversTemp const & mvs) -> SerialMover"""
2281  this = _IMP_core.new_SerialMover(*args)
2282  try: self.this.append(this)
2283  except: self.this = this
2284  def get_movers(self):
2285  """get_movers(SerialMover self) -> IMP::core::MonteCarloMovers const &"""
2286  return _IMP_core.SerialMover_get_movers(self)
2287 
2288  def get_version_info(self):
2289  """get_version_info(SerialMover self) -> VersionInfo"""
2290  return _IMP_core.SerialMover_get_version_info(self)
2291 
2292  def __str__(self):
2293  """__str__(SerialMover self) -> std::string"""
2294  return _IMP_core.SerialMover___str__(self)
2295 
2296  def __repr__(self):
2297  """__repr__(SerialMover self) -> std::string"""
2298  return _IMP_core.SerialMover___repr__(self)
2299 
2300  def get_from(o):
2301  return _object_cast_to_SerialMover(o)
2302  get_from = staticmethod(get_from)
2303 
2304 SerialMover_swigregister = _IMP_core.SerialMover_swigregister
2305 SerialMover_swigregister(SerialMover)
2306 
2307 class BoxSweepClosePairsFinder(ClosePairsFinder):
2308  """Proxy of C++ IMP::core::BoxSweepClosePairsFinder class"""
2309  __swig_setmethods__ = {}
2310  for _s in [ClosePairsFinder]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
2311  __setattr__ = lambda self, name, value: _swig_setattr(self, BoxSweepClosePairsFinder, name, value)
2312  __swig_getmethods__ = {}
2313  for _s in [ClosePairsFinder]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
2314  __getattr__ = lambda self, name: _swig_getattr(self, BoxSweepClosePairsFinder, name)
2315  def __init__(self):
2316  """__init__(IMP::core::BoxSweepClosePairsFinder self) -> BoxSweepClosePairsFinder"""
2317  this = _IMP_core.new_BoxSweepClosePairsFinder()
2318  try: self.this.append(this)
2319  except: self.this = this
2320  def get_close_pairs(self, *args):
2321  """
2322  get_close_pairs(BoxSweepClosePairsFinder self, IMP::kernel::ParticlesTemp const & pc) -> IMP::kernel::ParticlePairsTemp
2323  get_close_pairs(BoxSweepClosePairsFinder self, IMP::kernel::ParticlesTemp const & pca, IMP::kernel::ParticlesTemp const & pcb) -> IMP::kernel::ParticlePairsTemp
2324  get_close_pairs(BoxSweepClosePairsFinder self, IMP::algebra::BoundingBox3Ds const & bbs) -> IMP::IntPairs
2325  get_close_pairs(BoxSweepClosePairsFinder self, IMP::algebra::BoundingBox3Ds const & bas, IMP::algebra::BoundingBox3Ds const & bbs) -> IMP::IntPairs
2326  get_close_pairs(BoxSweepClosePairsFinder self, Model m, IMP::kernel::ParticleIndexes const & pc) -> IMP::kernel::ParticleIndexPairs
2327  get_close_pairs(BoxSweepClosePairsFinder self, Model m, IMP::kernel::ParticleIndexes const & pca, IMP::kernel::ParticleIndexes const & pcb) -> IMP::kernel::ParticleIndexPairs
2328  """
2329  return _IMP_core.BoxSweepClosePairsFinder_get_close_pairs(self, *args)
2330 
2331  def do_get_inputs(self, *args):
2332  """do_get_inputs(BoxSweepClosePairsFinder self, Model m, IMP::kernel::ParticleIndexes const & pis) -> IMP::kernel::ModelObjectsTemp"""
2333  return _IMP_core.BoxSweepClosePairsFinder_do_get_inputs(self, *args)
2334 
2335  def get_version_info(self):
2336  """get_version_info(BoxSweepClosePairsFinder self) -> VersionInfo"""
2337  return _IMP_core.BoxSweepClosePairsFinder_get_version_info(self)
2338 
2339  def __str__(self):
2340  """__str__(BoxSweepClosePairsFinder self) -> std::string"""
2341  return _IMP_core.BoxSweepClosePairsFinder___str__(self)
2342 
2343  def __repr__(self):
2344  """__repr__(BoxSweepClosePairsFinder self) -> std::string"""
2345  return _IMP_core.BoxSweepClosePairsFinder___repr__(self)
2346 
2347  def get_from(o):
2348  return _object_cast_to_BoxSweepClosePairsFinder(o)
2349  get_from = staticmethod(get_from)
2350 
2351 BoxSweepClosePairsFinder_swigregister = _IMP_core.BoxSweepClosePairsFinder_swigregister
2352 BoxSweepClosePairsFinder_swigregister(BoxSweepClosePairsFinder)
2353 
2354 class CentroidOfRefined(IMP.kernel.SingletonModifier):
2355  """Proxy of C++ IMP::core::CentroidOfRefined class"""
2356  __swig_setmethods__ = {}
2357  for _s in [IMP.kernel.SingletonModifier]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
2358  __setattr__ = lambda self, name, value: _swig_setattr(self, CentroidOfRefined, name, value)
2359  __swig_getmethods__ = {}
2360  for _s in [IMP.kernel.SingletonModifier]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
2361  __getattr__ = lambda self, name: _swig_getattr(self, CentroidOfRefined, name)
2362  def __init__(self, *args):
2363  """
2364  __init__(IMP::core::CentroidOfRefined self, Refiner r, FloatKey weight=FloatKey(), IMP::kernel::FloatKeys ks=IMP::core::XYZ::get_xyz_keys()) -> CentroidOfRefined
2365  __init__(IMP::core::CentroidOfRefined self, Refiner r, FloatKey weight=FloatKey()) -> CentroidOfRefined
2366  __init__(IMP::core::CentroidOfRefined self, Refiner r) -> CentroidOfRefined
2367  """
2368  this = _IMP_core.new_CentroidOfRefined(*args)
2369  try: self.this.append(this)
2370  except: self.this = this
2371  def do_get_inputs(self, *args):
2372  """do_get_inputs(CentroidOfRefined self, Model m, IMP::kernel::ParticleIndexes const & pis) -> IMP::kernel::ModelObjectsTemp"""
2373  return _IMP_core.CentroidOfRefined_do_get_inputs(self, *args)
2374 
2375  def do_get_outputs(self, *args):
2376  """do_get_outputs(CentroidOfRefined self, Model m, IMP::kernel::ParticleIndexes const & pis) -> IMP::kernel::ModelObjectsTemp"""
2377  return _IMP_core.CentroidOfRefined_do_get_outputs(self, *args)
2378 
2379  def get_version_info(self):
2380  """get_version_info(CentroidOfRefined self) -> VersionInfo"""
2381  return _IMP_core.CentroidOfRefined_get_version_info(self)
2382 
2383  def __str__(self):
2384  """__str__(CentroidOfRefined self) -> std::string"""
2385  return _IMP_core.CentroidOfRefined___str__(self)
2386 
2387  def __repr__(self):
2388  """__repr__(CentroidOfRefined self) -> std::string"""
2389  return _IMP_core.CentroidOfRefined___repr__(self)
2390 
2391  def get_from(o):
2392  return _object_cast_to_CentroidOfRefined(o)
2393  get_from = staticmethod(get_from)
2394 
2395 CentroidOfRefined_swigregister = _IMP_core.CentroidOfRefined_swigregister
2396 CentroidOfRefined_swigregister(CentroidOfRefined)
2397 
2398 class Centroid(XYZ):
2399  """Proxy of C++ IMP::core::Centroid class"""
2400  __swig_setmethods__ = {}
2401  for _s in [XYZ]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
2402  __setattr__ = lambda self, name, value: _swig_setattr(self, Centroid, name, value)
2403  __swig_getmethods__ = {}
2404  for _s in [XYZ]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
2405  __getattr__ = lambda self, name: _swig_getattr(self, Centroid, name)
2406  def get_constraint(self):
2407  """get_constraint(Centroid self) -> Constraint"""
2408  return _IMP_core.Centroid_get_constraint(self)
2409 
2410  def __init__(self, *args):
2411  """
2412  __init__(IMP::core::Centroid self) -> Centroid
2413  __init__(IMP::core::Centroid self, Model m, ::IMP::kernel::ParticleIndex id) -> Centroid
2414  __init__(IMP::core::Centroid self, _ParticleAdaptor d) -> Centroid
2415  """
2416  this = _IMP_core.new_Centroid(*args)
2417  try: self.this.append(this)
2418  except: self.this = this
2419  def show(self, *args):
2420  """
2421  show(Centroid self, _ostream out=std::cout)
2422  show(Centroid self)
2423  """
2424  return _IMP_core.Centroid_show(self, *args)
2425 
2426  def setup_particle(*args):
2427  """
2428  setup_particle(Model m, IMP::kernel::ParticleIndex pi, _ParticleIndexesAdaptor members) -> Centroid
2429  setup_particle(_ParticleAdaptor decorator, _ParticleIndexesAdaptor members) -> Centroid
2430  setup_particle(Model m, IMP::kernel::ParticleIndex pi, Refiner refiner) -> Centroid
2431  setup_particle(_ParticleAdaptor decorator, Refiner refiner) -> Centroid
2432  """
2433  return _IMP_core.Centroid_setup_particle(*args)
2434 
2435  if _newclass:setup_particle = staticmethod(setup_particle)
2436  __swig_getmethods__["setup_particle"] = lambda x: setup_particle
2437  def get_is_setup(*args):
2438  """
2439  get_is_setup(_ParticleAdaptor p) -> bool
2440  get_is_setup(Model m, IMP::kernel::ParticleIndex pi) -> bool
2441  """
2442  return _IMP_core.Centroid_get_is_setup(*args)
2443 
2444  if _newclass:get_is_setup = staticmethod(get_is_setup)
2445  __swig_getmethods__["get_is_setup"] = lambda x: get_is_setup
2446  def add_attribute(self, *args):
2447  """
2448  add_attribute(Centroid self, FloatKey k, IMP::Float v, bool opt)
2449  add_attribute(Centroid self, FloatKey a0, IMP::Float a1)
2450  add_attribute(Centroid self, IntKey a0, IMP::Int a1)
2451  add_attribute(Centroid self, StringKey a0, IMP::String a1)
2452  add_attribute(Centroid self, ParticleIndexKey a0, Particle a1)
2453  add_attribute(Centroid self, ObjectKey a0, Object a1)
2454  """
2455  return _IMP_core.Centroid_add_attribute(self, *args)
2456 
2457  def get_value(self, *args):
2458  """
2459  get_value(Centroid self, FloatKey a0) -> IMP::Float
2460  get_value(Centroid self, IntKey a0) -> IMP::Int
2461  get_value(Centroid self, StringKey a0) -> IMP::String
2462  get_value(Centroid self, ParticleIndexKey a0) -> Particle
2463  get_value(Centroid self, ObjectKey a0) -> Object
2464  """
2465  return _IMP_core.Centroid_get_value(self, *args)
2466 
2467  def set_value(self, *args):
2468  """
2469  set_value(Centroid self, FloatKey a0, IMP::Float a1)
2470  set_value(Centroid self, IntKey a0, IMP::Int a1)
2471  set_value(Centroid self, StringKey a0, IMP::String a1)
2472  set_value(Centroid self, ParticleIndexKey a0, Particle a1)
2473  set_value(Centroid self, ObjectKey a0, Object a1)
2474  """
2475  return _IMP_core.Centroid_set_value(self, *args)
2476 
2477  def remove_attribute(self, *args):
2478  """
2479  remove_attribute(Centroid self, FloatKey a0)
2480  remove_attribute(Centroid self, IntKey a0)
2481  remove_attribute(Centroid self, StringKey a0)
2482  remove_attribute(Centroid self, ParticleIndexKey a0)
2483  remove_attribute(Centroid self, ObjectKey a0)
2484  """
2485  return _IMP_core.Centroid_remove_attribute(self, *args)
2486 
2487  def has_attribute(self, *args):
2488  """
2489  has_attribute(Centroid self, FloatKey a0) -> bool
2490  has_attribute(Centroid self, IntKey a0) -> bool
2491  has_attribute(Centroid self, StringKey a0) -> bool
2492  has_attribute(Centroid self, ParticleIndexKey a0) -> bool
2493  has_attribute(Centroid self, ObjectKey a0) -> bool
2494  """
2495  return _IMP_core.Centroid_has_attribute(self, *args)
2496 
2497  def get_derivative(self, *args):
2498  """get_derivative(Centroid self, FloatKey a0) -> double"""
2499  return _IMP_core.Centroid_get_derivative(self, *args)
2500 
2501  def get_name(self):
2502  """get_name(Centroid self) -> std::string"""
2503  return _IMP_core.Centroid_get_name(self)
2504 
2505  def clear_caches(self):
2506  """clear_caches(Centroid self)"""
2507  return _IMP_core.Centroid_clear_caches(self)
2508 
2509  def set_name(self, *args):
2510  """set_name(Centroid self, std::string a0)"""
2511  return _IMP_core.Centroid_set_name(self, *args)
2512 
2513  def set_check_level(self, *args):
2514  """set_check_level(Centroid self, IMP::base::CheckLevel a0)"""
2515  return _IMP_core.Centroid_set_check_level(self, *args)
2516 
2517  def add_to_derivative(self, *args):
2518  """add_to_derivative(Centroid self, FloatKey a0, double a1, DerivativeAccumulator a2)"""
2519  return _IMP_core.Centroid_add_to_derivative(self, *args)
2520 
2521  def set_is_optimized(self, *args):
2522  """set_is_optimized(Centroid self, FloatKey a0, bool a1)"""
2523  return _IMP_core.Centroid_set_is_optimized(self, *args)
2524 
2525  def get_is_optimized(self, *args):
2526  """get_is_optimized(Centroid self, FloatKey a0) -> bool"""
2527  return _IMP_core.Centroid_get_is_optimized(self, *args)
2528 
2529  def get_check_level(self):
2530  """get_check_level(Centroid self) -> IMP::base::CheckLevel"""
2531  return _IMP_core.Centroid_get_check_level(self)
2532 
2533  def __eq__(self, *args):
2534  """
2535  __eq__(Centroid self, Centroid o) -> bool
2536  __eq__(Centroid self, Particle d) -> bool
2537  """
2538  return _IMP_core.Centroid___eq__(self, *args)
2539 
2540  def __ne__(self, *args):
2541  """
2542  __ne__(Centroid self, Centroid o) -> bool
2543  __ne__(Centroid self, Particle d) -> bool
2544  """
2545  return _IMP_core.Centroid___ne__(self, *args)
2546 
2547  def __le__(self, *args):
2548  """
2549  __le__(Centroid self, Centroid o) -> bool
2550  __le__(Centroid self, Particle d) -> bool
2551  """
2552  return _IMP_core.Centroid___le__(self, *args)
2553 
2554  def __lt__(self, *args):
2555  """
2556  __lt__(Centroid self, Centroid o) -> bool
2557  __lt__(Centroid self, Particle d) -> bool
2558  """
2559  return _IMP_core.Centroid___lt__(self, *args)
2560 
2561  def __ge__(self, *args):
2562  """
2563  __ge__(Centroid self, Centroid o) -> bool
2564  __ge__(Centroid self, Particle d) -> bool
2565  """
2566  return _IMP_core.Centroid___ge__(self, *args)
2567 
2568  def __gt__(self, *args):
2569  """
2570  __gt__(Centroid self, Centroid o) -> bool
2571  __gt__(Centroid self, Particle d) -> bool
2572  """
2573  return _IMP_core.Centroid___gt__(self, *args)
2574 
2575  def __str__(self):
2576  """__str__(Centroid self) -> std::string"""
2577  return _IMP_core.Centroid___str__(self)
2578 
2579  def __repr__(self):
2580  """__repr__(Centroid self) -> std::string"""
2581  return _IMP_core.Centroid___repr__(self)
2582 
2583  __swig_destroy__ = _IMP_core.delete_Centroid
2584  __del__ = lambda self : None;
2585 Centroid_swigregister = _IMP_core.Centroid_swigregister
2586 Centroid_swigregister(Centroid)
2587 
2588 def Centroid_setup_particle(*args):
2589  """
2590  setup_particle(Model m, IMP::kernel::ParticleIndex pi, _ParticleIndexesAdaptor members) -> Centroid
2591  setup_particle(_ParticleAdaptor decorator, _ParticleIndexesAdaptor members) -> Centroid
2592  setup_particle(Model m, IMP::kernel::ParticleIndex pi, Refiner refiner) -> Centroid
2593  Centroid_setup_particle(_ParticleAdaptor decorator, Refiner refiner) -> Centroid
2594  """
2595  return _IMP_core.Centroid_setup_particle(*args)
2596 
2597 def Centroid_get_is_setup(*args):
2598  """
2599  get_is_setup(_ParticleAdaptor p) -> bool
2600  Centroid_get_is_setup(Model m, IMP::kernel::ParticleIndex pi) -> bool
2601  """
2602  return _IMP_core.Centroid_get_is_setup(*args)
2603 
2604 class ChecksScoreState(IMP.kernel.ScoreState):
2605  """Proxy of C++ IMP::core::ChecksScoreState class"""
2606  __swig_setmethods__ = {}
2607  for _s in [IMP.kernel.ScoreState]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
2608  __setattr__ = lambda self, name, value: _swig_setattr(self, ChecksScoreState, name, value)
2609  __swig_getmethods__ = {}
2610  for _s in [IMP.kernel.ScoreState]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
2611  __getattr__ = lambda self, name: _swig_getattr(self, ChecksScoreState, name)
2612  def __init__(self, *args):
2613  """__init__(IMP::core::ChecksScoreState self, Model m, double probability) -> ChecksScoreState"""
2614  this = _IMP_core.new_ChecksScoreState(*args)
2615  try: self.this.append(this)
2616  except: self.this = this
2617  def get_number_of_checked(self):
2618  """get_number_of_checked(ChecksScoreState self) -> unsigned int"""
2619  return _IMP_core.ChecksScoreState_get_number_of_checked(self)
2620 
2621  def do_before_evaluate(self):
2622  """do_before_evaluate(ChecksScoreState self)"""
2623  return _IMP_core.ChecksScoreState_do_before_evaluate(self)
2624 
2625  def do_after_evaluate(self, *args):
2626  """do_after_evaluate(ChecksScoreState self, DerivativeAccumulator da)"""
2627  return _IMP_core.ChecksScoreState_do_after_evaluate(self, *args)
2628 
2629  def do_get_outputs(self):
2630  """do_get_outputs(ChecksScoreState self) -> IMP::kernel::ModelObjectsTemp"""
2631  return _IMP_core.ChecksScoreState_do_get_outputs(self)
2632 
2633  def do_get_inputs(self):
2634  """do_get_inputs(ChecksScoreState self) -> IMP::kernel::ModelObjectsTemp"""
2635  return _IMP_core.ChecksScoreState_do_get_inputs(self)
2636 
2637  def get_version_info(self):
2638  """get_version_info(ChecksScoreState self) -> VersionInfo"""
2639  return _IMP_core.ChecksScoreState_get_version_info(self)
2640 
2641  def __str__(self):
2642  """__str__(ChecksScoreState self) -> std::string"""
2643  return _IMP_core.ChecksScoreState___str__(self)
2644 
2645  def __repr__(self):
2646  """__repr__(ChecksScoreState self) -> std::string"""
2647  return _IMP_core.ChecksScoreState___repr__(self)
2648 
2649  def get_from(o):
2650  return _object_cast_to_ChecksScoreState(o)
2651  get_from = staticmethod(get_from)
2652 
2653 ChecksScoreState_swigregister = _IMP_core.ChecksScoreState_swigregister
2654 ChecksScoreState_swigregister(ChecksScoreState)
2655 
2656 class ChildrenRefiner(IMP.kernel.Refiner):
2657  """Proxy of C++ IMP::core::ChildrenRefiner class"""
2658  __swig_setmethods__ = {}
2659  for _s in [IMP.kernel.Refiner]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
2660  __setattr__ = lambda self, name, value: _swig_setattr(self, ChildrenRefiner, name, value)
2661  __swig_getmethods__ = {}
2662  for _s in [IMP.kernel.Refiner]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
2663  __getattr__ = lambda self, name: _swig_getattr(self, ChildrenRefiner, name)
2664  def __init__(self, *args):
2665  """__init__(IMP::core::ChildrenRefiner self, HierarchyTraits tr) -> ChildrenRefiner"""
2666  this = _IMP_core.new_ChildrenRefiner(*args)
2667  try: self.this.append(this)
2668  except: self.this = this
2669  def do_get_inputs(self, *args):
2670  """do_get_inputs(ChildrenRefiner self, Model m, IMP::kernel::ParticleIndexes const & pis) -> IMP::kernel::ModelObjectsTemp"""
2671  return _IMP_core.ChildrenRefiner_do_get_inputs(self, *args)
2672 
2673  def get_version_info(self):
2674  """get_version_info(ChildrenRefiner self) -> VersionInfo"""
2675  return _IMP_core.ChildrenRefiner_get_version_info(self)
2676 
2677  def __str__(self):
2678  """__str__(ChildrenRefiner self) -> std::string"""
2679  return _IMP_core.ChildrenRefiner___str__(self)
2680 
2681  def __repr__(self):
2682  """__repr__(ChildrenRefiner self) -> std::string"""
2683  return _IMP_core.ChildrenRefiner___repr__(self)
2684 
2685  def get_from(o):
2686  return _object_cast_to_ChildrenRefiner(o)
2687  get_from = staticmethod(get_from)
2688 
2689 ChildrenRefiner_swigregister = _IMP_core.ChildrenRefiner_swigregister
2690 ChildrenRefiner_swigregister(ChildrenRefiner)
2691 
2692 class ClosedCubicSpline(IMP.kernel.UnaryFunction):
2693  """Proxy of C++ IMP::core::ClosedCubicSpline class"""
2694  __swig_setmethods__ = {}
2695  for _s in [IMP.kernel.UnaryFunction]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
2696  __setattr__ = lambda self, name, value: _swig_setattr(self, ClosedCubicSpline, name, value)
2697  __swig_getmethods__ = {}
2698  for _s in [IMP.kernel.UnaryFunction]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
2699  __getattr__ = lambda self, name: _swig_getattr(self, ClosedCubicSpline, name)
2700  def __init__(self, *args):
2701  """__init__(IMP::core::ClosedCubicSpline self, IMP::Floats const & values, double minrange, double spacing) -> ClosedCubicSpline"""
2702  this = _IMP_core.new_ClosedCubicSpline(*args)
2703  try: self.this.append(this)
2704  except: self.this = this
2705  def get_version_info(self):
2706  """get_version_info(ClosedCubicSpline self) -> VersionInfo"""
2707  return _IMP_core.ClosedCubicSpline_get_version_info(self)
2708 
2709  def do_show(self, *args):
2710  """do_show(ClosedCubicSpline self, _ostream out)"""
2711  return _IMP_core.ClosedCubicSpline_do_show(self, *args)
2712 
2713  def __str__(self):
2714  """__str__(ClosedCubicSpline self) -> std::string"""
2715  return _IMP_core.ClosedCubicSpline___str__(self)
2716 
2717  def __repr__(self):
2718  """__repr__(ClosedCubicSpline self) -> std::string"""
2719  return _IMP_core.ClosedCubicSpline___repr__(self)
2720 
2721  def get_from(o):
2722  return _object_cast_to_ClosedCubicSpline(o)
2723  get_from = staticmethod(get_from)
2724 
2725 ClosedCubicSpline_swigregister = _IMP_core.ClosedCubicSpline_swigregister
2726 ClosedCubicSpline_swigregister(ClosedCubicSpline)
2727 
2728 class KClosePairsPairScore(IMP.kernel.PairScore):
2729  """Proxy of C++ IMP::core::KClosePairsPairScore class"""
2730  __swig_setmethods__ = {}
2731  for _s in [IMP.kernel.PairScore]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
2732  __setattr__ = lambda self, name, value: _swig_setattr(self, KClosePairsPairScore, name, value)
2733  __swig_getmethods__ = {}
2734  for _s in [IMP.kernel.PairScore]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
2735  __getattr__ = lambda self, name: _swig_getattr(self, KClosePairsPairScore, name)
2736  def __init__(self, *args):
2737  """
2738  __init__(IMP::core::KClosePairsPairScore self, PairScore f, Refiner r, int k=1) -> KClosePairsPairScore
2739  __init__(IMP::core::KClosePairsPairScore self, PairScore f, Refiner r) -> KClosePairsPairScore
2740  """
2741  this = _IMP_core.new_KClosePairsPairScore(*args)
2742  try: self.this.append(this)
2743  except: self.this = this
2744  def get_close_pairs(self, *args):
2745  """get_close_pairs(KClosePairsPairScore self, IMP::kernel::ParticlePair const & pp) -> IMP::kernel::ParticlePairsTemp"""
2746  return _IMP_core.KClosePairsPairScore_get_close_pairs(self, *args)
2747 
2748  def create_current_decomposition(self, *args):
2749  """create_current_decomposition(KClosePairsPairScore self, Model m, IMP::kernel::ParticleIndexPair const & vt) -> IMP::kernel::Restraints"""
2750  return _IMP_core.KClosePairsPairScore_create_current_decomposition(self, *args)
2751 
2752  def do_get_inputs(self, *args):
2753  """do_get_inputs(KClosePairsPairScore self, Model m, IMP::kernel::ParticleIndexes const & pis) -> IMP::kernel::ModelObjectsTemp"""
2754  return _IMP_core.KClosePairsPairScore_do_get_inputs(self, *args)
2755 
2756  def get_version_info(self):
2757  """get_version_info(KClosePairsPairScore self) -> VersionInfo"""
2758  return _IMP_core.KClosePairsPairScore_get_version_info(self)
2759 
2760  def __str__(self):
2761  """__str__(KClosePairsPairScore self) -> std::string"""
2762  return _IMP_core.KClosePairsPairScore___str__(self)
2763 
2764  def __repr__(self):
2765  """__repr__(KClosePairsPairScore self) -> std::string"""
2766  return _IMP_core.KClosePairsPairScore___repr__(self)
2767 
2768  def get_from(o):
2769  return _object_cast_to_KClosePairsPairScore(o)
2770  get_from = staticmethod(get_from)
2771 
2772 KClosePairsPairScore_swigregister = _IMP_core.KClosePairsPairScore_swigregister
2773 KClosePairsPairScore_swigregister(KClosePairsPairScore)
2774 
2775 class ClosePairsPairScore(IMP.kernel.PairScore):
2776  """Proxy of C++ IMP::core::ClosePairsPairScore class"""
2777  __swig_setmethods__ = {}
2778  for _s in [IMP.kernel.PairScore]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
2779  __setattr__ = lambda self, name, value: _swig_setattr(self, ClosePairsPairScore, name, value)
2780  __swig_getmethods__ = {}
2781  for _s in [IMP.kernel.PairScore]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
2782  __getattr__ = lambda self, name: _swig_getattr(self, ClosePairsPairScore, name)
2783  def __init__(self, *args):
2784  """__init__(IMP::core::ClosePairsPairScore self, PairScore f, Refiner r, IMP::Float max_distance) -> ClosePairsPairScore"""
2785  this = _IMP_core.new_ClosePairsPairScore(*args)
2786  try: self.this.append(this)
2787  except: self.this = this
2788  def get_close_pairs(self, *args):
2789  """get_close_pairs(ClosePairsPairScore self, IMP::kernel::ParticlePair const & pp) -> IMP::kernel::ParticlePairsTemp"""
2790  return _IMP_core.ClosePairsPairScore_get_close_pairs(self, *args)
2791 
2792  def create_current_decomposition(self, *args):
2793  """create_current_decomposition(ClosePairsPairScore self, Model m, IMP::kernel::ParticleIndexPair const & vt) -> IMP::kernel::Restraints"""
2794  return _IMP_core.ClosePairsPairScore_create_current_decomposition(self, *args)
2795 
2796  def do_get_inputs(self, *args):
2797  """do_get_inputs(ClosePairsPairScore self, Model m, IMP::kernel::ParticleIndexes const & pis) -> IMP::kernel::ModelObjectsTemp"""
2798  return _IMP_core.ClosePairsPairScore_do_get_inputs(self, *args)
2799 
2800  def get_version_info(self):
2801  """get_version_info(ClosePairsPairScore self) -> VersionInfo"""
2802  return _IMP_core.ClosePairsPairScore_get_version_info(self)
2803 
2804  def __str__(self):
2805  """__str__(ClosePairsPairScore self) -> std::string"""
2806  return _IMP_core.ClosePairsPairScore___str__(self)
2807 
2808  def __repr__(self):
2809  """__repr__(ClosePairsPairScore self) -> std::string"""
2810  return _IMP_core.ClosePairsPairScore___repr__(self)
2811 
2812  def get_from(o):
2813  return _object_cast_to_ClosePairsPairScore(o)
2814  get_from = staticmethod(get_from)
2815 
2816 ClosePairsPairScore_swigregister = _IMP_core.ClosePairsPairScore_swigregister
2817 ClosePairsPairScore_swigregister(ClosePairsPairScore)
2818 
2819 class ConjugateGradients(IMP.kernel.AttributeOptimizer):
2820  """Proxy of C++ IMP::core::ConjugateGradients class"""
2821  __swig_setmethods__ = {}
2822  for _s in [IMP.kernel.AttributeOptimizer]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
2823  __setattr__ = lambda self, name, value: _swig_setattr(self, ConjugateGradients, name, value)
2824  __swig_getmethods__ = {}
2825  for _s in [IMP.kernel.AttributeOptimizer]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
2826  __getattr__ = lambda self, name: _swig_getattr(self, ConjugateGradients, name)
2827  def __init__(self, *args):
2828  """
2829  __init__(IMP::core::ConjugateGradients self, Model m, std::string name="ConjugateGradients%1%") -> ConjugateGradients
2830  __init__(IMP::core::ConjugateGradients self, Model m) -> ConjugateGradients
2831  """
2832  this = _IMP_core.new_ConjugateGradients(*args)
2833  try: self.this.append(this)
2834  except: self.this = this
2835  def set_gradient_threshold(self, *args):
2836  """set_gradient_threshold(ConjugateGradients self, IMP::Float t)"""
2837  return _IMP_core.ConjugateGradients_set_gradient_threshold(self, *args)
2838 
2839  def set_threshold(self, *args):
2840  """set_threshold(ConjugateGradients self, IMP::Float t)"""
2841  return _IMP_core.ConjugateGradients_set_threshold(self, *args)
2842 
2843  def set_max_change(self, *args):
2844  """set_max_change(ConjugateGradients self, IMP::Float t)"""
2845  return _IMP_core.ConjugateGradients_set_max_change(self, *args)
2846 
2847  def do_optimize(self, *args):
2848  """do_optimize(ConjugateGradients self, unsigned int max_steps) -> IMP::Float"""
2849  return _IMP_core.ConjugateGradients_do_optimize(self, *args)
2850 
2851  def get_version_info(self):
2852  """get_version_info(ConjugateGradients self) -> VersionInfo"""
2853  return _IMP_core.ConjugateGradients_get_version_info(self)
2854 
2855  def __str__(self):
2856  """__str__(ConjugateGradients self) -> std::string"""
2857  return _IMP_core.ConjugateGradients___str__(self)
2858 
2859  def __repr__(self):
2860  """__repr__(ConjugateGradients self) -> std::string"""
2861  return _IMP_core.ConjugateGradients___repr__(self)
2862 
2863  def get_from(o):
2864  return _object_cast_to_ConjugateGradients(o)
2865  get_from = staticmethod(get_from)
2866 
2867 ConjugateGradients_swigregister = _IMP_core.ConjugateGradients_swigregister
2868 ConjugateGradients_swigregister(ConjugateGradients)
2869 
2870 class ConnectivityRestraint(IMP.kernel.Restraint):
2871  """Proxy of C++ IMP::core::ConnectivityRestraint class"""
2872  __swig_setmethods__ = {}
2873  for _s in [IMP.kernel.Restraint]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
2874  __setattr__ = lambda self, name, value: _swig_setattr(self, ConnectivityRestraint, name, value)
2875  __swig_getmethods__ = {}
2876  for _s in [IMP.kernel.Restraint]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
2877  __getattr__ = lambda self, name: _swig_getattr(self, ConnectivityRestraint, name)
2878  def __init__(self, *args):
2879  """
2880  __init__(IMP::core::ConnectivityRestraint self, PairScore ps, _SingletonContainerAdaptor sc) -> ConnectivityRestraint
2881  __init__(IMP::core::ConnectivityRestraint self, Model m, PairScore ps) -> ConnectivityRestraint
2882  """
2883  this = _IMP_core.new_ConnectivityRestraint(*args)
2884  try: self.this.append(this)
2885  except: self.this = this
2886  def add_particle(self, *args):
2887  """add_particle(ConnectivityRestraint self, Particle p)"""
2888  return _IMP_core.ConnectivityRestraint_add_particle(self, *args)
2889 
2890  def add_particles(self, *args):
2891  """add_particles(ConnectivityRestraint self, IMP::kernel::ParticlesTemp const & ps)"""
2892  return _IMP_core.ConnectivityRestraint_add_particles(self, *args)
2893 
2894  def set_particles(self, *args):
2895  """set_particles(ConnectivityRestraint self, IMP::kernel::ParticlesTemp const & ps)"""
2896  return _IMP_core.ConnectivityRestraint_set_particles(self, *args)
2897 
2898  def get_connected_pairs(self):
2899  """get_connected_pairs(ConnectivityRestraint self) -> IMP::kernel::ParticlePairsTemp"""
2900  return _IMP_core.ConnectivityRestraint_get_connected_pairs(self)
2901 
2902  def get_pair_score(self):
2903  """get_pair_score(ConnectivityRestraint self) -> PairScore"""
2904  return _IMP_core.ConnectivityRestraint_get_pair_score(self)
2905 
2906  def do_create_current_decomposition(self):
2907  """do_create_current_decomposition(ConnectivityRestraint self) -> IMP::kernel::Restraints"""
2908  return _IMP_core.ConnectivityRestraint_do_create_current_decomposition(self)
2909 
2910  def do_get_inputs(self):
2911  """do_get_inputs(ConnectivityRestraint self) -> IMP::kernel::ModelObjectsTemp"""
2912  return _IMP_core.ConnectivityRestraint_do_get_inputs(self)
2913 
2914  def get_version_info(self):
2915  """get_version_info(ConnectivityRestraint self) -> VersionInfo"""
2916  return _IMP_core.ConnectivityRestraint_get_version_info(self)
2917 
2918  def __str__(self):
2919  """__str__(ConnectivityRestraint self) -> std::string"""
2920  return _IMP_core.ConnectivityRestraint___str__(self)
2921 
2922  def __repr__(self):
2923  """__repr__(ConnectivityRestraint self) -> std::string"""
2924  return _IMP_core.ConnectivityRestraint___repr__(self)
2925 
2926  def get_from(o):
2927  return _object_cast_to_ConnectivityRestraint(o)
2928  get_from = staticmethod(get_from)
2929 
2930 ConnectivityRestraint_swigregister = _IMP_core.ConnectivityRestraint_swigregister
2931 ConnectivityRestraint_swigregister(ConnectivityRestraint)
2932 
2933 class ConstantRestraint(IMP.kernel.Restraint):
2934  """Proxy of C++ IMP::core::ConstantRestraint class"""
2935  __swig_setmethods__ = {}
2936  for _s in [IMP.kernel.Restraint]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
2937  __setattr__ = lambda self, name, value: _swig_setattr(self, ConstantRestraint, name, value)
2938  __swig_getmethods__ = {}
2939  for _s in [IMP.kernel.Restraint]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
2940  __getattr__ = lambda self, name: _swig_getattr(self, ConstantRestraint, name)
2941  def __init__(self, *args):
2942  """__init__(IMP::core::ConstantRestraint self, Model m, IMP::Float v) -> ConstantRestraint"""
2943  this = _IMP_core.new_ConstantRestraint(*args)
2944  try: self.this.append(this)
2945  except: self.this = this
2946  def do_get_inputs(self):
2947  """do_get_inputs(ConstantRestraint self) -> IMP::kernel::ModelObjectsTemp"""
2948  return _IMP_core.ConstantRestraint_do_get_inputs(self)
2949 
2950  def get_version_info(self):
2951  """get_version_info(ConstantRestraint self) -> VersionInfo"""
2952  return _IMP_core.ConstantRestraint_get_version_info(self)
2953 
2954  def __str__(self):
2955  """__str__(ConstantRestraint self) -> std::string"""
2956  return _IMP_core.ConstantRestraint___str__(self)
2957 
2958  def __repr__(self):
2959  """__repr__(ConstantRestraint self) -> std::string"""
2960  return _IMP_core.ConstantRestraint___repr__(self)
2961 
2962  def get_from(o):
2963  return _object_cast_to_ConstantRestraint(o)
2964  get_from = staticmethod(get_from)
2965 
2966 ConstantRestraint_swigregister = _IMP_core.ConstantRestraint_swigregister
2967 ConstantRestraint_swigregister(ConstantRestraint)
2968 
2969 class Cosine(IMP.kernel.UnaryFunction):
2970  """Proxy of C++ IMP::core::Cosine class"""
2971  __swig_setmethods__ = {}
2972  for _s in [IMP.kernel.UnaryFunction]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
2973  __setattr__ = lambda self, name, value: _swig_setattr(self, Cosine, name, value)
2974  __swig_getmethods__ = {}
2975  for _s in [IMP.kernel.UnaryFunction]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
2976  __getattr__ = lambda self, name: _swig_getattr(self, Cosine, name)
2977  def __init__(self, *args):
2978  """__init__(IMP::core::Cosine self, IMP::Float force_constant, int periodicity, IMP::Float phase) -> Cosine"""
2979  this = _IMP_core.new_Cosine(*args)
2980  try: self.this.append(this)
2981  except: self.this = this
2982  def get_version_info(self):
2983  """get_version_info(Cosine self) -> VersionInfo"""
2984  return _IMP_core.Cosine_get_version_info(self)
2985 
2986  def do_show(self, *args):
2987  """do_show(Cosine self, _ostream out)"""
2988  return _IMP_core.Cosine_do_show(self, *args)
2989 
2990  def __str__(self):
2991  """__str__(Cosine self) -> std::string"""
2992  return _IMP_core.Cosine___str__(self)
2993 
2994  def __repr__(self):
2995  """__repr__(Cosine self) -> std::string"""
2996  return _IMP_core.Cosine___repr__(self)
2997 
2998  def get_from(o):
2999  return _object_cast_to_Cosine(o)
3000  get_from = staticmethod(get_from)
3001 
3002 Cosine_swigregister = _IMP_core.Cosine_swigregister
3003 Cosine_swigregister(Cosine)
3004 
3005 class CoverRefined(IMP.kernel.SingletonModifier):
3006  """Proxy of C++ IMP::core::CoverRefined class"""
3007  __swig_setmethods__ = {}
3008  for _s in [IMP.kernel.SingletonModifier]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
3009  __setattr__ = lambda self, name, value: _swig_setattr(self, CoverRefined, name, value)
3010  __swig_getmethods__ = {}
3011  for _s in [IMP.kernel.SingletonModifier]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
3012  __getattr__ = lambda self, name: _swig_getattr(self, CoverRefined, name)
3013  def __init__(self, *args):
3014  """
3015  __init__(IMP::core::CoverRefined self, Refiner ref, IMP::Float slack=0) -> CoverRefined
3016  __init__(IMP::core::CoverRefined self, Refiner ref) -> CoverRefined
3017  """
3018  this = _IMP_core.new_CoverRefined(*args)
3019  try: self.this.append(this)
3020  except: self.this = this
3021  def set_slack(self, *args):
3022  """set_slack(CoverRefined self, IMP::Float slack)"""
3023  return _IMP_core.CoverRefined_set_slack(self, *args)
3024 
3025  def do_get_inputs(self, *args):
3026  """do_get_inputs(CoverRefined self, Model m, IMP::kernel::ParticleIndexes const & pis) -> IMP::kernel::ModelObjectsTemp"""
3027  return _IMP_core.CoverRefined_do_get_inputs(self, *args)
3028 
3029  def do_get_outputs(self, *args):
3030  """do_get_outputs(CoverRefined self, Model m, IMP::kernel::ParticleIndexes const & pis) -> IMP::kernel::ModelObjectsTemp"""
3031  return _IMP_core.CoverRefined_do_get_outputs(self, *args)
3032 
3033  def get_version_info(self):
3034  """get_version_info(CoverRefined self) -> VersionInfo"""
3035  return _IMP_core.CoverRefined_get_version_info(self)
3036 
3037  def __str__(self):
3038  """__str__(CoverRefined self) -> std::string"""
3039  return _IMP_core.CoverRefined___str__(self)
3040 
3041  def __repr__(self):
3042  """__repr__(CoverRefined self) -> std::string"""
3043  return _IMP_core.CoverRefined___repr__(self)
3044 
3045  def get_from(o):
3046  return _object_cast_to_CoverRefined(o)
3047  get_from = staticmethod(get_from)
3048 
3049 CoverRefined_swigregister = _IMP_core.CoverRefined_swigregister
3050 CoverRefined_swigregister(CoverRefined)
3051 
3052 class Cover(XYZR):
3053  """Proxy of C++ IMP::core::Cover class"""
3054  __swig_setmethods__ = {}
3055  for _s in [XYZR]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
3056  __setattr__ = lambda self, name, value: _swig_setattr(self, Cover, name, value)
3057  __swig_getmethods__ = {}
3058  for _s in [XYZR]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
3059  __getattr__ = lambda self, name: _swig_getattr(self, Cover, name)
3060  def get_constraint(self):
3061  """get_constraint(Cover self) -> Constraint"""
3062  return _IMP_core.Cover_get_constraint(self)
3063 
3064  def __init__(self, *args):
3065  """
3066  __init__(IMP::core::Cover self) -> Cover
3067  __init__(IMP::core::Cover self, Model m, ::IMP::kernel::ParticleIndex id) -> Cover
3068  __init__(IMP::core::Cover self, _ParticleAdaptor d) -> Cover
3069  """
3070  this = _IMP_core.new_Cover(*args)
3071  try: self.this.append(this)
3072  except: self.this = this
3073  def show(self, *args):
3074  """
3075  show(Cover self, _ostream out=std::cout)
3076  show(Cover self)
3077  """
3078  return _IMP_core.Cover_show(self, *args)
3079 
3080  def setup_particle(*args):
3081  """
3082  setup_particle(Model m, IMP::kernel::ParticleIndex pi, _ParticleIndexesAdaptor members) -> Cover
3083  setup_particle(_ParticleAdaptor decorator, _ParticleIndexesAdaptor members) -> Cover
3084  setup_particle(Model m, IMP::kernel::ParticleIndex pi, Refiner refiner) -> Cover
3085  setup_particle(_ParticleAdaptor decorator, Refiner refiner) -> Cover
3086  """
3087  return _IMP_core.Cover_setup_particle(*args)
3088 
3089  if _newclass:setup_particle = staticmethod(setup_particle)
3090  __swig_getmethods__["setup_particle"] = lambda x: setup_particle
3091  def get_is_setup(*args):
3092  """
3093  get_is_setup(_ParticleAdaptor p) -> bool
3094  get_is_setup(Model m, IMP::kernel::ParticleIndex pi) -> bool
3095  """
3096  return _IMP_core.Cover_get_is_setup(*args)
3097 
3098  if _newclass:get_is_setup = staticmethod(get_is_setup)
3099  __swig_getmethods__["get_is_setup"] = lambda x: get_is_setup
3100  def add_attribute(self, *args):
3101  """
3102  add_attribute(Cover self, FloatKey k, IMP::Float v, bool opt)
3103  add_attribute(Cover self, FloatKey a0, IMP::Float a1)
3104  add_attribute(Cover self, IntKey a0, IMP::Int a1)
3105  add_attribute(Cover self, StringKey a0, IMP::String a1)
3106  add_attribute(Cover self, ParticleIndexKey a0, Particle a1)
3107  add_attribute(Cover self, ObjectKey a0, Object a1)
3108  """
3109  return _IMP_core.Cover_add_attribute(self, *args)
3110 
3111  def get_value(self, *args):
3112  """
3113  get_value(Cover self, FloatKey a0) -> IMP::Float
3114  get_value(Cover self, IntKey a0) -> IMP::Int
3115  get_value(Cover self, StringKey a0) -> IMP::String
3116  get_value(Cover self, ParticleIndexKey a0) -> Particle
3117  get_value(Cover self, ObjectKey a0) -> Object
3118  """
3119  return _IMP_core.Cover_get_value(self, *args)
3120 
3121  def set_value(self, *args):
3122  """
3123  set_value(Cover self, FloatKey a0, IMP::Float a1)
3124  set_value(Cover self, IntKey a0, IMP::Int a1)
3125  set_value(Cover self, StringKey a0, IMP::String a1)
3126  set_value(Cover self, ParticleIndexKey a0, Particle a1)
3127  set_value(Cover self, ObjectKey a0, Object a1)
3128  """
3129  return _IMP_core.Cover_set_value(self, *args)
3130 
3131  def remove_attribute(self, *args):
3132  """
3133  remove_attribute(Cover self, FloatKey a0)
3134  remove_attribute(Cover self, IntKey a0)
3135  remove_attribute(Cover self, StringKey a0)
3136  remove_attribute(Cover self, ParticleIndexKey a0)
3137  remove_attribute(Cover self, ObjectKey a0)
3138  """
3139  return _IMP_core.Cover_remove_attribute(self, *args)
3140 
3141  def has_attribute(self, *args):
3142  """
3143  has_attribute(Cover self, FloatKey a0) -> bool
3144  has_attribute(Cover self, IntKey a0) -> bool
3145  has_attribute(Cover self, StringKey a0) -> bool
3146  has_attribute(Cover self, ParticleIndexKey a0) -> bool
3147  has_attribute(Cover self, ObjectKey a0) -> bool
3148  """
3149  return _IMP_core.Cover_has_attribute(self, *args)
3150 
3151  def get_derivative(self, *args):
3152  """get_derivative(Cover self, FloatKey a0) -> double"""
3153  return _IMP_core.Cover_get_derivative(self, *args)
3154 
3155  def get_name(self):
3156  """get_name(Cover self) -> std::string"""
3157  return _IMP_core.Cover_get_name(self)
3158 
3159  def clear_caches(self):
3160  """clear_caches(Cover self)"""
3161  return _IMP_core.Cover_clear_caches(self)
3162 
3163  def set_name(self, *args):
3164  """set_name(Cover self, std::string a0)"""
3165  return _IMP_core.Cover_set_name(self, *args)
3166 
3167  def set_check_level(self, *args):
3168  """set_check_level(Cover self, IMP::base::CheckLevel a0)"""
3169  return _IMP_core.Cover_set_check_level(self, *args)
3170 
3171  def add_to_derivative(self, *args):
3172  """add_to_derivative(Cover self, FloatKey a0, double a1, DerivativeAccumulator a2)"""
3173  return _IMP_core.Cover_add_to_derivative(self, *args)
3174 
3175  def set_is_optimized(self, *args):
3176  """set_is_optimized(Cover self, FloatKey a0, bool a1)"""
3177  return _IMP_core.Cover_set_is_optimized(self, *args)
3178 
3179  def get_is_optimized(self, *args):
3180  """get_is_optimized(Cover self, FloatKey a0) -> bool"""
3181  return _IMP_core.Cover_get_is_optimized(self, *args)
3182 
3183  def get_check_level(self):
3184  """get_check_level(Cover self) -> IMP::base::CheckLevel"""
3185  return _IMP_core.Cover_get_check_level(self)
3186 
3187  def __eq__(self, *args):
3188  """
3189  __eq__(Cover self, Cover o) -> bool
3190  __eq__(Cover self, Particle d) -> bool
3191  """
3192  return _IMP_core.Cover___eq__(self, *args)
3193 
3194  def __ne__(self, *args):
3195  """
3196  __ne__(Cover self, Cover o) -> bool
3197  __ne__(Cover self, Particle d) -> bool
3198  """
3199  return _IMP_core.Cover___ne__(self, *args)
3200 
3201  def __le__(self, *args):
3202  """
3203  __le__(Cover self, Cover o) -> bool
3204  __le__(Cover self, Particle d) -> bool
3205  """
3206  return _IMP_core.Cover___le__(self, *args)
3207 
3208  def __lt__(self, *args):
3209  """
3210  __lt__(Cover self, Cover o) -> bool
3211  __lt__(Cover self, Particle d) -> bool
3212  """
3213  return _IMP_core.Cover___lt__(self, *args)
3214 
3215  def __ge__(self, *args):
3216  """
3217  __ge__(Cover self, Cover o) -> bool
3218  __ge__(Cover self, Particle d) -> bool
3219  """
3220  return _IMP_core.Cover___ge__(self, *args)
3221 
3222  def __gt__(self, *args):
3223  """
3224  __gt__(Cover self, Cover o) -> bool
3225  __gt__(Cover self, Particle d) -> bool
3226  """
3227  return _IMP_core.Cover___gt__(self, *args)
3228 
3229  def __str__(self):
3230  """__str__(Cover self) -> std::string"""
3231  return _IMP_core.Cover___str__(self)
3232 
3233  def __repr__(self):
3234  """__repr__(Cover self) -> std::string"""
3235  return _IMP_core.Cover___repr__(self)
3236 
3237  __swig_destroy__ = _IMP_core.delete_Cover
3238  __del__ = lambda self : None;
3239 Cover_swigregister = _IMP_core.Cover_swigregister
3240 Cover_swigregister(Cover)
3241 
3242 def Cover_setup_particle(*args):
3243  """
3244  setup_particle(Model m, IMP::kernel::ParticleIndex pi, _ParticleIndexesAdaptor members) -> Cover
3245  setup_particle(_ParticleAdaptor decorator, _ParticleIndexesAdaptor members) -> Cover
3246  setup_particle(Model m, IMP::kernel::ParticleIndex pi, Refiner refiner) -> Cover
3247  Cover_setup_particle(_ParticleAdaptor decorator, Refiner refiner) -> Cover
3248  """
3249  return _IMP_core.Cover_setup_particle(*args)
3250 
3251 def Cover_get_is_setup(*args):
3252  """
3253  get_is_setup(_ParticleAdaptor p) -> bool
3254  Cover_get_is_setup(Model m, IMP::kernel::ParticleIndex pi) -> bool
3255  """
3256  return _IMP_core.Cover_get_is_setup(*args)
3257 
3258 class DerivativesFromRefined(IMP.kernel.SingletonModifier):
3259  """Proxy of C++ IMP::core::DerivativesFromRefined class"""
3260  __swig_setmethods__ = {}
3261  for _s in [IMP.kernel.SingletonModifier]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
3262  __setattr__ = lambda self, name, value: _swig_setattr(self, DerivativesFromRefined, name, value)
3263  __swig_getmethods__ = {}
3264  for _s in [IMP.kernel.SingletonModifier]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
3265  __getattr__ = lambda self, name: _swig_getattr(self, DerivativesFromRefined, name)
3266  def __init__(self, *args):
3267  """
3268  __init__(IMP::core::DerivativesFromRefined self, Refiner r, IMP::kernel::FloatKeys ks=IMP::core::XYZ::get_xyz_keys()) -> DerivativesFromRefined
3269  __init__(IMP::core::DerivativesFromRefined self, Refiner r) -> DerivativesFromRefined
3270  """
3271  this = _IMP_core.new_DerivativesFromRefined(*args)
3272  try: self.this.append(this)
3273  except: self.this = this
3274  def do_get_inputs(self, *args):
3275  """do_get_inputs(DerivativesFromRefined self, Model m, IMP::kernel::ParticleIndexes const & pis) -> IMP::kernel::ModelObjectsTemp"""
3276  return _IMP_core.DerivativesFromRefined_do_get_inputs(self, *args)
3277 
3278  def do_get_outputs(self, *args):
3279  """do_get_outputs(DerivativesFromRefined self, Model m, IMP::kernel::ParticleIndexes const & pis) -> IMP::kernel::ModelObjectsTemp"""
3280  return _IMP_core.DerivativesFromRefined_do_get_outputs(self, *args)
3281 
3282  def get_version_info(self):
3283  """get_version_info(DerivativesFromRefined self) -> VersionInfo"""
3284  return _IMP_core.DerivativesFromRefined_get_version_info(self)
3285 
3286  def __str__(self):
3287  """__str__(DerivativesFromRefined self) -> std::string"""
3288  return _IMP_core.DerivativesFromRefined___str__(self)
3289 
3290  def __repr__(self):
3291  """__repr__(DerivativesFromRefined self) -> std::string"""
3292  return _IMP_core.DerivativesFromRefined___repr__(self)
3293 
3294  def get_from(o):
3295  return _object_cast_to_DerivativesFromRefined(o)
3296  get_from = staticmethod(get_from)
3297 
3298 DerivativesFromRefined_swigregister = _IMP_core.DerivativesFromRefined_swigregister
3299 DerivativesFromRefined_swigregister(DerivativesFromRefined)
3300 
3301 class DerivativesToRefined(IMP.kernel.SingletonModifier):
3302  """Proxy of C++ IMP::core::DerivativesToRefined class"""
3303  __swig_setmethods__ = {}
3304  for _s in [IMP.kernel.SingletonModifier]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
3305  __setattr__ = lambda self, name, value: _swig_setattr(self, DerivativesToRefined, name, value)
3306  __swig_getmethods__ = {}
3307  for _s in [IMP.kernel.SingletonModifier]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
3308  __getattr__ = lambda self, name: _swig_getattr(self, DerivativesToRefined, name)
3309  def __init__(self, *args):
3310  """
3311  __init__(IMP::core::DerivativesToRefined self, Refiner r, IMP::kernel::FloatKeys ks=IMP::core::XYZ::get_xyz_keys()) -> DerivativesToRefined
3312  __init__(IMP::core::DerivativesToRefined self, Refiner r) -> DerivativesToRefined
3313  """
3314  this = _IMP_core.new_DerivativesToRefined(*args)
3315  try: self.this.append(this)
3316  except: self.this = this
3317  def do_get_inputs(self, *args):
3318  """do_get_inputs(DerivativesToRefined self, Model m, IMP::kernel::ParticleIndexes const & pis) -> IMP::kernel::ModelObjectsTemp"""
3319  return _IMP_core.DerivativesToRefined_do_get_inputs(self, *args)
3320 
3321  def do_get_outputs(self, *args):
3322  """do_get_outputs(DerivativesToRefined self, Model m, IMP::kernel::ParticleIndexes const & pis) -> IMP::kernel::ModelObjectsTemp"""
3323  return _IMP_core.DerivativesToRefined_do_get_outputs(self, *args)
3324 
3325  def get_version_info(self):
3326  """get_version_info(DerivativesToRefined self) -> VersionInfo"""
3327  return _IMP_core.DerivativesToRefined_get_version_info(self)
3328 
3329  def __str__(self):
3330  """__str__(DerivativesToRefined self) -> std::string"""
3331  return _IMP_core.DerivativesToRefined___str__(self)
3332 
3333  def __repr__(self):
3334  """__repr__(DerivativesToRefined self) -> std::string"""
3335  return _IMP_core.DerivativesToRefined___repr__(self)
3336 
3337  def get_from(o):
3338  return _object_cast_to_DerivativesToRefined(o)
3339  get_from = staticmethod(get_from)
3340 
3341 DerivativesToRefined_swigregister = _IMP_core.DerivativesToRefined_swigregister
3342 DerivativesToRefined_swigregister(DerivativesToRefined)
3343 
3344 class DiameterRestraint(IMP.kernel.Restraint):
3345  """Proxy of C++ IMP::core::DiameterRestraint class"""
3346  __swig_setmethods__ = {}
3347  for _s in [IMP.kernel.Restraint]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
3348  __setattr__ = lambda self, name, value: _swig_setattr(self, DiameterRestraint, name, value)
3349  __swig_getmethods__ = {}
3350  for _s in [IMP.kernel.Restraint]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
3351  __getattr__ = lambda self, name: _swig_getattr(self, DiameterRestraint, name)
3352  def __init__(self, *args):
3353  """__init__(IMP::core::DiameterRestraint self, UnaryFunction f, SingletonContainer sc, IMP::Float diameter) -> DiameterRestraint"""
3354  this = _IMP_core.new_DiameterRestraint(*args)
3355  try: self.this.append(this)
3356  except: self.this = this
3357  def do_get_inputs(self):
3358  """do_get_inputs(DiameterRestraint self) -> IMP::kernel::ModelObjectsTemp"""
3359  return _IMP_core.DiameterRestraint_do_get_inputs(self)
3360 
3361  def get_version_info(self):
3362  """get_version_info(DiameterRestraint self) -> VersionInfo"""
3363  return _IMP_core.DiameterRestraint_get_version_info(self)
3364 
3365  def do_create_decomposition(self):
3366  """do_create_decomposition(DiameterRestraint self) -> IMP::kernel::Restraints"""
3367  return _IMP_core.DiameterRestraint_do_create_decomposition(self)
3368 
3369  def do_create_current_decomposition(self):
3370  """do_create_current_decomposition(DiameterRestraint self) -> IMP::kernel::Restraints"""
3371  return _IMP_core.DiameterRestraint_do_create_current_decomposition(self)
3372 
3373  def __str__(self):
3374  """__str__(DiameterRestraint self) -> std::string"""
3375  return _IMP_core.DiameterRestraint___str__(self)
3376 
3377  def __repr__(self):
3378  """__repr__(DiameterRestraint self) -> std::string"""
3379  return _IMP_core.DiameterRestraint___repr__(self)
3380 
3381  def get_from(o):
3382  return _object_cast_to_DiameterRestraint(o)
3383  get_from = staticmethod(get_from)
3384 
3385 DiameterRestraint_swigregister = _IMP_core.DiameterRestraint_swigregister
3386 DiameterRestraint_swigregister(DiameterRestraint)
3387 
3388 class Transform(IMP.kernel.SingletonModifier):
3389  """Proxy of C++ IMP::core::Transform class"""
3390  __swig_setmethods__ = {}
3391  for _s in [IMP.kernel.SingletonModifier]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
3392  __setattr__ = lambda self, name, value: _swig_setattr(self, Transform, name, value)
3393  __swig_getmethods__ = {}
3394  for _s in [IMP.kernel.SingletonModifier]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
3395  __getattr__ = lambda self, name: _swig_getattr(self, Transform, name)
3396  def __init__(self, *args):
3397  """
3398  __init__(IMP::core::Transform self, Transformation3D t, bool ignore_non_xyz=False) -> Transform
3399  __init__(IMP::core::Transform self, Transformation3D t) -> Transform
3400  """
3401  this = _IMP_core.new_Transform(*args)
3402  try: self.this.append(this)
3403  except: self.this = this
3404  def do_get_inputs(self, *args):
3405  """do_get_inputs(Transform self, Model m, IMP::kernel::ParticleIndexes const & pis) -> IMP::kernel::ModelObjectsTemp"""
3406  return _IMP_core.Transform_do_get_inputs(self, *args)
3407 
3408  def do_get_outputs(self, *args):
3409  """do_get_outputs(Transform self, Model m, IMP::kernel::ParticleIndexes const & pis) -> IMP::kernel::ModelObjectsTemp"""
3410  return _IMP_core.Transform_do_get_outputs(self, *args)
3411 
3412  def get_version_info(self):
3413  """get_version_info(Transform self) -> VersionInfo"""
3414  return _IMP_core.Transform_get_version_info(self)
3415 
3416  def __str__(self):
3417  """__str__(Transform self) -> std::string"""
3418  return _IMP_core.Transform___str__(self)
3419 
3420  def __repr__(self):
3421  """__repr__(Transform self) -> std::string"""
3422  return _IMP_core.Transform___repr__(self)
3423 
3424  def get_from(o):
3425  return _object_cast_to_Transform(o)
3426  get_from = staticmethod(get_from)
3427 
3428 Transform_swigregister = _IMP_core.Transform_swigregister
3429 Transform_swigregister(Transform)
3430 
3431 class Reference(IMP.kernel.Decorator):
3432  """Proxy of C++ IMP::core::Reference class"""
3433  __swig_setmethods__ = {}
3434  for _s in [IMP.kernel.Decorator]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
3435  __setattr__ = lambda self, name, value: _swig_setattr(self, Reference, name, value)
3436  __swig_getmethods__ = {}
3437  for _s in [IMP.kernel.Decorator]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
3438  __getattr__ = lambda self, name: _swig_getattr(self, Reference, name)
3439  def __init__(self, *args):
3440  """
3441  __init__(IMP::core::Reference self) -> Reference
3442  __init__(IMP::core::Reference self, Model m, ::IMP::kernel::ParticleIndex id) -> Reference
3443  __init__(IMP::core::Reference self, _ParticleAdaptor d) -> Reference
3444  """
3445  this = _IMP_core.new_Reference(*args)
3446  try: self.this.append(this)
3447  except: self.this = this
3448  def show(self, *args):
3449  """
3450  show(Reference self, _ostream out=std::cout)
3451  show(Reference self)
3452  """
3453  return _IMP_core.Reference_show(self, *args)
3454 
3455  def setup_particle(*args):
3456  """
3457  setup_particle(Model m, IMP::kernel::ParticleIndex pi, _ParticleIndexAdaptor reference) -> Reference
3458  setup_particle(_ParticleAdaptor decorator, _ParticleIndexAdaptor reference) -> Reference
3459  """
3460  return _IMP_core.Reference_setup_particle(*args)
3461 
3462  if _newclass:setup_particle = staticmethod(setup_particle)
3463  __swig_getmethods__["setup_particle"] = lambda x: setup_particle
3464  def get_reference_particle(self):
3465  """get_reference_particle(Reference self) -> Particle"""
3466  return _IMP_core.Reference_get_reference_particle(self)
3467 
3468  def get_is_setup(*args):
3469  """
3470  get_is_setup(_ParticleAdaptor p) -> bool
3471  get_is_setup(Model m, IMP::kernel::ParticleIndex pi) -> bool
3472  """
3473  return _IMP_core.Reference_get_is_setup(*args)
3474 
3475  if _newclass:get_is_setup = staticmethod(get_is_setup)
3476  __swig_getmethods__["get_is_setup"] = lambda x: get_is_setup
3477  def get_reference_key():
3478  """get_reference_key() -> ParticleIndexKey"""
3479  return _IMP_core.Reference_get_reference_key()
3480 
3481  if _newclass:get_reference_key = staticmethod(get_reference_key)
3482  __swig_getmethods__["get_reference_key"] = lambda x: get_reference_key
3483  def add_attribute(self, *args):
3484  """
3485  add_attribute(Reference self, FloatKey k, IMP::Float v, bool opt)
3486  add_attribute(Reference self, FloatKey a0, IMP::Float a1)
3487  add_attribute(Reference self, IntKey a0, IMP::Int a1)
3488  add_attribute(Reference self, StringKey a0, IMP::String a1)
3489  add_attribute(Reference self, ParticleIndexKey a0, Particle a1)
3490  add_attribute(Reference self, ObjectKey a0, Object a1)
3491  """
3492  return _IMP_core.Reference_add_attribute(self, *args)
3493 
3494  def get_value(self, *args):
3495  """
3496  get_value(Reference self, FloatKey a0) -> IMP::Float
3497  get_value(Reference self, IntKey a0) -> IMP::Int
3498  get_value(Reference self, StringKey a0) -> IMP::String
3499  get_value(Reference self, ParticleIndexKey a0) -> Particle
3500  get_value(Reference self, ObjectKey a0) -> Object
3501  """
3502  return _IMP_core.Reference_get_value(self, *args)
3503 
3504  def set_value(self, *args):
3505  """
3506  set_value(Reference self, FloatKey a0, IMP::Float a1)
3507  set_value(Reference self, IntKey a0, IMP::Int a1)
3508  set_value(Reference self, StringKey a0, IMP::String a1)
3509  set_value(Reference self, ParticleIndexKey a0, Particle a1)
3510  set_value(Reference self, ObjectKey a0, Object a1)
3511  """
3512  return _IMP_core.Reference_set_value(self, *args)
3513 
3514  def remove_attribute(self, *args):
3515  """
3516  remove_attribute(Reference self, FloatKey a0)
3517  remove_attribute(Reference self, IntKey a0)
3518  remove_attribute(Reference self, StringKey a0)
3519  remove_attribute(Reference self, ParticleIndexKey a0)
3520  remove_attribute(Reference self, ObjectKey a0)
3521  """
3522  return _IMP_core.Reference_remove_attribute(self, *args)
3523 
3524  def has_attribute(self, *args):
3525  """
3526  has_attribute(Reference self, FloatKey a0) -> bool
3527  has_attribute(Reference self, IntKey a0) -> bool
3528  has_attribute(Reference self, StringKey a0) -> bool
3529  has_attribute(Reference self, ParticleIndexKey a0) -> bool
3530  has_attribute(Reference self, ObjectKey a0) -> bool
3531  """
3532  return _IMP_core.Reference_has_attribute(self, *args)
3533 
3534  def get_derivative(self, *args):
3535  """get_derivative(Reference self, FloatKey a0) -> double"""
3536  return _IMP_core.Reference_get_derivative(self, *args)
3537 
3538  def get_name(self):
3539  """get_name(Reference self) -> std::string"""
3540  return _IMP_core.Reference_get_name(self)
3541 
3542  def clear_caches(self):
3543  """clear_caches(Reference self)"""
3544  return _IMP_core.Reference_clear_caches(self)
3545 
3546  def set_name(self, *args):
3547  """set_name(Reference self, std::string a0)"""
3548  return _IMP_core.Reference_set_name(self, *args)
3549 
3550  def set_check_level(self, *args):
3551  """set_check_level(Reference self, IMP::base::CheckLevel a0)"""
3552  return _IMP_core.Reference_set_check_level(self, *args)
3553 
3554  def add_to_derivative(self, *args):
3555  """add_to_derivative(Reference self, FloatKey a0, double a1, DerivativeAccumulator a2)"""
3556  return _IMP_core.Reference_add_to_derivative(self, *args)
3557 
3558  def set_is_optimized(self, *args):
3559  """set_is_optimized(Reference self, FloatKey a0, bool a1)"""
3560  return _IMP_core.Reference_set_is_optimized(self, *args)
3561 
3562  def get_is_optimized(self, *args):
3563  """get_is_optimized(Reference self, FloatKey a0) -> bool"""
3564  return _IMP_core.Reference_get_is_optimized(self, *args)
3565 
3566  def get_check_level(self):
3567  """get_check_level(Reference self) -> IMP::base::CheckLevel"""
3568  return _IMP_core.Reference_get_check_level(self)
3569 
3570  def __eq__(self, *args):
3571  """
3572  __eq__(Reference self, Reference o) -> bool
3573  __eq__(Reference self, Particle d) -> bool
3574  """
3575  return _IMP_core.Reference___eq__(self, *args)
3576 
3577  def __ne__(self, *args):
3578  """
3579  __ne__(Reference self, Reference o) -> bool
3580  __ne__(Reference self, Particle d) -> bool
3581  """
3582  return _IMP_core.Reference___ne__(self, *args)
3583 
3584  def __le__(self, *args):
3585  """
3586  __le__(Reference self, Reference o) -> bool
3587  __le__(Reference self, Particle d) -> bool
3588  """
3589  return _IMP_core.Reference___le__(self, *args)
3590 
3591  def __lt__(self, *args):
3592  """
3593  __lt__(Reference self, Reference o) -> bool
3594  __lt__(Reference self, Particle d) -> bool
3595  """
3596  return _IMP_core.Reference___lt__(self, *args)
3597 
3598  def __ge__(self, *args):
3599  """
3600  __ge__(Reference self, Reference o) -> bool
3601  __ge__(Reference self, Particle d) -> bool
3602  """
3603  return _IMP_core.Reference___ge__(self, *args)
3604 
3605  def __gt__(self, *args):
3606  """
3607  __gt__(Reference self, Reference o) -> bool
3608  __gt__(Reference self, Particle d) -> bool
3609  """
3610  return _IMP_core.Reference___gt__(self, *args)
3611 
3612  def __str__(self):
3613  """__str__(Reference self) -> std::string"""
3614  return _IMP_core.Reference___str__(self)
3615 
3616  def __repr__(self):
3617  """__repr__(Reference self) -> std::string"""
3618  return _IMP_core.Reference___repr__(self)
3619 
3620  __swig_destroy__ = _IMP_core.delete_Reference
3621  __del__ = lambda self : None;
3622 Reference_swigregister = _IMP_core.Reference_swigregister
3623 Reference_swigregister(Reference)
3624 
3625 def Reference_setup_particle(*args):
3626  """
3627  setup_particle(Model m, IMP::kernel::ParticleIndex pi, _ParticleIndexAdaptor reference) -> Reference
3628  Reference_setup_particle(_ParticleAdaptor decorator, _ParticleIndexAdaptor reference) -> Reference
3629  """
3630  return _IMP_core.Reference_setup_particle(*args)
3631 
3632 def Reference_get_is_setup(*args):
3633  """
3634  get_is_setup(_ParticleAdaptor p) -> bool
3635  Reference_get_is_setup(Model m, IMP::kernel::ParticleIndex pi) -> bool
3636  """
3637  return _IMP_core.Reference_get_is_setup(*args)
3638 
3639 def Reference_get_reference_key():
3640  """Reference_get_reference_key() -> ParticleIndexKey"""
3641  return _IMP_core.Reference_get_reference_key()
3642 
3643 class TransformationAndReflectionSymmetry(IMP.kernel.SingletonModifier):
3644  """Proxy of C++ IMP::core::TransformationAndReflectionSymmetry class"""
3645  __swig_setmethods__ = {}
3646  for _s in [IMP.kernel.SingletonModifier]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
3647  __setattr__ = lambda self, name, value: _swig_setattr(self, TransformationAndReflectionSymmetry, name, value)
3648  __swig_getmethods__ = {}
3649  for _s in [IMP.kernel.SingletonModifier]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
3650  __getattr__ = lambda self, name: _swig_getattr(self, TransformationAndReflectionSymmetry, name)
3651  def __init__(self, *args):
3652  """__init__(IMP::core::TransformationAndReflectionSymmetry self, Transformation3D t, Reflection3D r) -> TransformationAndReflectionSymmetry"""
3653  this = _IMP_core.new_TransformationAndReflectionSymmetry(*args)
3654  try: self.this.append(this)
3655  except: self.this = this
3656  def do_get_inputs(self, *args):
3657  """do_get_inputs(TransformationAndReflectionSymmetry self, Model m, IMP::kernel::ParticleIndexes const & pis) -> IMP::kernel::ModelObjectsTemp"""
3658  return _IMP_core.TransformationAndReflectionSymmetry_do_get_inputs(self, *args)
3659 
3660  def do_get_outputs(self, *args):
3661  """do_get_outputs(TransformationAndReflectionSymmetry self, Model m, IMP::kernel::ParticleIndexes const & pis) -> IMP::kernel::ModelObjectsTemp"""
3662  return _IMP_core.TransformationAndReflectionSymmetry_do_get_outputs(self, *args)
3663 
3664  def get_version_info(self):
3665  """get_version_info(TransformationAndReflectionSymmetry self) -> VersionInfo"""
3666  return _IMP_core.TransformationAndReflectionSymmetry_get_version_info(self)
3667 
3668  def __str__(self):
3669  """__str__(TransformationAndReflectionSymmetry self) -> std::string"""
3670  return _IMP_core.TransformationAndReflectionSymmetry___str__(self)
3671 
3672  def __repr__(self):
3673  """__repr__(TransformationAndReflectionSymmetry self) -> std::string"""
3674  return _IMP_core.TransformationAndReflectionSymmetry___repr__(self)
3675 
3676  def get_from(o):
3677  return _object_cast_to_TransformationAndReflectionSymmetry(o)
3678  get_from = staticmethod(get_from)
3679 
3680 TransformationAndReflectionSymmetry_swigregister = _IMP_core.TransformationAndReflectionSymmetry_swigregister
3681 TransformationAndReflectionSymmetry_swigregister(TransformationAndReflectionSymmetry)
3682 
3683 class TransformationSymmetry(IMP.kernel.SingletonModifier):
3684  """Proxy of C++ IMP::core::TransformationSymmetry class"""
3685  __swig_setmethods__ = {}
3686  for _s in [IMP.kernel.SingletonModifier]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
3687  __setattr__ = lambda self, name, value: _swig_setattr(self, TransformationSymmetry, name, value)
3688  __swig_getmethods__ = {}
3689  for _s in [IMP.kernel.SingletonModifier]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
3690  __getattr__ = lambda self, name: _swig_getattr(self, TransformationSymmetry, name)
3691  def __init__(self, *args):
3692  """__init__(IMP::core::TransformationSymmetry self, Transformation3D t) -> TransformationSymmetry"""
3693  this = _IMP_core.new_TransformationSymmetry(*args)
3694  try: self.this.append(this)
3695  except: self.this = this
3696  def do_get_inputs(self, *args):
3697  """do_get_inputs(TransformationSymmetry self, Model m, IMP::kernel::ParticleIndexes const & pis) -> IMP::kernel::ModelObjectsTemp"""
3698  return _IMP_core.TransformationSymmetry_do_get_inputs(self, *args)
3699 
3700  def do_get_outputs(self, *args):
3701  """do_get_outputs(TransformationSymmetry self, Model m, IMP::kernel::ParticleIndexes const & pis) -> IMP::kernel::ModelObjectsTemp"""
3702  return _IMP_core.TransformationSymmetry_do_get_outputs(self, *args)
3703 
3704  def get_version_info(self):
3705  """get_version_info(TransformationSymmetry self) -> VersionInfo"""
3706  return _IMP_core.TransformationSymmetry_get_version_info(self)
3707 
3708  def __str__(self):
3709  """__str__(TransformationSymmetry self) -> std::string"""
3710  return _IMP_core.TransformationSymmetry___str__(self)
3711 
3712  def __repr__(self):
3713  """__repr__(TransformationSymmetry self) -> std::string"""
3714  return _IMP_core.TransformationSymmetry___repr__(self)
3715 
3716  def get_from(o):
3717  return _object_cast_to_TransformationSymmetry(o)
3718  get_from = staticmethod(get_from)
3719 
3720 TransformationSymmetry_swigregister = _IMP_core.TransformationSymmetry_swigregister
3721 TransformationSymmetry_swigregister(TransformationSymmetry)
3722 
3723 class DihedralRestraint(IMP.kernel.Restraint):
3724  """Proxy of C++ IMP::core::DihedralRestraint class"""
3725  __swig_setmethods__ = {}
3726  for _s in [IMP.kernel.Restraint]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
3727  __setattr__ = lambda self, name, value: _swig_setattr(self, DihedralRestraint, name, value)
3728  __swig_getmethods__ = {}
3729  for _s in [IMP.kernel.Restraint]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
3730  __getattr__ = lambda self, name: _swig_getattr(self, DihedralRestraint, name)
3731  def __init__(self, *args):
3732  """__init__(IMP::core::DihedralRestraint self, UnaryFunction score_func, Particle p1, Particle p2, Particle p3, Particle p4) -> DihedralRestraint"""
3733  this = _IMP_core.new_DihedralRestraint(*args)
3734  try: self.this.append(this)
3735  except: self.this = this
3736  def do_get_inputs(self):
3737  """do_get_inputs(DihedralRestraint self) -> IMP::kernel::ModelObjectsTemp"""
3738  return _IMP_core.DihedralRestraint_do_get_inputs(self)
3739 
3740  def get_version_info(self):
3741  """get_version_info(DihedralRestraint self) -> VersionInfo"""
3742  return _IMP_core.DihedralRestraint_get_version_info(self)
3743 
3744  def __str__(self):
3745  """__str__(DihedralRestraint self) -> std::string"""
3746  return _IMP_core.DihedralRestraint___str__(self)
3747 
3748  def __repr__(self):
3749  """__repr__(DihedralRestraint self) -> std::string"""
3750  return _IMP_core.DihedralRestraint___repr__(self)
3751 
3752  def get_from(o):
3753  return _object_cast_to_DihedralRestraint(o)
3754  get_from = staticmethod(get_from)
3755 
3756 DihedralRestraint_swigregister = _IMP_core.DihedralRestraint_swigregister
3757 DihedralRestraint_swigregister(DihedralRestraint)
3758 
3759 class DistancePairScore(IMP.kernel.PairScore):
3760  """Proxy of C++ IMP::core::DistancePairScore class"""
3761  __swig_setmethods__ = {}
3762  for _s in [IMP.kernel.PairScore]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
3763  __setattr__ = lambda self, name, value: _swig_setattr(self, DistancePairScore, name, value)
3764  __swig_getmethods__ = {}
3765  for _s in [IMP.kernel.PairScore]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
3766  __getattr__ = lambda self, name: _swig_getattr(self, DistancePairScore, name)
3767  def __init__(self, *args):
3768  """
3769  __init__(IMP::core::DistancePairScore self, UnaryFunction uf, std::string name="DistancePairScore%1%") -> DistancePairScore
3770  __init__(IMP::core::DistancePairScore self, UnaryFunction uf) -> DistancePairScore
3771  """
3772  this = _IMP_core.new_DistancePairScore(*args)
3773  try: self.this.append(this)
3774  except: self.this = this
3775  def do_get_inputs(self, *args):
3776  """do_get_inputs(DistancePairScore self, Model m, IMP::kernel::ParticleIndexes const & pis) -> IMP::kernel::ModelObjectsTemp"""
3777  return _IMP_core.DistancePairScore_do_get_inputs(self, *args)
3778 
3779  def get_version_info(self):
3780  """get_version_info(DistancePairScore self) -> VersionInfo"""
3781  return _IMP_core.DistancePairScore_get_version_info(self)
3782 
3783  def __str__(self):
3784  """__str__(DistancePairScore self) -> std::string"""
3785  return _IMP_core.DistancePairScore___str__(self)
3786 
3787  def __repr__(self):
3788  """__repr__(DistancePairScore self) -> std::string"""
3789  return _IMP_core.DistancePairScore___repr__(self)
3790 
3791  def get_from(o):
3792  return _object_cast_to_DistancePairScore(o)
3793  get_from = staticmethod(get_from)
3794 
3795 DistancePairScore_swigregister = _IMP_core.DistancePairScore_swigregister
3796 DistancePairScore_swigregister(DistancePairScore)
3797 
3798 class HarmonicDistancePairScore(IMP.kernel.PairScore):
3799  """Proxy of C++ IMP::core::HarmonicDistancePairScore class"""
3800  __swig_setmethods__ = {}
3801  for _s in [IMP.kernel.PairScore]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
3802  __setattr__ = lambda self, name, value: _swig_setattr(self, HarmonicDistancePairScore, name, value)
3803  __swig_getmethods__ = {}
3804  for _s in [IMP.kernel.PairScore]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
3805  __getattr__ = lambda self, name: _swig_getattr(self, HarmonicDistancePairScore, name)
3806  def __init__(self, *args):
3807  """
3808  __init__(IMP::core::HarmonicDistancePairScore self, double x0, double k, std::string name="HarmonicDistancePairScore%1%") -> HarmonicDistancePairScore
3809  __init__(IMP::core::HarmonicDistancePairScore self, double x0, double k) -> HarmonicDistancePairScore
3810  """
3811  this = _IMP_core.new_HarmonicDistancePairScore(*args)
3812  try: self.this.append(this)
3813  except: self.this = this
3814  def do_get_inputs(self, *args):
3815  """do_get_inputs(HarmonicDistancePairScore self, Model m, IMP::kernel::ParticleIndexes const & pis) -> IMP::kernel::ModelObjectsTemp"""
3816  return _IMP_core.HarmonicDistancePairScore_do_get_inputs(self, *args)
3817 
3818  def get_version_info(self):
3819  """get_version_info(HarmonicDistancePairScore self) -> VersionInfo"""
3820  return _IMP_core.HarmonicDistancePairScore_get_version_info(self)
3821 
3822  def __str__(self):
3823  """__str__(HarmonicDistancePairScore self) -> std::string"""
3824  return _IMP_core.HarmonicDistancePairScore___str__(self)
3825 
3826  def __repr__(self):
3827  """__repr__(HarmonicDistancePairScore self) -> std::string"""
3828  return _IMP_core.HarmonicDistancePairScore___repr__(self)
3829 
3830  def get_from(o):
3831  return _object_cast_to_HarmonicDistancePairScore(o)
3832  get_from = staticmethod(get_from)
3833 
3834 HarmonicDistancePairScore_swigregister = _IMP_core.HarmonicDistancePairScore_swigregister
3835 HarmonicDistancePairScore_swigregister(HarmonicDistancePairScore)
3836 
3837 class DistanceRestraint(IMP.kernel.Restraint):
3838  """Proxy of C++ IMP::core::DistanceRestraint class"""
3839  __swig_setmethods__ = {}
3840  for _s in [IMP.kernel.Restraint]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
3841  __setattr__ = lambda self, name, value: _swig_setattr(self, DistanceRestraint, name, value)
3842  __swig_getmethods__ = {}
3843  for _s in [IMP.kernel.Restraint]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
3844  __getattr__ = lambda self, name: _swig_getattr(self, DistanceRestraint, name)
3845  def __init__(self, *args):
3846  """
3847  __init__(IMP::core::DistanceRestraint self, UnaryFunction score_func, Particle a, Particle b, std::string name="DistanceRestraint %1%") -> DistanceRestraint
3848  __init__(IMP::core::DistanceRestraint self, UnaryFunction score_func, Particle a, Particle b) -> DistanceRestraint
3849  """
3850  this = _IMP_core.new_DistanceRestraint(*args)
3851  try: self.this.append(this)
3852  except: self.this = this
3853  def get_version_info(self):
3854  """get_version_info(DistanceRestraint self) -> VersionInfo"""
3855  return _IMP_core.DistanceRestraint_get_version_info(self)
3856 
3857  def __str__(self):
3858  """__str__(DistanceRestraint self) -> std::string"""
3859  return _IMP_core.DistanceRestraint___str__(self)
3860 
3861  def __repr__(self):
3862  """__repr__(DistanceRestraint self) -> std::string"""
3863  return _IMP_core.DistanceRestraint___repr__(self)
3864 
3865  def get_from(o):
3866  return _object_cast_to_DistanceRestraint(o)
3867  get_from = staticmethod(get_from)
3868 
3869 DistanceRestraint_swigregister = _IMP_core.DistanceRestraint_swigregister
3870 DistanceRestraint_swigregister(DistanceRestraint)
3871 
3872 class SphereDistanceToSingletonScore(IMP.kernel.SingletonScore):
3873  """Proxy of C++ IMP::core::SphereDistanceToSingletonScore class"""
3874  __swig_setmethods__ = {}
3875  for _s in [IMP.kernel.SingletonScore]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
3876  __setattr__ = lambda self, name, value: _swig_setattr(self, SphereDistanceToSingletonScore, name, value)
3877  __swig_getmethods__ = {}
3878  for _s in [IMP.kernel.SingletonScore]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
3879  __getattr__ = lambda self, name: _swig_getattr(self, SphereDistanceToSingletonScore, name)
3880  def __init__(self, *args):
3881  """__init__(IMP::core::SphereDistanceToSingletonScore self, UnaryFunction f, Vector3D pt) -> SphereDistanceToSingletonScore"""
3882  this = _IMP_core.new_SphereDistanceToSingletonScore(*args)
3883  try: self.this.append(this)
3884  except: self.this = this
3885  def do_get_inputs(self, *args):
3886  """do_get_inputs(SphereDistanceToSingletonScore self, Model m, IMP::kernel::ParticleIndexes const & pis) -> IMP::kernel::ModelObjectsTemp"""
3887  return _IMP_core.SphereDistanceToSingletonScore_do_get_inputs(self, *args)
3888 
3889  def get_version_info(self):
3890  """get_version_info(SphereDistanceToSingletonScore self) -> VersionInfo"""
3891  return _IMP_core.SphereDistanceToSingletonScore_get_version_info(self)
3892 
3893  def __str__(self):
3894  """__str__(SphereDistanceToSingletonScore self) -> std::string"""
3895  return _IMP_core.SphereDistanceToSingletonScore___str__(self)
3896 
3897  def __repr__(self):
3898  """__repr__(SphereDistanceToSingletonScore self) -> std::string"""
3899  return _IMP_core.SphereDistanceToSingletonScore___repr__(self)
3900 
3901  def get_from(o):
3902  return _object_cast_to_SphereDistanceToSingletonScore(o)
3903  get_from = staticmethod(get_from)
3904 
3905 SphereDistanceToSingletonScore_swigregister = _IMP_core.SphereDistanceToSingletonScore_swigregister
3906 SphereDistanceToSingletonScore_swigregister(SphereDistanceToSingletonScore)
3907 
3908 class ExcludedVolumeRestraint(IMP.kernel.Restraint):
3909  """Proxy of C++ IMP::core::ExcludedVolumeRestraint class"""
3910  __swig_setmethods__ = {}
3911  for _s in [IMP.kernel.Restraint]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
3912  __setattr__ = lambda self, name, value: _swig_setattr(self, ExcludedVolumeRestraint, name, value)
3913  __swig_getmethods__ = {}
3914  for _s in [IMP.kernel.Restraint]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
3915  __getattr__ = lambda self, name: _swig_getattr(self, ExcludedVolumeRestraint, name)
3916  def __init__(self, *args):
3917  """
3918  __init__(IMP::core::ExcludedVolumeRestraint self, _SingletonContainerAdaptor sc, double k=1, double slack=10, std::string name="ExcludedVolumeRestraint%1%") -> ExcludedVolumeRestraint
3919  __init__(IMP::core::ExcludedVolumeRestraint self, _SingletonContainerAdaptor sc, double k=1, double slack=10) -> ExcludedVolumeRestraint
3920  __init__(IMP::core::ExcludedVolumeRestraint self, _SingletonContainerAdaptor sc, double k=1) -> ExcludedVolumeRestraint
3921  __init__(IMP::core::ExcludedVolumeRestraint self, _SingletonContainerAdaptor sc) -> ExcludedVolumeRestraint
3922  """
3923  this = _IMP_core.new_ExcludedVolumeRestraint(*args)
3924  try: self.this.append(this)
3925  except: self.this = this
3926  def do_get_inputs(self):
3927  """do_get_inputs(ExcludedVolumeRestraint self) -> IMP::kernel::ModelObjectsTemp"""
3928  return _IMP_core.ExcludedVolumeRestraint_do_get_inputs(self)
3929 
3930  def get_version_info(self):
3931  """get_version_info(ExcludedVolumeRestraint self) -> VersionInfo"""
3932  return _IMP_core.ExcludedVolumeRestraint_get_version_info(self)
3933 
3934  def do_create_decomposition(self):
3935  """do_create_decomposition(ExcludedVolumeRestraint self) -> IMP::kernel::Restraints"""
3936  return _IMP_core.ExcludedVolumeRestraint_do_create_decomposition(self)
3937 
3938  def do_create_current_decomposition(self):
3939  """do_create_current_decomposition(ExcludedVolumeRestraint self) -> IMP::kernel::Restraints"""
3940  return _IMP_core.ExcludedVolumeRestraint_do_create_current_decomposition(self)
3941 
3942  def get_indexes(self):
3943  """get_indexes(ExcludedVolumeRestraint self) -> IMP::kernel::ParticleIndexPairs const &"""
3944  return _IMP_core.ExcludedVolumeRestraint_get_indexes(self)
3945 
3946  def remove_pair_filter(self, *args):
3947  """remove_pair_filter(ExcludedVolumeRestraint self, PairPredicate d)"""
3948  return _IMP_core.ExcludedVolumeRestraint_remove_pair_filter(self, *args)
3949 
3950  def remove_pair_filters(self, *args):
3951  """remove_pair_filters(ExcludedVolumeRestraint self, IMP::kernel::PairPredicates const & d)"""
3952  return _IMP_core.ExcludedVolumeRestraint_remove_pair_filters(self, *args)
3953 
3954  def set_pair_filters(self, *args):
3955  """set_pair_filters(ExcludedVolumeRestraint self, IMP::kernel::PairPredicates const & ps)"""
3956  return _IMP_core.ExcludedVolumeRestraint_set_pair_filters(self, *args)
3957 
3958  def set_pair_filters_order(self, *args):
3959  """set_pair_filters_order(ExcludedVolumeRestraint self, IMP::kernel::PairPredicates const & objs)"""
3960  return _IMP_core.ExcludedVolumeRestraint_set_pair_filters_order(self, *args)
3961 
3962  def add_pair_filter(self, *args):
3963  """add_pair_filter(ExcludedVolumeRestraint self, PairPredicate obj) -> unsigned int"""
3964  return _IMP_core.ExcludedVolumeRestraint_add_pair_filter(self, *args)
3965 
3966  def add_pair_filters(self, *args):
3967  """add_pair_filters(ExcludedVolumeRestraint self, IMP::kernel::PairPredicates const & objs)"""
3968  return _IMP_core.ExcludedVolumeRestraint_add_pair_filters(self, *args)
3969 
3970  def clear_pair_filters(self):
3971  """clear_pair_filters(ExcludedVolumeRestraint self)"""
3972  return _IMP_core.ExcludedVolumeRestraint_clear_pair_filters(self)
3973 
3974  def get_number_of_pair_filters(self):
3975  """get_number_of_pair_filters(ExcludedVolumeRestraint self) -> unsigned int"""
3976  return _IMP_core.ExcludedVolumeRestraint_get_number_of_pair_filters(self)
3977 
3978  def get_has_pair_filters(self):
3979  """get_has_pair_filters(ExcludedVolumeRestraint self) -> bool"""
3980  return _IMP_core.ExcludedVolumeRestraint_get_has_pair_filters(self)
3981 
3982  def get_pair_filter(self, *args):
3983  """get_pair_filter(ExcludedVolumeRestraint self, unsigned int i) -> PairPredicate"""
3984  return _IMP_core.ExcludedVolumeRestraint_get_pair_filter(self, *args)
3985 
3986  def get_pair_filters(self):
3987  """get_pair_filters(ExcludedVolumeRestraint self) -> IMP::kernel::PairPredicates"""
3988  return _IMP_core.ExcludedVolumeRestraint_get_pair_filters(self)
3989 
3990  def reserve_pair_filters(self, *args):
3991  """reserve_pair_filters(ExcludedVolumeRestraint self, unsigned int sz)"""
3992  return _IMP_core.ExcludedVolumeRestraint_reserve_pair_filters(self, *args)
3993 
3994  def __str__(self):
3995  """__str__(ExcludedVolumeRestraint self) -> std::string"""
3996  return _IMP_core.ExcludedVolumeRestraint___str__(self)
3997 
3998  def __repr__(self):
3999  """__repr__(ExcludedVolumeRestraint self) -> std::string"""
4000  return _IMP_core.ExcludedVolumeRestraint___repr__(self)
4001 
4002  def get_from(o):
4003  return _object_cast_to_ExcludedVolumeRestraint(o)
4004  get_from = staticmethod(get_from)
4005 
4006 ExcludedVolumeRestraint_swigregister = _IMP_core.ExcludedVolumeRestraint_swigregister
4007 ExcludedVolumeRestraint_swigregister(ExcludedVolumeRestraint)
4008 
4009 class FixedRefiner(IMP.kernel.Refiner):
4010  """Proxy of C++ IMP::core::FixedRefiner class"""
4011  __swig_setmethods__ = {}
4012  for _s in [IMP.kernel.Refiner]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
4013  __setattr__ = lambda self, name, value: _swig_setattr(self, FixedRefiner, name, value)
4014  __swig_getmethods__ = {}
4015  for _s in [IMP.kernel.Refiner]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
4016  __getattr__ = lambda self, name: _swig_getattr(self, FixedRefiner, name)
4017  def __init__(self, *args):
4018  """
4019  __init__(IMP::core::FixedRefiner self, IMP::kernel::ParticlesTemp const & ps) -> FixedRefiner
4020  __init__(IMP::core::FixedRefiner self, Model m, IMP::kernel::ParticleIndexes const & pis) -> FixedRefiner
4021  """
4022  this = _IMP_core.new_FixedRefiner(*args)
4023  try: self.this.append(this)
4024  except: self.this = this
4025  def do_get_inputs(self, *args):
4026  """do_get_inputs(FixedRefiner self, Model m, IMP::kernel::ParticleIndexes const & pis) -> IMP::kernel::ModelObjectsTemp"""
4027  return _IMP_core.FixedRefiner_do_get_inputs(self, *args)
4028 
4029  def get_version_info(self):
4030  """get_version_info(FixedRefiner self) -> VersionInfo"""
4031  return _IMP_core.FixedRefiner_get_version_info(self)
4032 
4033  def __str__(self):
4034  """__str__(FixedRefiner self) -> std::string"""
4035  return _IMP_core.FixedRefiner___str__(self)
4036 
4037  def __repr__(self):
4038  """__repr__(FixedRefiner self) -> std::string"""
4039  return _IMP_core.FixedRefiner___repr__(self)
4040 
4041  def get_from(o):
4042  return _object_cast_to_FixedRefiner(o)
4043  get_from = staticmethod(get_from)
4044 
4045 FixedRefiner_swigregister = _IMP_core.FixedRefiner_swigregister
4046 FixedRefiner_swigregister(FixedRefiner)
4047 
4048 class GridClosePairsFinder(ClosePairsFinder):
4049  """Proxy of C++ IMP::core::GridClosePairsFinder class"""
4050  __swig_setmethods__ = {}
4051  for _s in [ClosePairsFinder]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
4052  __setattr__ = lambda self, name, value: _swig_setattr(self, GridClosePairsFinder, name, value)
4053  __swig_getmethods__ = {}
4054  for _s in [ClosePairsFinder]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
4055  __getattr__ = lambda self, name: _swig_getattr(self, GridClosePairsFinder, name)
4056  def __init__(self):
4057  """__init__(IMP::core::GridClosePairsFinder self) -> GridClosePairsFinder"""
4058  this = _IMP_core.new_GridClosePairsFinder()
4059  try: self.this.append(this)
4060  except: self.this = this
4061  def get_close_pairs(self, *args):
4062  """
4063  get_close_pairs(GridClosePairsFinder self, IMP::kernel::ParticlesTemp const & pc) -> IMP::kernel::ParticlePairsTemp
4064  get_close_pairs(GridClosePairsFinder self, IMP::kernel::ParticlesTemp const & pca, IMP::kernel::ParticlesTemp const & pcb) -> IMP::kernel::ParticlePairsTemp
4065  get_close_pairs(GridClosePairsFinder self, IMP::algebra::BoundingBox3Ds const & bbs) -> IMP::IntPairs
4066  get_close_pairs(GridClosePairsFinder self, IMP::algebra::BoundingBox3Ds const & bas, IMP::algebra::BoundingBox3Ds const & bbs) -> IMP::IntPairs
4067  get_close_pairs(GridClosePairsFinder self, Model m, IMP::kernel::ParticleIndexes const & pc) -> IMP::kernel::ParticleIndexPairs
4068  get_close_pairs(GridClosePairsFinder self, Model m, IMP::kernel::ParticleIndexes const & pca, IMP::kernel::ParticleIndexes const & pcb) -> IMP::kernel::ParticleIndexPairs
4069  """
4070  return _IMP_core.GridClosePairsFinder_get_close_pairs(self, *args)
4071 
4072  def do_get_inputs(self, *args):
4073  """do_get_inputs(GridClosePairsFinder self, Model m, IMP::kernel::ParticleIndexes const & pis) -> IMP::kernel::ModelObjectsTemp"""
4074  return _IMP_core.GridClosePairsFinder_do_get_inputs(self, *args)
4075 
4076  def get_version_info(self):
4077  """get_version_info(GridClosePairsFinder self) -> VersionInfo"""
4078  return _IMP_core.GridClosePairsFinder_get_version_info(self)
4079 
4080  def __str__(self):
4081  """__str__(GridClosePairsFinder self) -> std::string"""
4082  return _IMP_core.GridClosePairsFinder___str__(self)
4083 
4084  def __repr__(self):
4085  """__repr__(GridClosePairsFinder self) -> std::string"""
4086  return _IMP_core.GridClosePairsFinder___repr__(self)
4087 
4088  def get_from(o):
4089  return _object_cast_to_GridClosePairsFinder(o)
4090  get_from = staticmethod(get_from)
4091 
4092 GridClosePairsFinder_swigregister = _IMP_core.GridClosePairsFinder_swigregister
4093 GridClosePairsFinder_swigregister(GridClosePairsFinder)
4094 
4095 class Harmonic(IMP.kernel.UnaryFunction):
4096  """Proxy of C++ IMP::core::Harmonic class"""
4097  __swig_setmethods__ = {}
4098  for _s in [IMP.kernel.UnaryFunction]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
4099  __setattr__ = lambda self, name, value: _swig_setattr(self, Harmonic, name, value)
4100  __swig_getmethods__ = {}
4101  for _s in [IMP.kernel.UnaryFunction]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
4102  __getattr__ = lambda self, name: _swig_getattr(self, Harmonic, name)
4103  def __init__(self, *args):
4104  """__init__(IMP::core::Harmonic self, IMP::Float mean, IMP::Float k) -> Harmonic"""
4105  this = _IMP_core.new_Harmonic(*args)
4106  try: self.this.append(this)
4107  except: self.this = this
4108  def get_version_info(self):
4109  """get_version_info(Harmonic self) -> VersionInfo"""
4110  return _IMP_core.Harmonic_get_version_info(self)
4111 
4112  def get_mean(self):
4113  """get_mean(Harmonic self) -> IMP::Float"""
4114  return _IMP_core.Harmonic_get_mean(self)
4115 
4116  def get_k(self):
4117  """get_k(Harmonic self) -> IMP::Float"""
4118  return _IMP_core.Harmonic_get_k(self)
4119 
4120  def set_mean(self, *args):
4121  """set_mean(Harmonic self, IMP::Float mean)"""
4122  return _IMP_core.Harmonic_set_mean(self, *args)
4123 
4124  def set_k(self, *args):
4125  """set_k(Harmonic self, IMP::Float k)"""
4126  return _IMP_core.Harmonic_set_k(self, *args)
4127 
4128  def get_k_from_standard_deviation(*args):
4129  """
4130  get_k_from_standard_deviation(IMP::Float sd, IMP::Float t=297.15) -> IMP::Float
4131  get_k_from_standard_deviation(IMP::Float sd) -> IMP::Float
4132  """
4133  return _IMP_core.Harmonic_get_k_from_standard_deviation(*args)
4134 
4135  if _newclass:get_k_from_standard_deviation = staticmethod(get_k_from_standard_deviation)
4136  __swig_getmethods__["get_k_from_standard_deviation"] = lambda x: get_k_from_standard_deviation
4137  def __str__(self):
4138  """__str__(Harmonic self) -> std::string"""
4139  return _IMP_core.Harmonic___str__(self)
4140 
4141  def __repr__(self):
4142  """__repr__(Harmonic self) -> std::string"""
4143  return _IMP_core.Harmonic___repr__(self)
4144 
4145  def get_from(o):
4146  return _object_cast_to_Harmonic(o)
4147  get_from = staticmethod(get_from)
4148 
4149 Harmonic_swigregister = _IMP_core.Harmonic_swigregister
4150 Harmonic_swigregister(Harmonic)
4151 
4152 def Harmonic_get_k_from_standard_deviation(*args):
4153  """
4154  get_k_from_standard_deviation(IMP::Float sd, IMP::Float t=297.15) -> IMP::Float
4155  Harmonic_get_k_from_standard_deviation(IMP::Float sd) -> IMP::Float
4156  """
4157  return _IMP_core.Harmonic_get_k_from_standard_deviation(*args)
4158 
4159 class HarmonicWell(IMP.kernel.UnaryFunction):
4160  """Proxy of C++ IMP::core::HarmonicWell class"""
4161  __swig_setmethods__ = {}
4162  for _s in [IMP.kernel.UnaryFunction]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
4163  __setattr__ = lambda self, name, value: _swig_setattr(self, HarmonicWell, name, value)
4164  __swig_getmethods__ = {}
4165  for _s in [IMP.kernel.UnaryFunction]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
4166  __getattr__ = lambda self, name: _swig_getattr(self, HarmonicWell, name)
4167  def __init__(self, *args):
4168  """__init__(IMP::core::HarmonicWell self, IMP::FloatRange const & well, double k) -> HarmonicWell"""
4169  this = _IMP_core.new_HarmonicWell(*args)
4170  try: self.this.append(this)
4171  except: self.this = this
4172  def get_version_info(self):
4173  """get_version_info(HarmonicWell self) -> VersionInfo"""
4174  return _IMP_core.HarmonicWell_get_version_info(self)
4175 
4176  def __str__(self):
4177  """__str__(HarmonicWell self) -> std::string"""
4178  return _IMP_core.HarmonicWell___str__(self)
4179 
4180  def __repr__(self):
4181  """__repr__(HarmonicWell self) -> std::string"""
4182  return _IMP_core.HarmonicWell___repr__(self)
4183 
4184  def get_from(o):
4185  return _object_cast_to_HarmonicWell(o)
4186  get_from = staticmethod(get_from)
4187 
4188 HarmonicWell_swigregister = _IMP_core.HarmonicWell_swigregister
4189 HarmonicWell_swigregister(HarmonicWell)
4190 
4191 class HarmonicLowerBound(Harmonic):
4192  """Proxy of C++ IMP::core::HarmonicLowerBound class"""
4193  __swig_setmethods__ = {}
4194  for _s in [Harmonic]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
4195  __setattr__ = lambda self, name, value: _swig_setattr(self, HarmonicLowerBound, name, value)
4196  __swig_getmethods__ = {}
4197  for _s in [Harmonic]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
4198  __getattr__ = lambda self, name: _swig_getattr(self, HarmonicLowerBound, name)
4199  def __init__(self, *args):
4200  """__init__(IMP::core::HarmonicLowerBound self, IMP::Float mean, IMP::Float k) -> HarmonicLowerBound"""
4201  this = _IMP_core.new_HarmonicLowerBound(*args)
4202  try: self.this.append(this)
4203  except: self.this = this
4204  def __str__(self):
4205  """__str__(HarmonicLowerBound self) -> std::string"""
4206  return _IMP_core.HarmonicLowerBound___str__(self)
4207 
4208  def __repr__(self):
4209  """__repr__(HarmonicLowerBound self) -> std::string"""
4210  return _IMP_core.HarmonicLowerBound___repr__(self)
4211 
4212  def get_from(o):
4213  return _object_cast_to_HarmonicLowerBound(o)
4214  get_from = staticmethod(get_from)
4215 
4216 HarmonicLowerBound_swigregister = _IMP_core.HarmonicLowerBound_swigregister
4217 HarmonicLowerBound_swigregister(HarmonicLowerBound)
4218 
4219 class HarmonicUpperBound(Harmonic):
4220  """Proxy of C++ IMP::core::HarmonicUpperBound class"""
4221  __swig_setmethods__ = {}
4222  for _s in [Harmonic]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
4223  __setattr__ = lambda self, name, value: _swig_setattr(self, HarmonicUpperBound, name, value)
4224  __swig_getmethods__ = {}
4225  for _s in [Harmonic]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
4226  __getattr__ = lambda self, name: _swig_getattr(self, HarmonicUpperBound, name)
4227  def __init__(self, *args):
4228  """__init__(IMP::core::HarmonicUpperBound self, IMP::Float mean, IMP::Float k) -> HarmonicUpperBound"""
4229  this = _IMP_core.new_HarmonicUpperBound(*args)
4230  try: self.this.append(this)
4231  except: self.this = this
4232  def __str__(self):
4233  """__str__(HarmonicUpperBound self) -> std::string"""
4234  return _IMP_core.HarmonicUpperBound___str__(self)
4235 
4236  def __repr__(self):
4237  """__repr__(HarmonicUpperBound self) -> std::string"""
4238  return _IMP_core.HarmonicUpperBound___repr__(self)
4239 
4240  def get_from(o):
4241  return _object_cast_to_HarmonicUpperBound(o)
4242  get_from = staticmethod(get_from)
4243 
4244 HarmonicUpperBound_swigregister = _IMP_core.HarmonicUpperBound_swigregister
4245 HarmonicUpperBound_swigregister(HarmonicUpperBound)
4246 
4247 class MSConnectivityRestraint(IMP.kernel.Restraint):
4248  """Proxy of C++ IMP::core::MSConnectivityRestraint class"""
4249  __swig_setmethods__ = {}
4250  for _s in [IMP.kernel.Restraint]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
4251  __setattr__ = lambda self, name, value: _swig_setattr(self, MSConnectivityRestraint, name, value)
4252  __swig_getmethods__ = {}
4253  for _s in [IMP.kernel.Restraint]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
4254  __getattr__ = lambda self, name: _swig_getattr(self, MSConnectivityRestraint, name)
4255  def __init__(self, *args):
4256  """
4257  __init__(IMP::core::MSConnectivityRestraint self, Model m, PairScore ps, double eps=0.1) -> MSConnectivityRestraint
4258  __init__(IMP::core::MSConnectivityRestraint self, Model m, PairScore ps) -> MSConnectivityRestraint
4259  """
4260  this = _IMP_core.new_MSConnectivityRestraint(*args)
4261  try: self.this.append(this)
4262  except: self.this = this
4263  def add_type(self, *args):
4264  """add_type(MSConnectivityRestraint self, IMP::kernel::ParticlesTemp const & ps) -> unsigned int"""
4265  return _IMP_core.MSConnectivityRestraint_add_type(self, *args)
4266 
4267  def add_composite(self, *args):
4268  """
4269  add_composite(MSConnectivityRestraint self, IMP::Ints const & components) -> unsigned int
4270  add_composite(MSConnectivityRestraint self, IMP::Ints const & components, unsigned int parent) -> unsigned int
4271  """
4272  return _IMP_core.MSConnectivityRestraint_add_composite(self, *args)
4273 
4274  def get_connected_pairs(self):
4275  """get_connected_pairs(MSConnectivityRestraint self) -> IMP::kernel::ParticlePairsTemp"""
4276  return _IMP_core.MSConnectivityRestraint_get_connected_pairs(self)
4277 
4278  def get_pair_score(self):
4279  """get_pair_score(MSConnectivityRestraint self) -> PairScore"""
4280  return _IMP_core.MSConnectivityRestraint_get_pair_score(self)
4281 
4282  def do_create_current_decomposition(self):
4283  """do_create_current_decomposition(MSConnectivityRestraint self) -> IMP::kernel::Restraints"""
4284  return _IMP_core.MSConnectivityRestraint_do_create_current_decomposition(self)
4285 
4286  def do_get_inputs(self):
4287  """do_get_inputs(MSConnectivityRestraint self) -> IMP::kernel::ModelObjectsTemp"""
4288  return _IMP_core.MSConnectivityRestraint_do_get_inputs(self)
4289 
4290  def get_version_info(self):
4291  """get_version_info(MSConnectivityRestraint self) -> VersionInfo"""
4292  return _IMP_core.MSConnectivityRestraint_get_version_info(self)
4293 
4294  def __str__(self):
4295  """__str__(MSConnectivityRestraint self) -> std::string"""
4296  return _IMP_core.MSConnectivityRestraint___str__(self)
4297 
4298  def __repr__(self):
4299  """__repr__(MSConnectivityRestraint self) -> std::string"""
4300  return _IMP_core.MSConnectivityRestraint___repr__(self)
4301 
4302  def get_from(o):
4303  return _object_cast_to_MSConnectivityRestraint(o)
4304  get_from = staticmethod(get_from)
4305 
4306 MSConnectivityRestraint_swigregister = _IMP_core.MSConnectivityRestraint_swigregister
4307 MSConnectivityRestraint_swigregister(MSConnectivityRestraint)
4308 
4309 class HierarchyTraits(_object):
4310  """Proxy of C++ IMP::core::HierarchyTraits class"""
4311  __swig_setmethods__ = {}
4312  __setattr__ = lambda self, name, value: _swig_setattr(self, HierarchyTraits, name, value)
4313  __swig_getmethods__ = {}
4314  __getattr__ = lambda self, name: _swig_getattr(self, HierarchyTraits, name)
4315  def __init__(self, *args):
4316  """
4317  __init__(IMP::core::HierarchyTraits self) -> HierarchyTraits
4318  __init__(IMP::core::HierarchyTraits self, std::string name) -> HierarchyTraits
4319  """
4320  this = _IMP_core.new_HierarchyTraits(*args)
4321  try: self.this.append(this)
4322  except: self.this = this
4323  def get_children_key(self):
4324  """get_children_key(HierarchyTraits self) -> ParticleIndexesKey"""
4325  return _IMP_core.HierarchyTraits_get_children_key(self)
4326 
4327  def get_parent_key(self):
4328  """get_parent_key(HierarchyTraits self) -> ParticleIndexKey"""
4329  return _IMP_core.HierarchyTraits_get_parent_key(self)
4330 
4331  def __eq__(self, *args):
4332  """__eq__(HierarchyTraits self, HierarchyTraits o) -> bool"""
4333  return _IMP_core.HierarchyTraits___eq__(self, *args)
4334 
4335  def show(self, *args):
4336  """
4337  show(HierarchyTraits self, _ostream out=std::cout)
4338  show(HierarchyTraits self)
4339  """
4340  return _IMP_core.HierarchyTraits_show(self, *args)
4341 
4342  def __str__(self):
4343  """__str__(HierarchyTraits self) -> std::string"""
4344  return _IMP_core.HierarchyTraits___str__(self)
4345 
4346  def __repr__(self):
4347  """__repr__(HierarchyTraits self) -> std::string"""
4348  return _IMP_core.HierarchyTraits___repr__(self)
4349 
4350  __swig_destroy__ = _IMP_core.delete_HierarchyTraits
4351  __del__ = lambda self : None;
4352 HierarchyTraits_swigregister = _IMP_core.HierarchyTraits_swigregister
4353 HierarchyTraits_swigregister(HierarchyTraits)
4354 
4355 class Hierarchy(IMP.kernel.Decorator):
4356  """Proxy of C++ IMP::core::Hierarchy class"""
4357  __swig_setmethods__ = {}
4358  for _s in [IMP.kernel.Decorator]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
4359  __setattr__ = lambda self, name, value: _swig_setattr(self, Hierarchy, name, value)
4360  __swig_getmethods__ = {}
4361  for _s in [IMP.kernel.Decorator]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
4362  __getattr__ = lambda self, name: _swig_getattr(self, Hierarchy, name)
4363  def get_decorator_traits(self):
4364  """get_decorator_traits(Hierarchy self) -> HierarchyTraits"""
4365  return _IMP_core.Hierarchy_get_decorator_traits(self)
4366 
4367  def get_default_decorator_traits():
4368  """get_default_decorator_traits() -> HierarchyTraits"""
4369  return _IMP_core.Hierarchy_get_default_decorator_traits()
4370 
4371  if _newclass:get_default_decorator_traits = staticmethod(get_default_decorator_traits)
4372  __swig_getmethods__["get_default_decorator_traits"] = lambda x: get_default_decorator_traits
4373  def __init__(self, *args):
4374  """
4375  __init__(IMP::core::Hierarchy self) -> Hierarchy
4376  __init__(IMP::core::Hierarchy self, Model m, ::IMP::kernel::ParticleIndex id, HierarchyTraits tr=get_default_traits()) -> Hierarchy
4377  __init__(IMP::core::Hierarchy self, Model m, ::IMP::kernel::ParticleIndex id) -> Hierarchy
4378  __init__(IMP::core::Hierarchy self, _ParticleAdaptor d, HierarchyTraits tr=get_default_traits()) -> Hierarchy
4379  __init__(IMP::core::Hierarchy self, _ParticleAdaptor d) -> Hierarchy
4380  """
4381  this = _IMP_core.new_Hierarchy(*args)
4382  try: self.this.append(this)
4383  except: self.this = this
4384  def show(self, *args):
4385  """
4386  show(Hierarchy self, _ostream out=std::cout)
4387  show(Hierarchy self)
4388  """
4389  return _IMP_core.Hierarchy_show(self, *args)
4390 
4391  def setup_particle(*args):
4392  """
4393  setup_particle(Model m, IMP::kernel::ParticleIndex pi, HierarchyTraits tr=IMP::core::Hierarchy::get_default_decorator_traits()) -> Hierarchy
4394  setup_particle(Model m, IMP::kernel::ParticleIndex pi) -> Hierarchy
4395  setup_particle(_ParticleAdaptor d, HierarchyTraits tr=IMP::core::Hierarchy::get_default_decorator_traits()) -> Hierarchy
4396  setup_particle(_ParticleAdaptor d) -> Hierarchy
4397  setup_particle(Model m, IMP::kernel::ParticleIndex pi, IMP::kernel::ParticleIndexes children, HierarchyTraits tr=IMP::core::Hierarchy::get_default_decorator_traits()) -> Hierarchy
4398  setup_particle(Model m, IMP::kernel::ParticleIndex pi, IMP::kernel::ParticleIndexes children) -> Hierarchy
4399  setup_particle(_ParticleAdaptor d, IMP::kernel::ParticleIndexes children, HierarchyTraits tr=IMP::core::Hierarchy::get_default_decorator_traits()) -> Hierarchy
4400  setup_particle(_ParticleAdaptor d, IMP::kernel::ParticleIndexes children) -> Hierarchy
4401  setup_particle(Model m, IMP::kernel::ParticleIndex pi, IMP::kernel::ParticlesTemp children, HierarchyTraits tr=IMP::core::Hierarchy::get_default_decorator_traits()) -> Hierarchy
4402  setup_particle(Model m, IMP::kernel::ParticleIndex pi, IMP::kernel::ParticlesTemp children) -> Hierarchy
4403  setup_particle(_ParticleAdaptor d, IMP::kernel::ParticlesTemp children, HierarchyTraits tr=IMP::core::Hierarchy::get_default_decorator_traits()) -> Hierarchy
4404  setup_particle(_ParticleAdaptor d, IMP::kernel::ParticlesTemp children) -> Hierarchy
4405  """
4406  return _IMP_core.Hierarchy_setup_particle(*args)
4407 
4408  if _newclass:setup_particle = staticmethod(setup_particle)
4409  __swig_getmethods__["setup_particle"] = lambda x: setup_particle
4410  def get_is_setup(*args):
4411  """
4412  get_is_setup(_ParticleAdaptor p, HierarchyTraits tr=get_default_traits()) -> bool
4413  get_is_setup(_ParticleAdaptor p) -> bool
4414  get_is_setup(Model arg1, IMP::kernel::ParticleIndex arg2, HierarchyTraits arg3=Hierarchy::get_default_traits()) -> bool
4415  get_is_setup(Model arg1, IMP::kernel::ParticleIndex arg2) -> bool
4416  """
4417  return _IMP_core.Hierarchy_get_is_setup(*args)
4418 
4419  if _newclass:get_is_setup = staticmethod(get_is_setup)
4420  __swig_getmethods__["get_is_setup"] = lambda x: get_is_setup
4421  def get_parent(self):
4422  """get_parent(Hierarchy self) -> Hierarchy"""
4423  return _IMP_core.Hierarchy_get_parent(self)
4424 
4425  def get_number_of_children(self):
4426  """get_number_of_children(Hierarchy self) -> unsigned int"""
4427  return _IMP_core.Hierarchy_get_number_of_children(self)
4428 
4429  def get_child(self, *args):
4430  """get_child(Hierarchy self, unsigned int i) -> Hierarchy"""
4431  return _IMP_core.Hierarchy_get_child(self, *args)
4432 
4433  def get_children_indexes(self):
4434  """get_children_indexes(Hierarchy self) -> IMP::kernel::ParticleIndexes"""
4435  return _IMP_core.Hierarchy_get_children_indexes(self)
4436 
4437  def get_children(self):
4438  """get_children(Hierarchy self) -> IMP::core::GenericHierarchies"""
4439  return _IMP_core.Hierarchy_get_children(self)
4440 
4441  def remove_child(self, *args):
4442  """
4443  remove_child(Hierarchy self, unsigned int i)
4444  remove_child(Hierarchy self, Hierarchy h)
4445  """
4446  return _IMP_core.Hierarchy_remove_child(self, *args)
4447 
4448  def clear_children(self):
4449  """clear_children(Hierarchy self)"""
4450  return _IMP_core.Hierarchy_clear_children(self)
4451 
4452  def add_child(self, *args):
4453  """add_child(Hierarchy self, Hierarchy h)"""
4454  return _IMP_core.Hierarchy_add_child(self, *args)
4455 
4456  def add_child_at(self, *args):
4457  """add_child_at(Hierarchy self, Hierarchy h, unsigned int pos)"""
4458  return _IMP_core.Hierarchy_add_child_at(self, *args)
4459 
4460  def get_child_index(self, *args):
4461  """
4462  get_child_index(Hierarchy self, unsigned int i) -> IMP::kernel::ParticleIndex
4463  get_child_index(Hierarchy self) -> int
4464  """
4465  return _IMP_core.Hierarchy_get_child_index(self, *args)
4466 
4467  def get_default_traits():
4468  """get_default_traits() -> HierarchyTraits"""
4469  return _IMP_core.Hierarchy_get_default_traits()
4470 
4471  if _newclass:get_default_traits = staticmethod(get_default_traits)
4472  __swig_getmethods__["get_default_traits"] = lambda x: get_default_traits
4473  def get_traits(self):
4474  """get_traits(Hierarchy self) -> HierarchyTraits"""
4475  return _IMP_core.Hierarchy_get_traits(self)
4476 
4477  def add_attribute(self, *args):
4478  """
4479  add_attribute(Hierarchy self, FloatKey k, IMP::Float v, bool opt)
4480  add_attribute(Hierarchy self, FloatKey a0, IMP::Float a1)
4481  add_attribute(Hierarchy self, IntKey a0, IMP::Int a1)
4482  add_attribute(Hierarchy self, StringKey a0, IMP::String a1)
4483  add_attribute(Hierarchy self, ParticleIndexKey a0, Particle a1)
4484  add_attribute(Hierarchy self, ObjectKey a0, Object a1)
4485  """
4486  return _IMP_core.Hierarchy_add_attribute(self, *args)
4487 
4488  def get_value(self, *args):
4489  """
4490  get_value(Hierarchy self, FloatKey a0) -> IMP::Float
4491  get_value(Hierarchy self, IntKey a0) -> IMP::Int
4492  get_value(Hierarchy self, StringKey a0) -> IMP::String
4493  get_value(Hierarchy self, ParticleIndexKey a0) -> Particle
4494  get_value(Hierarchy self, ObjectKey a0) -> Object
4495  """
4496  return _IMP_core.Hierarchy_get_value(self, *args)
4497 
4498  def set_value(self, *args):
4499  """
4500  set_value(Hierarchy self, FloatKey a0, IMP::Float a1)
4501  set_value(Hierarchy self, IntKey a0, IMP::Int a1)
4502  set_value(Hierarchy self, StringKey a0, IMP::String a1)
4503  set_value(Hierarchy self, ParticleIndexKey a0, Particle a1)
4504  set_value(Hierarchy self, ObjectKey a0, Object a1)
4505  """
4506  return _IMP_core.Hierarchy_set_value(self, *args)
4507 
4508  def remove_attribute(self, *args):
4509  """
4510  remove_attribute(Hierarchy self, FloatKey a0)
4511  remove_attribute(Hierarchy self, IntKey a0)
4512  remove_attribute(Hierarchy self, StringKey a0)
4513  remove_attribute(Hierarchy self, ParticleIndexKey a0)
4514  remove_attribute(Hierarchy self, ObjectKey a0)
4515  """
4516  return _IMP_core.Hierarchy_remove_attribute(self, *args)
4517 
4518  def has_attribute(self, *args):
4519  """
4520  has_attribute(Hierarchy self, FloatKey a0) -> bool
4521  has_attribute(Hierarchy self, IntKey a0) -> bool
4522  has_attribute(Hierarchy self, StringKey a0) -> bool
4523  has_attribute(Hierarchy self, ParticleIndexKey a0) -> bool
4524  has_attribute(Hierarchy self, ObjectKey a0) -> bool
4525  """
4526  return _IMP_core.Hierarchy_has_attribute(self, *args)
4527 
4528  def get_derivative(self, *args):
4529  """get_derivative(Hierarchy self, FloatKey a0) -> double"""
4530  return _IMP_core.Hierarchy_get_derivative(self, *args)
4531 
4532  def get_name(self):
4533  """get_name(Hierarchy self) -> std::string"""
4534  return _IMP_core.Hierarchy_get_name(self)
4535 
4536  def clear_caches(self):
4537  """clear_caches(Hierarchy self)"""
4538  return _IMP_core.Hierarchy_clear_caches(self)
4539 
4540  def set_name(self, *args):
4541  """set_name(Hierarchy self, std::string a0)"""
4542  return _IMP_core.Hierarchy_set_name(self, *args)
4543 
4544  def set_check_level(self, *args):
4545  """set_check_level(Hierarchy self, IMP::base::CheckLevel a0)"""
4546  return _IMP_core.Hierarchy_set_check_level(self, *args)
4547 
4548  def add_to_derivative(self, *args):
4549  """add_to_derivative(Hierarchy self, FloatKey a0, double a1, DerivativeAccumulator a2)"""
4550  return _IMP_core.Hierarchy_add_to_derivative(self, *args)
4551 
4552  def set_is_optimized(self, *args):
4553  """set_is_optimized(Hierarchy self, FloatKey a0, bool a1)"""
4554  return _IMP_core.Hierarchy_set_is_optimized(self, *args)
4555 
4556  def get_is_optimized(self, *args):
4557  """get_is_optimized(Hierarchy self, FloatKey a0) -> bool"""
4558  return _IMP_core.Hierarchy_get_is_optimized(self, *args)
4559 
4560  def get_check_level(self):
4561  """get_check_level(Hierarchy self) -> IMP::base::CheckLevel"""
4562  return _IMP_core.Hierarchy_get_check_level(self)
4563 
4564  def __eq__(self, *args):
4565  """
4566  __eq__(Hierarchy self, Hierarchy o) -> bool
4567  __eq__(Hierarchy self, Particle d) -> bool
4568  """
4569  return _IMP_core.Hierarchy___eq__(self, *args)
4570 
4571  def __ne__(self, *args):
4572  """
4573  __ne__(Hierarchy self, Hierarchy o) -> bool
4574  __ne__(Hierarchy self, Particle d) -> bool
4575  """
4576  return _IMP_core.Hierarchy___ne__(self, *args)
4577 
4578  def __le__(self, *args):
4579  """
4580  __le__(Hierarchy self, Hierarchy o) -> bool
4581  __le__(Hierarchy self, Particle d) -> bool
4582  """
4583  return _IMP_core.Hierarchy___le__(self, *args)
4584 
4585  def __lt__(self, *args):
4586  """
4587  __lt__(Hierarchy self, Hierarchy o) -> bool
4588  __lt__(Hierarchy self, Particle d) -> bool
4589  """
4590  return _IMP_core.Hierarchy___lt__(self, *args)
4591 
4592  def __ge__(self, *args):
4593  """
4594  __ge__(Hierarchy self, Hierarchy o) -> bool
4595  __ge__(Hierarchy self, Particle d) -> bool
4596  """
4597  return _IMP_core.Hierarchy___ge__(self, *args)
4598 
4599  def __gt__(self, *args):
4600  """
4601  __gt__(Hierarchy self, Hierarchy o) -> bool
4602  __gt__(Hierarchy self, Particle d) -> bool
4603  """
4604  return _IMP_core.Hierarchy___gt__(self, *args)
4605 
4606  def __str__(self):
4607  """__str__(Hierarchy self) -> std::string"""
4608  return _IMP_core.Hierarchy___str__(self)
4609 
4610  def __repr__(self):
4611  """__repr__(Hierarchy self) -> std::string"""
4612  return _IMP_core.Hierarchy___repr__(self)
4613 
4614  __swig_destroy__ = _IMP_core.delete_Hierarchy
4615  __del__ = lambda self : None;
4616 Hierarchy_swigregister = _IMP_core.Hierarchy_swigregister
4617 Hierarchy_swigregister(Hierarchy)
4618 
4619 def Hierarchy_get_default_decorator_traits():
4620  """Hierarchy_get_default_decorator_traits() -> HierarchyTraits"""
4621  return _IMP_core.Hierarchy_get_default_decorator_traits()
4622 
4623 def Hierarchy_setup_particle(*args):
4624  """
4625  setup_particle(Model m, IMP::kernel::ParticleIndex pi, HierarchyTraits tr=IMP::core::Hierarchy::get_default_decorator_traits()) -> Hierarchy
4626  setup_particle(Model m, IMP::kernel::ParticleIndex pi) -> Hierarchy
4627  setup_particle(_ParticleAdaptor d, HierarchyTraits tr=IMP::core::Hierarchy::get_default_decorator_traits()) -> Hierarchy
4628  setup_particle(_ParticleAdaptor d) -> Hierarchy
4629  setup_particle(Model m, IMP::kernel::ParticleIndex pi, IMP::kernel::ParticleIndexes children, HierarchyTraits tr=IMP::core::Hierarchy::get_default_decorator_traits()) -> Hierarchy
4630  setup_particle(Model m, IMP::kernel::ParticleIndex pi, IMP::kernel::ParticleIndexes children) -> Hierarchy
4631  setup_particle(_ParticleAdaptor d, IMP::kernel::ParticleIndexes children, HierarchyTraits tr=IMP::core::Hierarchy::get_default_decorator_traits()) -> Hierarchy
4632  setup_particle(_ParticleAdaptor d, IMP::kernel::ParticleIndexes children) -> Hierarchy
4633  setup_particle(Model m, IMP::kernel::ParticleIndex pi, IMP::kernel::ParticlesTemp children, HierarchyTraits tr=IMP::core::Hierarchy::get_default_decorator_traits()) -> Hierarchy
4634  setup_particle(Model m, IMP::kernel::ParticleIndex pi, IMP::kernel::ParticlesTemp children) -> Hierarchy
4635  setup_particle(_ParticleAdaptor d, IMP::kernel::ParticlesTemp children, HierarchyTraits tr=IMP::core::Hierarchy::get_default_decorator_traits()) -> Hierarchy
4636  Hierarchy_setup_particle(_ParticleAdaptor d, IMP::kernel::ParticlesTemp children) -> Hierarchy
4637  """
4638  return _IMP_core.Hierarchy_setup_particle(*args)
4639 
4640 def Hierarchy_get_is_setup(*args):
4641  """
4642  get_is_setup(_ParticleAdaptor p, HierarchyTraits tr=get_default_traits()) -> bool
4643  get_is_setup(_ParticleAdaptor p) -> bool
4644  get_is_setup(Model arg1, IMP::kernel::ParticleIndex arg2, HierarchyTraits arg3=Hierarchy::get_default_traits()) -> bool
4645  Hierarchy_get_is_setup(Model arg1, IMP::kernel::ParticleIndex arg2) -> bool
4646  """
4647  return _IMP_core.Hierarchy_get_is_setup(*args)
4648 
4649 def Hierarchy_get_default_traits():
4650  """Hierarchy_get_default_traits() -> HierarchyTraits"""
4651  return _IMP_core.Hierarchy_get_default_traits()
4652 
4653 class HierarchyVisitor(_object):
4654  """Proxy of C++ IMP::core::HierarchyVisitor class"""
4655  __swig_setmethods__ = {}
4656  __setattr__ = lambda self, name, value: _swig_setattr(self, HierarchyVisitor, name, value)
4657  __swig_getmethods__ = {}
4658  __getattr__ = lambda self, name: _swig_getattr(self, HierarchyVisitor, name)
4659  def __init__(self, *args, **kwargs): raise AttributeError("No constructor defined - class is abstract")
4660  __repr__ = _swig_repr
4661  def __call__(self, *args):
4662  """__call__(HierarchyVisitor self, Hierarchy p) -> bool"""
4663  return _IMP_core.HierarchyVisitor___call__(self, *args)
4664 
4665  __swig_destroy__ = _IMP_core.delete_HierarchyVisitor
4666  __del__ = lambda self : None;
4667 HierarchyVisitor_swigregister = _IMP_core.HierarchyVisitor_swigregister
4668 HierarchyVisitor_swigregister(HierarchyVisitor)
4669 
4670 class ModifierVisitor(HierarchyVisitor):
4671  """Proxy of C++ IMP::core::ModifierVisitor class"""
4672  __swig_setmethods__ = {}
4673  for _s in [HierarchyVisitor]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
4674  __setattr__ = lambda self, name, value: _swig_setattr(self, ModifierVisitor, name, value)
4675  __swig_getmethods__ = {}
4676  for _s in [HierarchyVisitor]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
4677  __getattr__ = lambda self, name: _swig_getattr(self, ModifierVisitor, name)
4678  __repr__ = _swig_repr
4679  def __init__(self, *args):
4680  """__init__(IMP::core::ModifierVisitor self, SingletonModifier sm) -> ModifierVisitor"""
4681  this = _IMP_core.new_ModifierVisitor(*args)
4682  try: self.this.append(this)
4683  except: self.this = this
4684  __swig_destroy__ = _IMP_core.delete_ModifierVisitor
4685  __del__ = lambda self : None;
4686 ModifierVisitor_swigregister = _IMP_core.ModifierVisitor_swigregister
4687 ModifierVisitor_swigregister(ModifierVisitor)
4688 
4689 class HierarchyCounter(HierarchyVisitor):
4690  """Proxy of C++ IMP::core::HierarchyCounter class"""
4691  __swig_setmethods__ = {}
4692  for _s in [HierarchyVisitor]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
4693  __setattr__ = lambda self, name, value: _swig_setattr(self, HierarchyCounter, name, value)
4694  __swig_getmethods__ = {}
4695  for _s in [HierarchyVisitor]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
4696  __getattr__ = lambda self, name: _swig_getattr(self, HierarchyCounter, name)
4697  def __init__(self):
4698  """__init__(IMP::core::HierarchyCounter self) -> HierarchyCounter"""
4699  this = _IMP_core.new_HierarchyCounter()
4700  try: self.this.append(this)
4701  except: self.this = this
4702  def get_count(self):
4703  """get_count(HierarchyCounter self) -> unsigned int"""
4704  return _IMP_core.HierarchyCounter_get_count(self)
4705 
4706  def show(self, *args):
4707  """
4708  show(HierarchyCounter self, _ostream out=std::cout)
4709  show(HierarchyCounter self)
4710  """
4711  return _IMP_core.HierarchyCounter_show(self, *args)
4712 
4713  def __str__(self):
4714  """__str__(HierarchyCounter self) -> std::string"""
4715  return _IMP_core.HierarchyCounter___str__(self)
4716 
4717  def __repr__(self):
4718  """__repr__(HierarchyCounter self) -> std::string"""
4719  return _IMP_core.HierarchyCounter___repr__(self)
4720 
4721  __swig_destroy__ = _IMP_core.delete_HierarchyCounter
4722  __del__ = lambda self : None;
4723 HierarchyCounter_swigregister = _IMP_core.HierarchyCounter_swigregister
4724 HierarchyCounter_swigregister(HierarchyCounter)
4725 
4726 
4727 def get_leaves(*args):
4728  """get_leaves(Hierarchy mhd) -> IMP::core::GenericHierarchies"""
4729  return _IMP_core.get_leaves(*args)
4730 
4731 def get_internal(*args):
4732  """get_internal(Hierarchy mhd) -> IMP::core::GenericHierarchies"""
4733  return _IMP_core.get_internal(*args)
4734 
4735 def get_all_descendants(*args):
4736  """get_all_descendants(Hierarchy mhd) -> IMP::core::GenericHierarchies"""
4737  return _IMP_core.get_all_descendants(*args)
4738 
4739 def get_root(*args):
4740  """get_root(Hierarchy h) -> Hierarchy"""
4741  return _IMP_core.get_root(*args)
4742 
4743 def visit_breadth_first(*args):
4744  """visit_breadth_first(Hierarchy d, HierarchyVisitor f)"""
4745  return _IMP_core.visit_breadth_first(*args)
4746 
4747 def visit_depth_first(*args):
4748  """visit_depth_first(Hierarchy d, HierarchyVisitor f)"""
4749  return _IMP_core.visit_depth_first(*args)
4750 class LeavesRefiner(IMP.kernel.Refiner):
4751  """Proxy of C++ IMP::core::LeavesRefiner class"""
4752  __swig_setmethods__ = {}
4753  for _s in [IMP.kernel.Refiner]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
4754  __setattr__ = lambda self, name, value: _swig_setattr(self, LeavesRefiner, name, value)
4755  __swig_getmethods__ = {}
4756  for _s in [IMP.kernel.Refiner]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
4757  __getattr__ = lambda self, name: _swig_getattr(self, LeavesRefiner, name)
4758  def __init__(self, *args):
4759  """__init__(IMP::core::LeavesRefiner self, HierarchyTraits tr) -> LeavesRefiner"""
4760  this = _IMP_core.new_LeavesRefiner(*args)
4761  try: self.this.append(this)
4762  except: self.this = this
4763  def do_get_inputs(self, *args):
4764  """do_get_inputs(LeavesRefiner self, Model m, IMP::kernel::ParticleIndexes const & pis) -> IMP::kernel::ModelObjectsTemp"""
4765  return _IMP_core.LeavesRefiner_do_get_inputs(self, *args)
4766 
4767  def get_version_info(self):
4768  """get_version_info(LeavesRefiner self) -> VersionInfo"""
4769  return _IMP_core.LeavesRefiner_get_version_info(self)
4770 
4771  def __str__(self):
4772  """__str__(LeavesRefiner self) -> std::string"""
4773  return _IMP_core.LeavesRefiner___str__(self)
4774 
4775  def __repr__(self):
4776  """__repr__(LeavesRefiner self) -> std::string"""
4777  return _IMP_core.LeavesRefiner___repr__(self)
4778 
4779  def get_from(o):
4780  return _object_cast_to_LeavesRefiner(o)
4781  get_from = staticmethod(get_from)
4782 
4783 LeavesRefiner_swigregister = _IMP_core.LeavesRefiner_swigregister
4784 LeavesRefiner_swigregister(LeavesRefiner)
4785 
4786 class Linear(IMP.kernel.UnaryFunction):
4787  """Proxy of C++ IMP::core::Linear class"""
4788  __swig_setmethods__ = {}
4789  for _s in [IMP.kernel.UnaryFunction]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
4790  __setattr__ = lambda self, name, value: _swig_setattr(self, Linear, name, value)
4791  __swig_getmethods__ = {}
4792  for _s in [IMP.kernel.UnaryFunction]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
4793  __getattr__ = lambda self, name: _swig_getattr(self, Linear, name)
4794  def __init__(self, *args):
4795  """__init__(IMP::core::Linear self, double offset, double slope) -> Linear"""
4796  this = _IMP_core.new_Linear(*args)
4797  try: self.this.append(this)
4798  except: self.this = this
4799  def set_slope(self, *args):
4800  """set_slope(Linear self, double f)"""
4801  return _IMP_core.Linear_set_slope(self, *args)
4802 
4803  def set_offset(self, *args):
4804  """set_offset(Linear self, double f)"""
4805  return _IMP_core.Linear_set_offset(self, *args)
4806 
4807  def get_version_info(self):
4808  """get_version_info(Linear self) -> VersionInfo"""
4809  return _IMP_core.Linear_get_version_info(self)
4810 
4811  def __str__(self):
4812  """__str__(Linear self) -> std::string"""
4813  return _IMP_core.Linear___str__(self)
4814 
4815  def __repr__(self):
4816  """__repr__(Linear self) -> std::string"""
4817  return _IMP_core.Linear___repr__(self)
4818 
4819  def get_from(o):
4820  return _object_cast_to_Linear(o)
4821  get_from = staticmethod(get_from)
4822 
4823 Linear_swigregister = _IMP_core.Linear_swigregister
4824 Linear_swigregister(Linear)
4825 
4826 class IncrementalScoringFunction(IMP.kernel.ScoringFunction):
4827  """Proxy of C++ IMP::core::IncrementalScoringFunction class"""
4828  __swig_setmethods__ = {}
4829  for _s in [IMP.kernel.ScoringFunction]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
4830  __setattr__ = lambda self, name, value: _swig_setattr(self, IncrementalScoringFunction, name, value)
4831  __swig_getmethods__ = {}
4832  for _s in [IMP.kernel.ScoringFunction]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
4833  __getattr__ = lambda self, name: _swig_getattr(self, IncrementalScoringFunction, name)
4834  def __init__(self, *args):
4835  """
4836  __init__(IMP::core::IncrementalScoringFunction self, IMP::kernel::ParticlesTemp const & to_move, IMP::kernel::RestraintsTemp const & rs,
4837  double weight=1.0, double max=NO_MAX, std::string name="IncrementalScoringFunction%1%") -> IncrementalScoringFunction
4838  __init__(IMP::core::IncrementalScoringFunction self, IMP::kernel::ParticlesTemp const & to_move, IMP::kernel::RestraintsTemp const & rs,
4839  double weight=1.0, double max=NO_MAX) -> IncrementalScoringFunction
4840  __init__(IMP::core::IncrementalScoringFunction self, IMP::kernel::ParticlesTemp const & to_move, IMP::kernel::RestraintsTemp const & rs,
4841  double weight=1.0) -> IncrementalScoringFunction
4842  __init__(IMP::core::IncrementalScoringFunction self, IMP::kernel::ParticlesTemp const & to_move, IMP::kernel::RestraintsTemp const & rs) -> IncrementalScoringFunction
4843  """
4844  this = _IMP_core.new_IncrementalScoringFunction(*args)
4845  try: self.this.append(this)
4846  except: self.this = this
4847  def reset_moved_particles(self):
4848  """reset_moved_particles(IncrementalScoringFunction self)"""
4849  return _IMP_core.IncrementalScoringFunction_reset_moved_particles(self)
4850 
4851  def set_moved_particles(self, *args):
4852  """set_moved_particles(IncrementalScoringFunction self, IMP::kernel::ParticleIndexes const & p)"""
4853  return _IMP_core.IncrementalScoringFunction_set_moved_particles(self, *args)
4854 
4855  def add_close_pair_score(self, *args):
4856  """
4857  add_close_pair_score(IncrementalScoringFunction self, PairScore ps, double distance, IMP::kernel::ParticlesTemp const & particles, IMP::kernel::PairPredicates const & filters)
4858  add_close_pair_score(IncrementalScoringFunction self, PairScore ps, double distance, IMP::kernel::ParticlesTemp const & particles)
4859  """
4860  return _IMP_core.IncrementalScoringFunction_add_close_pair_score(self, *args)
4861 
4862  def clear_close_pair_scores(self):
4863  """clear_close_pair_scores(IncrementalScoringFunction self)"""
4864  return _IMP_core.IncrementalScoringFunction_clear_close_pair_scores(self)
4865 
4866  def get_movable_indexes(self):
4867  """get_movable_indexes(IncrementalScoringFunction self) -> IMP::kernel::ParticleIndexes"""
4868  return _IMP_core.IncrementalScoringFunction_get_movable_indexes(self)
4869 
4870  def do_add_score_and_derivatives(self, *args):
4871  """do_add_score_and_derivatives(IncrementalScoringFunction self, ScoreAccumulator sa, IMP::kernel::ScoreStatesTemp const & ss)"""
4872  return _IMP_core.IncrementalScoringFunction_do_add_score_and_derivatives(self, *args)
4873 
4874  def do_get_inputs(self):
4875  """do_get_inputs(IncrementalScoringFunction self) -> IMP::kernel::ModelObjectsTemp"""
4876  return _IMP_core.IncrementalScoringFunction_do_get_inputs(self)
4877 
4878  def handle_set_has_required_score_states(self, *args):
4879  """handle_set_has_required_score_states(IncrementalScoringFunction self, bool arg2)"""
4880  return _IMP_core.IncrementalScoringFunction_handle_set_has_required_score_states(self, *args)
4881 
4882  def get_version_info(self):
4883  """get_version_info(IncrementalScoringFunction self) -> VersionInfo"""
4884  return _IMP_core.IncrementalScoringFunction_get_version_info(self)
4885 
4886  def __str__(self):
4887  """__str__(IncrementalScoringFunction self) -> std::string"""
4888  return _IMP_core.IncrementalScoringFunction___str__(self)
4889 
4890  def __repr__(self):
4891  """__repr__(IncrementalScoringFunction self) -> std::string"""
4892  return _IMP_core.IncrementalScoringFunction___repr__(self)
4893 
4894  def get_from(o):
4895  return _object_cast_to_IncrementalScoringFunction(o)
4896  get_from = staticmethod(get_from)
4897 
4898 IncrementalScoringFunction_swigregister = _IMP_core.IncrementalScoringFunction_swigregister
4899 IncrementalScoringFunction_swigregister(IncrementalScoringFunction)
4900 
4901 IMP_CORE_HAS_MONTE_CARLO_MOVER = _IMP_core.IMP_CORE_HAS_MONTE_CARLO_MOVER
4902 class MonteCarlo(IMP.kernel.Optimizer):
4903  """Proxy of C++ IMP::core::MonteCarlo class"""
4904  __swig_setmethods__ = {}
4905  for _s in [IMP.kernel.Optimizer]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
4906  __setattr__ = lambda self, name, value: _swig_setattr(self, MonteCarlo, name, value)
4907  __swig_getmethods__ = {}
4908  for _s in [IMP.kernel.Optimizer]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
4909  __getattr__ = lambda self, name: _swig_getattr(self, MonteCarlo, name)
4910  def __init__(self, *args):
4911  """__init__(IMP::core::MonteCarlo self, Model m) -> MonteCarlo"""
4912  this = _IMP_core.new_MonteCarlo(*args)
4913  try: self.this.append(this)
4914  except: self.this = this
4915  def get_version_info(self):
4916  """get_version_info(MonteCarlo self) -> VersionInfo"""
4917  return _IMP_core.MonteCarlo_get_version_info(self)
4918 
4919  def set_return_best(self, *args):
4920  """set_return_best(MonteCarlo self, bool tf)"""
4921  return _IMP_core.MonteCarlo_set_return_best(self, *args)
4922 
4923  def set_kt(self, *args):
4924  """set_kt(MonteCarlo self, IMP::Float t)"""
4925  return _IMP_core.MonteCarlo_set_kt(self, *args)
4926 
4927  def get_kt(self):
4928  """get_kt(MonteCarlo self) -> IMP::Float"""
4929  return _IMP_core.MonteCarlo_get_kt(self)
4930 
4931  def get_last_accepted_energy(self):
4932  """get_last_accepted_energy(MonteCarlo self) -> double"""
4933  return _IMP_core.MonteCarlo_get_last_accepted_energy(self)
4934 
4935  def get_best_accepted_energy(self):
4936  """get_best_accepted_energy(MonteCarlo self) -> double"""
4937  return _IMP_core.MonteCarlo_get_best_accepted_energy(self)
4938 
4939  def get_number_of_forward_steps(self):
4940  """get_number_of_forward_steps(MonteCarlo self) -> unsigned int"""
4941  return _IMP_core.MonteCarlo_get_number_of_forward_steps(self)
4942 
4943  def get_number_of_downward_steps(self):
4944  """get_number_of_downward_steps(MonteCarlo self) -> unsigned int"""
4945  return _IMP_core.MonteCarlo_get_number_of_downward_steps(self)
4946 
4947  def get_number_of_upward_steps(self):
4948  """get_number_of_upward_steps(MonteCarlo self) -> unsigned int"""
4949  return _IMP_core.MonteCarlo_get_number_of_upward_steps(self)
4950 
4951  def get_number_of_proposed_steps(self):
4952  """get_number_of_proposed_steps(MonteCarlo self) -> unsigned int"""
4953  return _IMP_core.MonteCarlo_get_number_of_proposed_steps(self)
4954 
4955  def get_number_of_accepted_steps(self):
4956  """get_number_of_accepted_steps(MonteCarlo self) -> unsigned int"""
4957  return _IMP_core.MonteCarlo_get_number_of_accepted_steps(self)
4958 
4959  def reset_statistics(self):
4960  """reset_statistics(MonteCarlo self)"""
4961  return _IMP_core.MonteCarlo_reset_statistics(self)
4962 
4963  def set_score_threshold(self, *args):
4964  """set_score_threshold(MonteCarlo self, double s)"""
4965  return _IMP_core.MonteCarlo_set_score_threshold(self, *args)
4966 
4967  def get_score_threshold(self):
4968  """get_score_threshold(MonteCarlo self) -> double"""
4969  return _IMP_core.MonteCarlo_get_score_threshold(self)
4970 
4971  def set_maximum_difference(self, *args):
4972  """set_maximum_difference(MonteCarlo self, double d)"""
4973  return _IMP_core.MonteCarlo_set_maximum_difference(self, *args)
4974 
4975  def get_maximum_difference(self):
4976  """get_maximum_difference(MonteCarlo self) -> double"""
4977  return _IMP_core.MonteCarlo_get_maximum_difference(self)
4978 
4979  def remove_mover(self, *args):
4980  """remove_mover(MonteCarlo self, MonteCarloMover d)"""
4981  return _IMP_core.MonteCarlo_remove_mover(self, *args)
4982 
4983  def remove_movers(self, *args):
4984  """remove_movers(MonteCarlo self, IMP::core::MonteCarloMovers const & d)"""
4985  return _IMP_core.MonteCarlo_remove_movers(self, *args)
4986 
4987  def set_movers(self, *args):
4988  """set_movers(MonteCarlo self, IMP::core::MonteCarloMovers const & ps)"""
4989  return _IMP_core.MonteCarlo_set_movers(self, *args)
4990 
4991  def set_movers_order(self, *args):
4992  """set_movers_order(MonteCarlo self, IMP::core::MonteCarloMovers const & objs)"""
4993  return _IMP_core.MonteCarlo_set_movers_order(self, *args)
4994 
4995  def add_mover(self, *args):
4996  """add_mover(MonteCarlo self, MonteCarloMover obj) -> unsigned int"""
4997  return _IMP_core.MonteCarlo_add_mover(self, *args)
4998 
4999  def add_movers(self, *args):
5000  """add_movers(MonteCarlo self, IMP::core::MonteCarloMovers const & objs)"""
5001  return _IMP_core.MonteCarlo_add_movers(self, *args)
5002 
5003  def clear_movers(self):
5004  """clear_movers(MonteCarlo self)"""
5005  return _IMP_core.MonteCarlo_clear_movers(self)
5006 
5007  def get_number_of_movers(self):
5008  """get_number_of_movers(MonteCarlo self) -> unsigned int"""
5009  return _IMP_core.MonteCarlo_get_number_of_movers(self)
5010 
5011  def get_has_movers(self):
5012  """get_has_movers(MonteCarlo self) -> bool"""
5013  return _IMP_core.MonteCarlo_get_has_movers(self)
5014 
5015  def get_mover(self, *args):
5016  """get_mover(MonteCarlo self, unsigned int i) -> MonteCarloMover"""
5017  return _IMP_core.MonteCarlo_get_mover(self, *args)
5018 
5019  def get_movers(self):
5020  """get_movers(MonteCarlo self) -> IMP::core::MonteCarloMovers"""
5021  return _IMP_core.MonteCarlo_get_movers(self)
5022 
5023  def reserve_movers(self, *args):
5024  """reserve_movers(MonteCarlo self, unsigned int sz)"""
5025  return _IMP_core.MonteCarlo_reserve_movers(self, *args)
5026 
5027  def set_incremental_scoring_function(self, *args):
5028  """set_incremental_scoring_function(MonteCarlo self, IncrementalScoringFunction isf)"""
5029  return _IMP_core.MonteCarlo_set_incremental_scoring_function(self, *args)
5030 
5031  def get_use_incremental_scoring_function(self):
5032  """get_use_incremental_scoring_function(MonteCarlo self) -> bool"""
5033  return _IMP_core.MonteCarlo_get_use_incremental_scoring_function(self)
5034 
5035  def get_incremental_scoring_function(self):
5036  """get_incremental_scoring_function(MonteCarlo self) -> IncrementalScoringFunction"""
5037  return _IMP_core.MonteCarlo_get_incremental_scoring_function(self)
5038 
5039  def __str__(self):
5040  """__str__(MonteCarlo self) -> std::string"""
5041  return _IMP_core.MonteCarlo___str__(self)
5042 
5043  def __repr__(self):
5044  """__repr__(MonteCarlo self) -> std::string"""
5045  return _IMP_core.MonteCarlo___repr__(self)
5046 
5047  def get_from(o):
5048  return _object_cast_to_MonteCarlo(o)
5049  get_from = staticmethod(get_from)
5050 
5051 MonteCarlo_swigregister = _IMP_core.MonteCarlo_swigregister
5052 MonteCarlo_swigregister(MonteCarlo)
5053 
5054 class MonteCarloWithLocalOptimization(MonteCarlo):
5055  """Proxy of C++ IMP::core::MonteCarloWithLocalOptimization class"""
5056  __swig_setmethods__ = {}
5057  for _s in [MonteCarlo]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
5058  __setattr__ = lambda self, name, value: _swig_setattr(self, MonteCarloWithLocalOptimization, name, value)
5059  __swig_getmethods__ = {}
5060  for _s in [MonteCarlo]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
5061  __getattr__ = lambda self, name: _swig_getattr(self, MonteCarloWithLocalOptimization, name)
5062  def __init__(self, *args):
5063  """__init__(IMP::core::MonteCarloWithLocalOptimization self, Optimizer opt, unsigned int steps) -> MonteCarloWithLocalOptimization"""
5064  this = _IMP_core.new_MonteCarloWithLocalOptimization(*args)
5065  try: self.this.append(this)
5066  except: self.this = this
5067  def get_number_of_steps(self):
5068  """get_number_of_steps(MonteCarloWithLocalOptimization self) -> unsigned int"""
5069  return _IMP_core.MonteCarloWithLocalOptimization_get_number_of_steps(self)
5070 
5071  def get_local_optimizer(self):
5072  """get_local_optimizer(MonteCarloWithLocalOptimization self) -> Optimizer"""
5073  return _IMP_core.MonteCarloWithLocalOptimization_get_local_optimizer(self)
5074 
5075  def __str__(self):
5076  """__str__(MonteCarloWithLocalOptimization self) -> std::string"""
5077  return _IMP_core.MonteCarloWithLocalOptimization___str__(self)
5078 
5079  def __repr__(self):
5080  """__repr__(MonteCarloWithLocalOptimization self) -> std::string"""
5081  return _IMP_core.MonteCarloWithLocalOptimization___repr__(self)
5082 
5083  def get_from(o):
5084  return _object_cast_to_MonteCarloWithLocalOptimization(o)
5085  get_from = staticmethod(get_from)
5086 
5087 MonteCarloWithLocalOptimization_swigregister = _IMP_core.MonteCarloWithLocalOptimization_swigregister
5088 MonteCarloWithLocalOptimization_swigregister(MonteCarloWithLocalOptimization)
5089 
5090 class MonteCarloWithBasinHopping(MonteCarloWithLocalOptimization):
5091  """Proxy of C++ IMP::core::MonteCarloWithBasinHopping class"""
5092  __swig_setmethods__ = {}
5093  for _s in [MonteCarloWithLocalOptimization]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
5094  __setattr__ = lambda self, name, value: _swig_setattr(self, MonteCarloWithBasinHopping, name, value)
5095  __swig_getmethods__ = {}
5096  for _s in [MonteCarloWithLocalOptimization]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
5097  __getattr__ = lambda self, name: _swig_getattr(self, MonteCarloWithBasinHopping, name)
5098  def __init__(self, *args):
5099  """__init__(IMP::core::MonteCarloWithBasinHopping self, Optimizer opt, unsigned int ns) -> MonteCarloWithBasinHopping"""
5100  this = _IMP_core.new_MonteCarloWithBasinHopping(*args)
5101  try: self.this.append(this)
5102  except: self.this = this
5103  def __str__(self):
5104  """__str__(MonteCarloWithBasinHopping self) -> std::string"""
5105  return _IMP_core.MonteCarloWithBasinHopping___str__(self)
5106 
5107  def __repr__(self):
5108  """__repr__(MonteCarloWithBasinHopping self) -> std::string"""
5109  return _IMP_core.MonteCarloWithBasinHopping___repr__(self)
5110 
5111  def get_from(o):
5112  return _object_cast_to_MonteCarloWithBasinHopping(o)
5113  get_from = staticmethod(get_from)
5114 
5115 MonteCarloWithBasinHopping_swigregister = _IMP_core.MonteCarloWithBasinHopping_swigregister
5116 MonteCarloWithBasinHopping_swigregister(MonteCarloWithBasinHopping)
5117 
5118 class NeighborsTable(IMP.kernel.ScoreState):
5119  """Proxy of C++ IMP::core::NeighborsTable class"""
5120  __swig_setmethods__ = {}
5121  for _s in [IMP.kernel.ScoreState]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
5122  __setattr__ = lambda self, name, value: _swig_setattr(self, NeighborsTable, name, value)
5123  __swig_getmethods__ = {}
5124  for _s in [IMP.kernel.ScoreState]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
5125  __getattr__ = lambda self, name: _swig_getattr(self, NeighborsTable, name)
5126  def __init__(self, *args):
5127  """
5128  __init__(IMP::core::NeighborsTable self, PairContainer input, std::string name="CloseNeighborsTable%1%") -> NeighborsTable
5129  __init__(IMP::core::NeighborsTable self, PairContainer input) -> NeighborsTable
5130  """
5131  this = _IMP_core.new_NeighborsTable(*args)
5132  try: self.this.append(this)
5133  except: self.this = this
5134  def get_neighbors(self, *args):
5135  """get_neighbors(NeighborsTable self, IMP::kernel::ParticleIndex pi) -> IMP::kernel::ParticleIndexes const &"""
5136  return _IMP_core.NeighborsTable_get_neighbors(self, *args)
5137 
5138  def get_version_info(self):
5139  """get_version_info(NeighborsTable self) -> VersionInfo"""
5140  return _IMP_core.NeighborsTable_get_version_info(self)
5141 
5142  def __str__(self):
5143  """__str__(NeighborsTable self) -> std::string"""
5144  return _IMP_core.NeighborsTable___str__(self)
5145 
5146  def __repr__(self):
5147  """__repr__(NeighborsTable self) -> std::string"""
5148  return _IMP_core.NeighborsTable___repr__(self)
5149 
5150  def get_from(o):
5151  return _object_cast_to_NeighborsTable(o)
5152  get_from = staticmethod(get_from)
5153 
5154 NeighborsTable_swigregister = _IMP_core.NeighborsTable_swigregister
5155 NeighborsTable_swigregister(NeighborsTable)
5156 
5157 class NormalMover(MonteCarloMover):
5158  """Proxy of C++ IMP::core::NormalMover class"""
5159  __swig_setmethods__ = {}
5160  for _s in [MonteCarloMover]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
5161  __setattr__ = lambda self, name, value: _swig_setattr(self, NormalMover, name, value)
5162  __swig_getmethods__ = {}
5163  for _s in [MonteCarloMover]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
5164  __getattr__ = lambda self, name: _swig_getattr(self, NormalMover, name)
5165  def __init__(self, *args):
5166  """
5167  __init__(IMP::core::NormalMover self, Model m, IMP::kernel::ParticleIndex pi, IMP::kernel::FloatKeys const & vars, double stddev) -> NormalMover
5168  __init__(IMP::core::NormalMover self, Model m, IMP::kernel::ParticleIndex pi, double stddev) -> NormalMover
5169  __init__(IMP::core::NormalMover self, IMP::kernel::ParticlesTemp const & sc, IMP::kernel::FloatKeys const & vars, IMP::Float sigma) -> NormalMover
5170  __init__(IMP::core::NormalMover self, IMP::kernel::ParticlesTemp const & sc, IMP::Float radius) -> NormalMover
5171  """
5172  this = _IMP_core.new_NormalMover(*args)
5173  try: self.this.append(this)
5174  except: self.this = this
5175  def set_sigma(self, *args):
5176  """set_sigma(NormalMover self, IMP::Float sigma)"""
5177  return _IMP_core.NormalMover_set_sigma(self, *args)
5178 
5179  def get_sigma(self):
5180  """get_sigma(NormalMover self) -> IMP::Float"""
5181  return _IMP_core.NormalMover_get_sigma(self)
5182 
5183  def get_version_info(self):
5184  """get_version_info(NormalMover self) -> VersionInfo"""
5185  return _IMP_core.NormalMover_get_version_info(self)
5186 
5187  def __str__(self):
5188  """__str__(NormalMover self) -> std::string"""
5189  return _IMP_core.NormalMover___str__(self)
5190 
5191  def __repr__(self):
5192  """__repr__(NormalMover self) -> std::string"""
5193  return _IMP_core.NormalMover___repr__(self)
5194 
5195  def get_from(o):
5196  return _object_cast_to_NormalMover(o)
5197  get_from = staticmethod(get_from)
5198 
5199 NormalMover_swigregister = _IMP_core.NormalMover_swigregister
5200 NormalMover_swigregister(NormalMover)
5201 
5202 class OpenCubicSpline(_OpenCubicSplineBase):
5203  """Proxy of C++ IMP::core::OpenCubicSpline class"""
5204  __swig_setmethods__ = {}
5205  for _s in [_OpenCubicSplineBase]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
5206  __setattr__ = lambda self, name, value: _swig_setattr(self, OpenCubicSpline, name, value)
5207  __swig_getmethods__ = {}
5208  for _s in [_OpenCubicSplineBase]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
5209  __getattr__ = lambda self, name: _swig_getattr(self, OpenCubicSpline, name)
5210  def __init__(self, *args):
5211  """
5212  __init__(IMP::core::OpenCubicSpline self, IMP::Floats const & values, IMP::Float minrange, IMP::Float spacing, bool extend=False) -> OpenCubicSpline
5213  __init__(IMP::core::OpenCubicSpline self, IMP::Floats const & values, IMP::Float minrange, IMP::Float spacing) -> OpenCubicSpline
5214  """
5215  this = _IMP_core.new_OpenCubicSpline(*args)
5216  try: self.this.append(this)
5217  except: self.this = this
5218  def __str__(self):
5219  """__str__(OpenCubicSpline self) -> std::string"""
5220  return _IMP_core.OpenCubicSpline___str__(self)
5221 
5222  def __repr__(self):
5223  """__repr__(OpenCubicSpline self) -> std::string"""
5224  return _IMP_core.OpenCubicSpline___repr__(self)
5225 
5226  def get_from(o):
5227  return _object_cast_to_OpenCubicSpline(o)
5228  get_from = staticmethod(get_from)
5229 
5230  __swig_destroy__ = _IMP_core.delete_OpenCubicSpline
5231  __del__ = lambda self : None;
5232 OpenCubicSpline_swigregister = _IMP_core.OpenCubicSpline_swigregister
5233 OpenCubicSpline_swigregister(OpenCubicSpline)
5234 
5235 class QuadraticClosePairsFinder(ClosePairsFinder):
5236  """Proxy of C++ IMP::core::QuadraticClosePairsFinder class"""
5237  __swig_setmethods__ = {}
5238  for _s in [ClosePairsFinder]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
5239  __setattr__ = lambda self, name, value: _swig_setattr(self, QuadraticClosePairsFinder, name, value)
5240  __swig_getmethods__ = {}
5241  for _s in [ClosePairsFinder]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
5242  __getattr__ = lambda self, name: _swig_getattr(self, QuadraticClosePairsFinder, name)
5243  def __init__(self):
5244  """__init__(IMP::core::QuadraticClosePairsFinder self) -> QuadraticClosePairsFinder"""
5245  this = _IMP_core.new_QuadraticClosePairsFinder()
5246  try: self.this.append(this)
5247  except: self.this = this
5248  def get_are_close(self, *args):
5249  """
5250  get_are_close(QuadraticClosePairsFinder self, Particle a, Particle b) -> bool
5251  get_are_close(QuadraticClosePairsFinder self, Model m, IMP::kernel::ParticleIndex a, IMP::kernel::ParticleIndex b) -> bool
5252  """
5253  return _IMP_core.QuadraticClosePairsFinder_get_are_close(self, *args)
5254 
5255  def get_close_pairs(self, *args):
5256  """
5257  get_close_pairs(QuadraticClosePairsFinder self, IMP::kernel::ParticlesTemp const & pc) -> IMP::kernel::ParticlePairsTemp
5258  get_close_pairs(QuadraticClosePairsFinder self, IMP::kernel::ParticlesTemp const & pca, IMP::kernel::ParticlesTemp const & pcb) -> IMP::kernel::ParticlePairsTemp
5259  get_close_pairs(QuadraticClosePairsFinder self, IMP::algebra::BoundingBox3Ds const & bbs) -> IMP::IntPairs
5260  get_close_pairs(QuadraticClosePairsFinder self, IMP::algebra::BoundingBox3Ds const & bas, IMP::algebra::BoundingBox3Ds const & bbs) -> IMP::IntPairs
5261  get_close_pairs(QuadraticClosePairsFinder self, Model m, IMP::kernel::ParticleIndexes const & pc) -> IMP::kernel::ParticleIndexPairs
5262  get_close_pairs(QuadraticClosePairsFinder self, Model m, IMP::kernel::ParticleIndexes const & pca, IMP::kernel::ParticleIndexes const & pcb) -> IMP::kernel::ParticleIndexPairs
5263  """
5264  return _IMP_core.QuadraticClosePairsFinder_get_close_pairs(self, *args)
5265 
5266  def do_get_inputs(self, *args):
5267  """do_get_inputs(QuadraticClosePairsFinder self, Model m, IMP::kernel::ParticleIndexes const & pis) -> IMP::kernel::ModelObjectsTemp"""
5268  return _IMP_core.QuadraticClosePairsFinder_do_get_inputs(self, *args)
5269 
5270  def get_version_info(self):
5271  """get_version_info(QuadraticClosePairsFinder self) -> VersionInfo"""
5272  return _IMP_core.QuadraticClosePairsFinder_get_version_info(self)
5273 
5274  def __str__(self):
5275  """__str__(QuadraticClosePairsFinder self) -> std::string"""
5276  return _IMP_core.QuadraticClosePairsFinder___str__(self)
5277 
5278  def __repr__(self):
5279  """__repr__(QuadraticClosePairsFinder self) -> std::string"""
5280  return _IMP_core.QuadraticClosePairsFinder___repr__(self)
5281 
5282  def get_from(o):
5283  return _object_cast_to_QuadraticClosePairsFinder(o)
5284  get_from = staticmethod(get_from)
5285 
5286 QuadraticClosePairsFinder_swigregister = _IMP_core.QuadraticClosePairsFinder_swigregister
5287 QuadraticClosePairsFinder_swigregister(QuadraticClosePairsFinder)
5288 
5289 class RefinedPairsPairScore(IMP.kernel.PairScore):
5290  """Proxy of C++ IMP::core::RefinedPairsPairScore class"""
5291  __swig_setmethods__ = {}
5292  for _s in [IMP.kernel.PairScore]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
5293  __setattr__ = lambda self, name, value: _swig_setattr(self, RefinedPairsPairScore, name, value)
5294  __swig_getmethods__ = {}
5295  for _s in [IMP.kernel.PairScore]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
5296  __getattr__ = lambda self, name: _swig_getattr(self, RefinedPairsPairScore, name)
5297  def __init__(self, *args):
5298  """__init__(IMP::core::RefinedPairsPairScore self, Refiner r, PairScore f) -> RefinedPairsPairScore"""
5299  this = _IMP_core.new_RefinedPairsPairScore(*args)
5300  try: self.this.append(this)
5301  except: self.this = this
5302  def do_get_inputs(self, *args):
5303  """do_get_inputs(RefinedPairsPairScore self, Model m, IMP::kernel::ParticleIndexes const & pis) -> IMP::kernel::ModelObjectsTemp"""
5304  return _IMP_core.RefinedPairsPairScore_do_get_inputs(self, *args)
5305 
5306  def get_version_info(self):
5307  """get_version_info(RefinedPairsPairScore self) -> VersionInfo"""
5308  return _IMP_core.RefinedPairsPairScore_get_version_info(self)
5309 
5310  def __str__(self):
5311  """__str__(RefinedPairsPairScore self) -> std::string"""
5312  return _IMP_core.RefinedPairsPairScore___str__(self)
5313 
5314  def __repr__(self):
5315  """__repr__(RefinedPairsPairScore self) -> std::string"""
5316  return _IMP_core.RefinedPairsPairScore___repr__(self)
5317 
5318  def get_from(o):
5319  return _object_cast_to_RefinedPairsPairScore(o)
5320  get_from = staticmethod(get_from)
5321 
5322 RefinedPairsPairScore_swigregister = _IMP_core.RefinedPairsPairScore_swigregister
5323 RefinedPairsPairScore_swigregister(RefinedPairsPairScore)
5324 
5325 class RigidBody(XYZ):
5326  """Proxy of C++ IMP::core::RigidBody class"""
5327  __swig_setmethods__ = {}
5328  for _s in [XYZ]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
5329  __setattr__ = lambda self, name, value: _swig_setattr(self, RigidBody, name, value)
5330  __swig_getmethods__ = {}
5331  for _s in [XYZ]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
5332  __getattr__ = lambda self, name: _swig_getattr(self, RigidBody, name)
5333  def get_members(self):
5334  """get_members(RigidBody self) -> IMP::core::RigidMembers"""
5335  return _IMP_core.RigidBody_get_members(self)
5336 
5337  def get_rigid_members(self):
5338  """get_rigid_members(RigidBody self) -> IMP::core::RigidMembers"""
5339  return _IMP_core.RigidBody_get_rigid_members(self)
5340 
5341  def get_member_particle_indexes(self):
5342  """get_member_particle_indexes(RigidBody self) -> IMP::kernel::ParticleIndexes const &"""
5343  return _IMP_core.RigidBody_get_member_particle_indexes(self)
5344 
5345  def get_body_member_particle_indexes(self):
5346  """get_body_member_particle_indexes(RigidBody self) -> IMP::kernel::ParticleIndexes const &"""
5347  return _IMP_core.RigidBody_get_body_member_particle_indexes(self)
5348 
5349  def get_member_indexes(self):
5350  """get_member_indexes(RigidBody self) -> IMP::kernel::ParticleIndexes"""
5351  return _IMP_core.RigidBody_get_member_indexes(self)
5352 
5353  def __init__(self, *args):
5354  """
5355  __init__(IMP::core::RigidBody self) -> RigidBody
5356  __init__(IMP::core::RigidBody self, Model m, ::IMP::kernel::ParticleIndex id) -> RigidBody
5357  __init__(IMP::core::RigidBody self, _ParticleAdaptor d) -> RigidBody
5358  """
5359  this = _IMP_core.new_RigidBody(*args)
5360  try: self.this.append(this)
5361  except: self.this = this
5362  def show(self, *args):
5363  """
5364  show(RigidBody self, _ostream out=std::cout)
5365  show(RigidBody self)
5366  """
5367  return _IMP_core.RigidBody_show(self, *args)
5368 
5369  def setup_particle(*args):
5370  """
5371  setup_particle(Model m, IMP::kernel::ParticleIndex pi, _ParticleIndexesAdaptor ps) -> RigidBody
5372  setup_particle(_ParticleAdaptor decorator, _ParticleIndexesAdaptor ps) -> RigidBody
5373  setup_particle(Model m, IMP::kernel::ParticleIndex pi, ReferenceFrame3D rf) -> RigidBody
5374  setup_particle(_ParticleAdaptor decorator, ReferenceFrame3D rf) -> RigidBody
5375  """
5376  return _IMP_core.RigidBody_setup_particle(*args)
5377 
5378  if _newclass:setup_particle = staticmethod(setup_particle)
5379  __swig_getmethods__["setup_particle"] = lambda x: setup_particle
5380  def teardown_particle(*args):
5381  """teardown_particle(RigidBody rb)"""
5382  return _IMP_core.RigidBody_teardown_particle(*args)
5383 
5384  if _newclass:teardown_particle = staticmethod(teardown_particle)
5385  __swig_getmethods__["teardown_particle"] = lambda x: teardown_particle
5386  __swig_destroy__ = _IMP_core.delete_RigidBody
5387  __del__ = lambda self : None;
5388  def get_is_setup(*args):
5389  """
5390  get_is_setup(_ParticleAdaptor p) -> bool
5391  get_is_setup(Model m, IMP::kernel::ParticleIndex pi) -> bool
5392  """
5393  return _IMP_core.RigidBody_get_is_setup(*args)
5394 
5395  if _newclass:get_is_setup = staticmethod(get_is_setup)
5396  __swig_getmethods__["get_is_setup"] = lambda x: get_is_setup
5397  def get_coordinates(self):
5398  """get_coordinates(RigidBody self) -> Vector3D"""
5399  return _IMP_core.RigidBody_get_coordinates(self)
5400 
5401  def get_reference_frame(self):
5402  """get_reference_frame(RigidBody self) -> ReferenceFrame3D"""
5403  return _IMP_core.RigidBody_get_reference_frame(self)
5404 
5405  def set_reference_frame(self, *args):
5406  """set_reference_frame(RigidBody self, ReferenceFrame3D tr)"""
5407  return _IMP_core.RigidBody_set_reference_frame(self, *args)
5408 
5409  def set_reference_frame_lazy(self, *args):
5410  """set_reference_frame_lazy(RigidBody self, ReferenceFrame3D tr)"""
5411  return _IMP_core.RigidBody_set_reference_frame_lazy(self, *args)
5412 
5413  def set_reference_frame_from_members(self, *args):
5414  """set_reference_frame_from_members(RigidBody self, IMP::kernel::ParticleIndexes const & members)"""
5415  return _IMP_core.RigidBody_set_reference_frame_from_members(self, *args)
5416 
5417  def add_to_derivatives(self, *args):
5418  """
5419  add_to_derivatives(RigidBody self, Vector3D derivative, Vector3D local_location, DerivativeAccumulator da)
5420  add_to_derivatives(RigidBody self, Vector3D derivative, Vector3D global_derivative, Vector3D local_location, Rotation3D rot,
5421  DerivativeAccumulator da)
5422  """
5423  return _IMP_core.RigidBody_add_to_derivatives(self, *args)
5424 
5425  def get_torque(self):
5426  """get_torque(RigidBody self) -> Vector3D"""
5427  return _IMP_core.RigidBody_get_torque(self)
5428 
5429  def get_coordinates_are_optimized(self):
5430  """get_coordinates_are_optimized(RigidBody self) -> bool"""
5431  return _IMP_core.RigidBody_get_coordinates_are_optimized(self)
5432 
5433  def set_coordinates_are_optimized(self, *args):
5434  """set_coordinates_are_optimized(RigidBody self, bool tf)"""
5435  return _IMP_core.RigidBody_set_coordinates_are_optimized(self, *args)
5436 
5437  def normalize_rotation(self):
5438  """normalize_rotation(RigidBody self)"""
5439  return _IMP_core.RigidBody_normalize_rotation(self)
5440 
5441  def update_members(self):
5442  """update_members(RigidBody self)"""
5443  return _IMP_core.RigidBody_update_members(self)
5444 
5445  def get_rotational_derivatives(self):
5446  """get_rotational_derivatives(RigidBody self) -> Vector4D"""
5447  return _IMP_core.RigidBody_get_rotational_derivatives(self)
5448 
5449  def get_number_of_members(self):
5450  """get_number_of_members(RigidBody self) -> unsigned int"""
5451  return _IMP_core.RigidBody_get_number_of_members(self)
5452 
5453  def get_member(self, *args):
5454  """get_member(RigidBody self, unsigned int i) -> RigidMember"""
5455  return _IMP_core.RigidBody_get_member(self, *args)
5456 
5457  def add_member(self, *args):
5458  """add_member(RigidBody self, _ParticleIndexAdaptor p)"""
5459  return _IMP_core.RigidBody_add_member(self, *args)
5460 
5461  def add_non_rigid_member(self, *args):
5462  """add_non_rigid_member(RigidBody self, _ParticleIndexAdaptor p)"""
5463  return _IMP_core.RigidBody_add_non_rigid_member(self, *args)
5464 
5465  def set_is_rigid_member(self, *args):
5466  """set_is_rigid_member(RigidBody self, IMP::kernel::ParticleIndex pi, bool tf)"""
5467  return _IMP_core.RigidBody_set_is_rigid_member(self, *args)
5468 
5469  def add_attribute(self, *args):
5470  """
5471  add_attribute(RigidBody self, FloatKey k, IMP::Float v, bool opt)
5472  add_attribute(RigidBody self, FloatKey a0, IMP::Float a1)
5473  add_attribute(RigidBody self, IntKey a0, IMP::Int a1)
5474  add_attribute(RigidBody self, StringKey a0, IMP::String a1)
5475  add_attribute(RigidBody self, ParticleIndexKey a0, Particle a1)
5476  add_attribute(RigidBody self, ObjectKey a0, Object a1)
5477  """
5478  return _IMP_core.RigidBody_add_attribute(self, *args)
5479 
5480  def get_value(self, *args):
5481  """
5482  get_value(RigidBody self, FloatKey a0) -> IMP::Float
5483  get_value(RigidBody self, IntKey a0) -> IMP::Int
5484  get_value(RigidBody self, StringKey a0) -> IMP::String
5485  get_value(RigidBody self, ParticleIndexKey a0) -> Particle
5486  get_value(RigidBody self, ObjectKey a0) -> Object
5487  """
5488  return _IMP_core.RigidBody_get_value(self, *args)
5489 
5490  def set_value(self, *args):
5491  """
5492  set_value(RigidBody self, FloatKey a0, IMP::Float a1)
5493  set_value(RigidBody self, IntKey a0, IMP::Int a1)
5494  set_value(RigidBody self, StringKey a0, IMP::String a1)
5495  set_value(RigidBody self, ParticleIndexKey a0, Particle a1)
5496  set_value(RigidBody self, ObjectKey a0, Object a1)
5497  """
5498  return _IMP_core.RigidBody_set_value(self, *args)
5499 
5500  def remove_attribute(self, *args):
5501  """
5502  remove_attribute(RigidBody self, FloatKey a0)
5503  remove_attribute(RigidBody self, IntKey a0)
5504  remove_attribute(RigidBody self, StringKey a0)
5505  remove_attribute(RigidBody self, ParticleIndexKey a0)
5506  remove_attribute(RigidBody self, ObjectKey a0)
5507  """
5508  return _IMP_core.RigidBody_remove_attribute(self, *args)
5509 
5510  def has_attribute(self, *args):
5511  """
5512  has_attribute(RigidBody self, FloatKey a0) -> bool
5513  has_attribute(RigidBody self, IntKey a0) -> bool
5514  has_attribute(RigidBody self, StringKey a0) -> bool
5515  has_attribute(RigidBody self, ParticleIndexKey a0) -> bool
5516  has_attribute(RigidBody self, ObjectKey a0) -> bool
5517  """
5518  return _IMP_core.RigidBody_has_attribute(self, *args)
5519 
5520  def get_derivative(self, *args):
5521  """get_derivative(RigidBody self, FloatKey a0) -> double"""
5522  return _IMP_core.RigidBody_get_derivative(self, *args)
5523 
5524  def get_name(self):
5525  """get_name(RigidBody self) -> std::string"""
5526  return _IMP_core.RigidBody_get_name(self)
5527 
5528  def clear_caches(self):
5529  """clear_caches(RigidBody self)"""
5530  return _IMP_core.RigidBody_clear_caches(self)
5531 
5532  def set_name(self, *args):
5533  """set_name(RigidBody self, std::string a0)"""
5534  return _IMP_core.RigidBody_set_name(self, *args)
5535 
5536  def set_check_level(self, *args):
5537  """set_check_level(RigidBody self, IMP::base::CheckLevel a0)"""
5538  return _IMP_core.RigidBody_set_check_level(self, *args)
5539 
5540  def add_to_derivative(self, *args):
5541  """add_to_derivative(RigidBody self, FloatKey a0, double a1, DerivativeAccumulator a2)"""
5542  return _IMP_core.RigidBody_add_to_derivative(self, *args)
5543 
5544  def set_is_optimized(self, *args):
5545  """set_is_optimized(RigidBody self, FloatKey a0, bool a1)"""
5546  return _IMP_core.RigidBody_set_is_optimized(self, *args)
5547 
5548  def get_is_optimized(self, *args):
5549  """get_is_optimized(RigidBody self, FloatKey a0) -> bool"""
5550  return _IMP_core.RigidBody_get_is_optimized(self, *args)
5551 
5552  def get_check_level(self):
5553  """get_check_level(RigidBody self) -> IMP::base::CheckLevel"""
5554  return _IMP_core.RigidBody_get_check_level(self)
5555 
5556  def __eq__(self, *args):
5557  """
5558  __eq__(RigidBody self, RigidBody o) -> bool
5559  __eq__(RigidBody self, Particle d) -> bool
5560  """
5561  return _IMP_core.RigidBody___eq__(self, *args)
5562 
5563  def __ne__(self, *args):
5564  """
5565  __ne__(RigidBody self, RigidBody o) -> bool
5566  __ne__(RigidBody self, Particle d) -> bool
5567  """
5568  return _IMP_core.RigidBody___ne__(self, *args)
5569 
5570  def __le__(self, *args):
5571  """
5572  __le__(RigidBody self, RigidBody o) -> bool
5573  __le__(RigidBody self, Particle d) -> bool
5574  """
5575  return _IMP_core.RigidBody___le__(self, *args)
5576 
5577  def __lt__(self, *args):
5578  """
5579  __lt__(RigidBody self, RigidBody o) -> bool
5580  __lt__(RigidBody self, Particle d) -> bool
5581  """
5582  return _IMP_core.RigidBody___lt__(self, *args)
5583 
5584  def __ge__(self, *args):
5585  """
5586  __ge__(RigidBody self, RigidBody o) -> bool
5587  __ge__(RigidBody self, Particle d) -> bool
5588  """
5589  return _IMP_core.RigidBody___ge__(self, *args)
5590 
5591  def __gt__(self, *args):
5592  """
5593  __gt__(RigidBody self, RigidBody o) -> bool
5594  __gt__(RigidBody self, Particle d) -> bool
5595  """
5596  return _IMP_core.RigidBody___gt__(self, *args)
5597 
5598  def __str__(self):
5599  """__str__(RigidBody self) -> std::string"""
5600  return _IMP_core.RigidBody___str__(self)
5601 
5602  def __repr__(self):
5603  """__repr__(RigidBody self) -> std::string"""
5604  return _IMP_core.RigidBody___repr__(self)
5605 
5606 RigidBody_swigregister = _IMP_core.RigidBody_swigregister
5607 RigidBody_swigregister(RigidBody)
5608 
5609 def RigidBody_setup_particle(*args):
5610  """
5611  setup_particle(Model m, IMP::kernel::ParticleIndex pi, _ParticleIndexesAdaptor ps) -> RigidBody
5612  setup_particle(_ParticleAdaptor decorator, _ParticleIndexesAdaptor ps) -> RigidBody
5613  setup_particle(Model m, IMP::kernel::ParticleIndex pi, ReferenceFrame3D rf) -> RigidBody
5614  RigidBody_setup_particle(_ParticleAdaptor decorator, ReferenceFrame3D rf) -> RigidBody
5615  """
5616  return _IMP_core.RigidBody_setup_particle(*args)
5617 
5618 def RigidBody_teardown_particle(*args):
5619  """RigidBody_teardown_particle(RigidBody rb)"""
5620  return _IMP_core.RigidBody_teardown_particle(*args)
5621 
5622 def RigidBody_get_is_setup(*args):
5623  """
5624  get_is_setup(_ParticleAdaptor p) -> bool
5625  RigidBody_get_is_setup(Model m, IMP::kernel::ParticleIndex pi) -> bool
5626  """
5627  return _IMP_core.RigidBody_get_is_setup(*args)
5628 
5629 
5630 def add_rigid_body_cache_key(*args):
5631  """add_rigid_body_cache_key(ObjectKey k)"""
5632  return _IMP_core.add_rigid_body_cache_key(*args)
5633 class RigidBodyMember(XYZ):
5634  """Proxy of C++ IMP::core::RigidBodyMember class"""
5635  __swig_setmethods__ = {}
5636  for _s in [XYZ]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
5637  __setattr__ = lambda self, name, value: _swig_setattr(self, RigidBodyMember, name, value)
5638  __swig_getmethods__ = {}
5639  for _s in [XYZ]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
5640  __getattr__ = lambda self, name: _swig_getattr(self, RigidBodyMember, name)
5641  def __init__(self, *args):
5642  """
5643  __init__(IMP::core::RigidBodyMember self) -> RigidBodyMember
5644  __init__(IMP::core::RigidBodyMember self, Model m, ::IMP::kernel::ParticleIndex id) -> RigidBodyMember
5645  __init__(IMP::core::RigidBodyMember self, _ParticleAdaptor d) -> RigidBodyMember
5646  """
5647  this = _IMP_core.new_RigidBodyMember(*args)
5648  try: self.this.append(this)
5649  except: self.this = this
5650  def show(self, *args):
5651  """
5652  show(RigidBodyMember self, _ostream out=std::cout)
5653  show(RigidBodyMember self)
5654  """
5655  return _IMP_core.RigidBodyMember_show(self, *args)
5656 
5657  def get_rigid_body(self):
5658  """get_rigid_body(RigidBodyMember self) -> RigidBody"""
5659  return _IMP_core.RigidBodyMember_get_rigid_body(self)
5660 
5661  def get_internal_coordinates(self):
5662  """get_internal_coordinates(RigidBodyMember self) -> Vector3D"""
5663  return _IMP_core.RigidBodyMember_get_internal_coordinates(self)
5664 
5665  def set_internal_coordinates(self, *args):
5666  """set_internal_coordinates(RigidBodyMember self, Vector3D v)"""
5667  return _IMP_core.RigidBodyMember_set_internal_coordinates(self, *args)
5668 
5669  def set_internal_transformation(self, *args):
5670  """set_internal_transformation(RigidBodyMember self, Transformation3D v)"""
5671  return _IMP_core.RigidBodyMember_set_internal_transformation(self, *args)
5672 
5673  def get_internal_transformation(self):
5674  """get_internal_transformation(RigidBodyMember self) -> Transformation3D"""
5675  return _IMP_core.RigidBodyMember_get_internal_transformation(self)
5676 
5677  __swig_destroy__ = _IMP_core.delete_RigidBodyMember
5678  __del__ = lambda self : None;
5679  def set_coordinates(self, *args):
5680  """
5681  set_coordinates(RigidBodyMember self, Vector3D center)
5682  set_coordinates(RigidBodyMember self, Transformation3D tr)
5683  """
5684  return _IMP_core.RigidBodyMember_set_coordinates(self, *args)
5685 
5686  def get_is_setup(*args):
5687  """
5688  get_is_setup(_ParticleAdaptor p) -> bool
5689  get_is_setup(Model m, _ParticleIndexAdaptor p) -> bool
5690  """
5691  return _IMP_core.RigidBodyMember_get_is_setup(*args)
5692 
5693  if _newclass:get_is_setup = staticmethod(get_is_setup)
5694  __swig_getmethods__["get_is_setup"] = lambda x: get_is_setup
5695  def get_internal_coordinate_keys():
5696  """get_internal_coordinate_keys() -> IMP::kernel::FloatKeys"""
5697  return _IMP_core.RigidBodyMember_get_internal_coordinate_keys()
5698 
5699  if _newclass:get_internal_coordinate_keys = staticmethod(get_internal_coordinate_keys)
5700  __swig_getmethods__["get_internal_coordinate_keys"] = lambda x: get_internal_coordinate_keys
5701  def add_attribute(self, *args):
5702  """
5703  add_attribute(RigidBodyMember self, FloatKey k, IMP::Float v, bool opt)
5704  add_attribute(RigidBodyMember self, FloatKey a0, IMP::Float a1)
5705  add_attribute(RigidBodyMember self, IntKey a0, IMP::Int a1)
5706  add_attribute(RigidBodyMember self, StringKey a0, IMP::String a1)
5707  add_attribute(RigidBodyMember self, ParticleIndexKey a0, Particle a1)
5708  add_attribute(RigidBodyMember self, ObjectKey a0, Object a1)
5709  """
5710  return _IMP_core.RigidBodyMember_add_attribute(self, *args)
5711 
5712  def get_value(self, *args):
5713  """
5714  get_value(RigidBodyMember self, FloatKey a0) -> IMP::Float
5715  get_value(RigidBodyMember self, IntKey a0) -> IMP::Int
5716  get_value(RigidBodyMember self, StringKey a0) -> IMP::String
5717  get_value(RigidBodyMember self, ParticleIndexKey a0) -> Particle
5718  get_value(RigidBodyMember self, ObjectKey a0) -> Object
5719  """
5720  return _IMP_core.RigidBodyMember_get_value(self, *args)
5721 
5722  def set_value(self, *args):
5723  """
5724  set_value(RigidBodyMember self, FloatKey a0, IMP::Float a1)
5725  set_value(RigidBodyMember self, IntKey a0, IMP::Int a1)
5726  set_value(RigidBodyMember self, StringKey a0, IMP::String a1)
5727  set_value(RigidBodyMember self, ParticleIndexKey a0, Particle a1)
5728  set_value(RigidBodyMember self, ObjectKey a0, Object a1)
5729  """
5730  return _IMP_core.RigidBodyMember_set_value(self, *args)
5731 
5732  def remove_attribute(self, *args):
5733  """
5734  remove_attribute(RigidBodyMember self, FloatKey a0)
5735  remove_attribute(RigidBodyMember self, IntKey a0)
5736  remove_attribute(RigidBodyMember self, StringKey a0)
5737  remove_attribute(RigidBodyMember self, ParticleIndexKey a0)
5738  remove_attribute(RigidBodyMember self, ObjectKey a0)
5739  """
5740  return _IMP_core.RigidBodyMember_remove_attribute(self, *args)
5741 
5742  def has_attribute(self, *args):
5743  """
5744  has_attribute(RigidBodyMember self, FloatKey a0) -> bool
5745  has_attribute(RigidBodyMember self, IntKey a0) -> bool
5746  has_attribute(RigidBodyMember self, StringKey a0) -> bool
5747  has_attribute(RigidBodyMember self, ParticleIndexKey a0) -> bool
5748  has_attribute(RigidBodyMember self, ObjectKey a0) -> bool
5749  """
5750  return _IMP_core.RigidBodyMember_has_attribute(self, *args)
5751 
5752  def get_derivative(self, *args):
5753  """get_derivative(RigidBodyMember self, FloatKey a0) -> double"""
5754  return _IMP_core.RigidBodyMember_get_derivative(self, *args)
5755 
5756  def get_name(self):
5757  """get_name(RigidBodyMember self) -> std::string"""
5758  return _IMP_core.RigidBodyMember_get_name(self)
5759 
5760  def clear_caches(self):
5761  """clear_caches(RigidBodyMember self)"""
5762  return _IMP_core.RigidBodyMember_clear_caches(self)
5763 
5764  def set_name(self, *args):
5765  """set_name(RigidBodyMember self, std::string a0)"""
5766  return _IMP_core.RigidBodyMember_set_name(self, *args)
5767 
5768  def set_check_level(self, *args):
5769  """set_check_level(RigidBodyMember self, IMP::base::CheckLevel a0)"""
5770  return _IMP_core.RigidBodyMember_set_check_level(self, *args)
5771 
5772  def add_to_derivative(self, *args):
5773  """add_to_derivative(RigidBodyMember self, FloatKey a0, double a1, DerivativeAccumulator a2)"""
5774  return _IMP_core.RigidBodyMember_add_to_derivative(self, *args)
5775 
5776  def set_is_optimized(self, *args):
5777  """set_is_optimized(RigidBodyMember self, FloatKey a0, bool a1)"""
5778  return _IMP_core.RigidBodyMember_set_is_optimized(self, *args)
5779 
5780  def get_is_optimized(self, *args):
5781  """get_is_optimized(RigidBodyMember self, FloatKey a0) -> bool"""
5782  return _IMP_core.RigidBodyMember_get_is_optimized(self, *args)
5783 
5784  def get_check_level(self):
5785  """get_check_level(RigidBodyMember self) -> IMP::base::CheckLevel"""
5786  return _IMP_core.RigidBodyMember_get_check_level(self)
5787 
5788  def __eq__(self, *args):
5789  """
5790  __eq__(RigidBodyMember self, RigidBodyMember o) -> bool
5791  __eq__(RigidBodyMember self, Particle d) -> bool
5792  """
5793  return _IMP_core.RigidBodyMember___eq__(self, *args)
5794 
5795  def __ne__(self, *args):
5796  """
5797  __ne__(RigidBodyMember self, RigidBodyMember o) -> bool
5798  __ne__(RigidBodyMember self, Particle d) -> bool
5799  """
5800  return _IMP_core.RigidBodyMember___ne__(self, *args)
5801 
5802  def __le__(self, *args):
5803  """
5804  __le__(RigidBodyMember self, RigidBodyMember o) -> bool
5805  __le__(RigidBodyMember self, Particle d) -> bool
5806  """
5807  return _IMP_core.RigidBodyMember___le__(self, *args)
5808 
5809  def __lt__(self, *args):
5810  """
5811  __lt__(RigidBodyMember self, RigidBodyMember o) -> bool
5812  __lt__(RigidBodyMember self, Particle d) -> bool
5813  """
5814  return _IMP_core.RigidBodyMember___lt__(self, *args)
5815 
5816  def __ge__(self, *args):
5817  """
5818  __ge__(RigidBodyMember self, RigidBodyMember o) -> bool
5819  __ge__(RigidBodyMember self, Particle d) -> bool
5820  """
5821  return _IMP_core.RigidBodyMember___ge__(self, *args)
5822 
5823  def __gt__(self, *args):
5824  """
5825  __gt__(RigidBodyMember self, RigidBodyMember o) -> bool
5826  __gt__(RigidBodyMember self, Particle d) -> bool
5827  """
5828  return _IMP_core.RigidBodyMember___gt__(self, *args)
5829 
5830  def __str__(self):
5831  """__str__(RigidBodyMember self) -> std::string"""
5832  return _IMP_core.RigidBodyMember___str__(self)
5833 
5834  def __repr__(self):
5835  """__repr__(RigidBodyMember self) -> std::string"""
5836  return _IMP_core.RigidBodyMember___repr__(self)
5837 
5838 RigidBodyMember_swigregister = _IMP_core.RigidBodyMember_swigregister
5839 RigidBodyMember_swigregister(RigidBodyMember)
5840 
5841 def RigidBodyMember_get_is_setup(*args):
5842  """
5843  get_is_setup(_ParticleAdaptor p) -> bool
5844  RigidBodyMember_get_is_setup(Model m, _ParticleIndexAdaptor p) -> bool
5845  """
5846  return _IMP_core.RigidBodyMember_get_is_setup(*args)
5847 
5848 def RigidBodyMember_get_internal_coordinate_keys():
5849  """RigidBodyMember_get_internal_coordinate_keys() -> IMP::kernel::FloatKeys"""
5850  return _IMP_core.RigidBodyMember_get_internal_coordinate_keys()
5851 
5852 class RigidMember(RigidBodyMember):
5853  """Proxy of C++ IMP::core::RigidMember class"""
5854  __swig_setmethods__ = {}
5855  for _s in [RigidBodyMember]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
5856  __setattr__ = lambda self, name, value: _swig_setattr(self, RigidMember, name, value)
5857  __swig_getmethods__ = {}
5858  for _s in [RigidBodyMember]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
5859  __getattr__ = lambda self, name: _swig_getattr(self, RigidMember, name)
5860  def __init__(self, *args):
5861  """
5862  __init__(IMP::core::RigidMember self) -> RigidMember
5863  __init__(IMP::core::RigidMember self, Model m, ::IMP::kernel::ParticleIndex id) -> RigidMember
5864  __init__(IMP::core::RigidMember self, _ParticleAdaptor d) -> RigidMember
5865  """
5866  this = _IMP_core.new_RigidMember(*args)
5867  try: self.this.append(this)
5868  except: self.this = this
5869  def show(self, *args):
5870  """
5871  show(RigidMember self, _ostream out=std::cout)
5872  show(RigidMember self)
5873  """
5874  return _IMP_core.RigidMember_show(self, *args)
5875 
5876  __swig_destroy__ = _IMP_core.delete_RigidMember
5877  __del__ = lambda self : None;
5878  def get_is_setup(*args):
5879  """
5880  get_is_setup(_ParticleAdaptor p) -> bool
5881  get_is_setup(Model m, _ParticleIndexAdaptor p) -> bool
5882  """
5883  return _IMP_core.RigidMember_get_is_setup(*args)
5884 
5885  if _newclass:get_is_setup = staticmethod(get_is_setup)
5886  __swig_getmethods__["get_is_setup"] = lambda x: get_is_setup
5887  def add_attribute(self, *args):
5888  """
5889  add_attribute(RigidMember self, FloatKey k, IMP::Float v, bool opt)
5890  add_attribute(RigidMember self, FloatKey a0, IMP::Float a1)
5891  add_attribute(RigidMember self, IntKey a0, IMP::Int a1)
5892  add_attribute(RigidMember self, StringKey a0, IMP::String a1)
5893  add_attribute(RigidMember self, ParticleIndexKey a0, Particle a1)
5894  add_attribute(RigidMember self, ObjectKey a0, Object a1)
5895  """
5896  return _IMP_core.RigidMember_add_attribute(self, *args)
5897 
5898  def get_value(self, *args):
5899  """
5900  get_value(RigidMember self, FloatKey a0) -> IMP::Float
5901  get_value(RigidMember self, IntKey a0) -> IMP::Int
5902  get_value(RigidMember self, StringKey a0) -> IMP::String
5903  get_value(RigidMember self, ParticleIndexKey a0) -> Particle
5904  get_value(RigidMember self, ObjectKey a0) -> Object
5905  """
5906  return _IMP_core.RigidMember_get_value(self, *args)
5907 
5908  def set_value(self, *args):
5909  """
5910  set_value(RigidMember self, FloatKey a0, IMP::Float a1)
5911  set_value(RigidMember self, IntKey a0, IMP::Int a1)
5912  set_value(RigidMember self, StringKey a0, IMP::String a1)
5913  set_value(RigidMember self, ParticleIndexKey a0, Particle a1)
5914  set_value(RigidMember self, ObjectKey a0, Object a1)
5915  """
5916  return _IMP_core.RigidMember_set_value(self, *args)
5917 
5918  def remove_attribute(self, *args):
5919  """
5920  remove_attribute(RigidMember self, FloatKey a0)
5921  remove_attribute(RigidMember self, IntKey a0)
5922  remove_attribute(RigidMember self, StringKey a0)
5923  remove_attribute(RigidMember self, ParticleIndexKey a0)
5924  remove_attribute(RigidMember self, ObjectKey a0)
5925  """
5926  return _IMP_core.RigidMember_remove_attribute(self, *args)
5927 
5928  def has_attribute(self, *args):
5929  """
5930  has_attribute(RigidMember self, FloatKey a0) -> bool
5931  has_attribute(RigidMember self, IntKey a0) -> bool
5932  has_attribute(RigidMember self, StringKey a0) -> bool
5933  has_attribute(RigidMember self, ParticleIndexKey a0) -> bool
5934  has_attribute(RigidMember self, ObjectKey a0) -> bool
5935  """
5936  return _IMP_core.RigidMember_has_attribute(self, *args)
5937 
5938  def get_derivative(self, *args):
5939  """get_derivative(RigidMember self, FloatKey a0) -> double"""
5940  return _IMP_core.RigidMember_get_derivative(self, *args)
5941 
5942  def get_name(self):
5943  """get_name(RigidMember self) -> std::string"""
5944  return _IMP_core.RigidMember_get_name(self)
5945 
5946  def clear_caches(self):
5947  """clear_caches(RigidMember self)"""
5948  return _IMP_core.RigidMember_clear_caches(self)
5949 
5950  def set_name(self, *args):
5951  """set_name(RigidMember self, std::string a0)"""
5952  return _IMP_core.RigidMember_set_name(self, *args)
5953 
5954  def set_check_level(self, *args):
5955  """set_check_level(RigidMember self, IMP::base::CheckLevel a0)"""
5956  return _IMP_core.RigidMember_set_check_level(self, *args)
5957 
5958  def add_to_derivative(self, *args):
5959  """add_to_derivative(RigidMember self, FloatKey a0, double a1, DerivativeAccumulator a2)"""
5960  return _IMP_core.RigidMember_add_to_derivative(self, *args)
5961 
5962  def set_is_optimized(self, *args):
5963  """set_is_optimized(RigidMember self, FloatKey a0, bool a1)"""
5964  return _IMP_core.RigidMember_set_is_optimized(self, *args)
5965 
5966  def get_is_optimized(self, *args):
5967  """get_is_optimized(RigidMember self, FloatKey a0) -> bool"""
5968  return _IMP_core.RigidMember_get_is_optimized(self, *args)
5969 
5970  def get_check_level(self):
5971  """get_check_level(RigidMember self) -> IMP::base::CheckLevel"""
5972  return _IMP_core.RigidMember_get_check_level(self)
5973 
5974  def __eq__(self, *args):
5975  """
5976  __eq__(RigidMember self, RigidMember o) -> bool
5977  __eq__(RigidMember self, Particle d) -> bool
5978  """
5979  return _IMP_core.RigidMember___eq__(self, *args)
5980 
5981  def __ne__(self, *args):
5982  """
5983  __ne__(RigidMember self, RigidMember o) -> bool
5984  __ne__(RigidMember self, Particle d) -> bool
5985  """
5986  return _IMP_core.RigidMember___ne__(self, *args)
5987 
5988  def __le__(self, *args):
5989  """
5990  __le__(RigidMember self, RigidMember o) -> bool
5991  __le__(RigidMember self, Particle d) -> bool
5992  """
5993  return _IMP_core.RigidMember___le__(self, *args)
5994 
5995  def __lt__(self, *args):
5996  """
5997  __lt__(RigidMember self, RigidMember o) -> bool
5998  __lt__(RigidMember self, Particle d) -> bool
5999  """
6000  return _IMP_core.RigidMember___lt__(self, *args)
6001 
6002  def __ge__(self, *args):
6003  """
6004  __ge__(RigidMember self, RigidMember o) -> bool
6005  __ge__(RigidMember self, Particle d) -> bool
6006  """
6007  return _IMP_core.RigidMember___ge__(self, *args)
6008 
6009  def __gt__(self, *args):
6010  """
6011  __gt__(RigidMember self, RigidMember o) -> bool
6012  __gt__(RigidMember self, Particle d) -> bool
6013  """
6014  return _IMP_core.RigidMember___gt__(self, *args)
6015 
6016  def __str__(self):
6017  """__str__(RigidMember self) -> std::string"""
6018  return _IMP_core.RigidMember___str__(self)
6019 
6020  def __repr__(self):
6021  """__repr__(RigidMember self) -> std::string"""
6022  return _IMP_core.RigidMember___repr__(self)
6023 
6024 RigidMember_swigregister = _IMP_core.RigidMember_swigregister
6025 RigidMember_swigregister(RigidMember)
6026 
6027 def RigidMember_get_is_setup(*args):
6028  """
6029  get_is_setup(_ParticleAdaptor p) -> bool
6030  RigidMember_get_is_setup(Model m, _ParticleIndexAdaptor p) -> bool
6031  """
6032  return _IMP_core.RigidMember_get_is_setup(*args)
6033 
6034 class NonRigidMember(RigidBodyMember):
6035  """Proxy of C++ IMP::core::NonRigidMember class"""
6036  __swig_setmethods__ = {}
6037  for _s in [RigidBodyMember]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
6038  __setattr__ = lambda self, name, value: _swig_setattr(self, NonRigidMember, name, value)
6039  __swig_getmethods__ = {}
6040  for _s in [RigidBodyMember]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
6041  __getattr__ = lambda self, name: _swig_getattr(self, NonRigidMember, name)
6042  def __init__(self, *args):
6043  """
6044  __init__(IMP::core::NonRigidMember self) -> NonRigidMember
6045  __init__(IMP::core::NonRigidMember self, Model m, ::IMP::kernel::ParticleIndex id) -> NonRigidMember
6046  __init__(IMP::core::NonRigidMember self, _ParticleAdaptor d) -> NonRigidMember
6047  """
6048  this = _IMP_core.new_NonRigidMember(*args)
6049  try: self.this.append(this)
6050  except: self.this = this
6051  def show(self, *args):
6052  """
6053  show(NonRigidMember self, _ostream out=std::cout)
6054  show(NonRigidMember self)
6055  """
6056  return _IMP_core.NonRigidMember_show(self, *args)
6057 
6058  __swig_destroy__ = _IMP_core.delete_NonRigidMember
6059  __del__ = lambda self : None;
6060  def get_is_setup(*args):
6061  """
6062  get_is_setup(_ParticleAdaptor p) -> bool
6063  get_is_setup(Model m, IMP::kernel::ParticleIndex p) -> bool
6064  """
6065  return _IMP_core.NonRigidMember_get_is_setup(*args)
6066 
6067  if _newclass:get_is_setup = staticmethod(get_is_setup)
6068  __swig_getmethods__["get_is_setup"] = lambda x: get_is_setup
6069  def add_attribute(self, *args):
6070  """
6071  add_attribute(NonRigidMember self, FloatKey k, IMP::Float v, bool opt)
6072  add_attribute(NonRigidMember self, FloatKey a0, IMP::Float a1)
6073  add_attribute(NonRigidMember self, IntKey a0, IMP::Int a1)
6074  add_attribute(NonRigidMember self, StringKey a0, IMP::String a1)
6075  add_attribute(NonRigidMember self, ParticleIndexKey a0, Particle a1)
6076  add_attribute(NonRigidMember self, ObjectKey a0, Object a1)
6077  """
6078  return _IMP_core.NonRigidMember_add_attribute(self, *args)
6079 
6080  def get_value(self, *args):
6081  """
6082  get_value(NonRigidMember self, FloatKey a0) -> IMP::Float
6083  get_value(NonRigidMember self, IntKey a0) -> IMP::Int
6084  get_value(NonRigidMember self, StringKey a0) -> IMP::String
6085  get_value(NonRigidMember self, ParticleIndexKey a0) -> Particle
6086  get_value(NonRigidMember self, ObjectKey a0) -> Object
6087  """
6088  return _IMP_core.NonRigidMember_get_value(self, *args)
6089 
6090  def set_value(self, *args):
6091  """
6092  set_value(NonRigidMember self, FloatKey a0, IMP::Float a1)
6093  set_value(NonRigidMember self, IntKey a0, IMP::Int a1)
6094  set_value(NonRigidMember self, StringKey a0, IMP::String a1)
6095  set_value(NonRigidMember self, ParticleIndexKey a0, Particle a1)
6096  set_value(NonRigidMember self, ObjectKey a0, Object a1)
6097  """
6098  return _IMP_core.NonRigidMember_set_value(self, *args)
6099 
6100  def remove_attribute(self, *args):
6101  """
6102  remove_attribute(NonRigidMember self, FloatKey a0)
6103  remove_attribute(NonRigidMember self, IntKey a0)
6104  remove_attribute(NonRigidMember self, StringKey a0)
6105  remove_attribute(NonRigidMember self, ParticleIndexKey a0)
6106  remove_attribute(NonRigidMember self, ObjectKey a0)
6107  """
6108  return _IMP_core.NonRigidMember_remove_attribute(self, *args)
6109 
6110  def has_attribute(self, *args):
6111  """
6112  has_attribute(NonRigidMember self, FloatKey a0) -> bool
6113  has_attribute(NonRigidMember self, IntKey a0) -> bool
6114  has_attribute(NonRigidMember self, StringKey a0) -> bool
6115  has_attribute(NonRigidMember self, ParticleIndexKey a0) -> bool
6116  has_attribute(NonRigidMember self, ObjectKey a0) -> bool
6117  """
6118  return _IMP_core.NonRigidMember_has_attribute(self, *args)
6119 
6120  def get_derivative(self, *args):
6121  """get_derivative(NonRigidMember self, FloatKey a0) -> double"""
6122  return _IMP_core.NonRigidMember_get_derivative(self, *args)
6123 
6124  def get_name(self):
6125  """get_name(NonRigidMember self) -> std::string"""
6126  return _IMP_core.NonRigidMember_get_name(self)
6127 
6128  def clear_caches(self):
6129  """clear_caches(NonRigidMember self)"""
6130  return _IMP_core.NonRigidMember_clear_caches(self)
6131 
6132  def set_name(self, *args):
6133  """set_name(NonRigidMember self, std::string a0)"""
6134  return _IMP_core.NonRigidMember_set_name(self, *args)
6135 
6136  def set_check_level(self, *args):
6137  """set_check_level(NonRigidMember self, IMP::base::CheckLevel a0)"""
6138  return _IMP_core.NonRigidMember_set_check_level(self, *args)
6139 
6140  def add_to_derivative(self, *args):
6141  """add_to_derivative(NonRigidMember self, FloatKey a0, double a1, DerivativeAccumulator a2)"""
6142  return _IMP_core.NonRigidMember_add_to_derivative(self, *args)
6143 
6144  def set_is_optimized(self, *args):
6145  """set_is_optimized(NonRigidMember self, FloatKey a0, bool a1)"""
6146  return _IMP_core.NonRigidMember_set_is_optimized(self, *args)
6147 
6148  def get_is_optimized(self, *args):
6149  """get_is_optimized(NonRigidMember self, FloatKey a0) -> bool"""
6150  return _IMP_core.NonRigidMember_get_is_optimized(self, *args)
6151 
6152  def get_check_level(self):
6153  """get_check_level(NonRigidMember self) -> IMP::base::CheckLevel"""
6154  return _IMP_core.NonRigidMember_get_check_level(self)
6155 
6156  def __eq__(self, *args):
6157  """
6158  __eq__(NonRigidMember self, NonRigidMember o) -> bool
6159  __eq__(NonRigidMember self, Particle d) -> bool
6160  """
6161  return _IMP_core.NonRigidMember___eq__(self, *args)
6162 
6163  def __ne__(self, *args):
6164  """
6165  __ne__(NonRigidMember self, NonRigidMember o) -> bool
6166  __ne__(NonRigidMember self, Particle d) -> bool
6167  """
6168  return _IMP_core.NonRigidMember___ne__(self, *args)
6169 
6170  def __le__(self, *args):
6171  """
6172  __le__(NonRigidMember self, NonRigidMember o) -> bool
6173  __le__(NonRigidMember self, Particle d) -> bool
6174  """
6175  return _IMP_core.NonRigidMember___le__(self, *args)
6176 
6177  def __lt__(self, *args):
6178  """
6179  __lt__(NonRigidMember self, NonRigidMember o) -> bool
6180  __lt__(NonRigidMember self, Particle d) -> bool
6181  """
6182  return _IMP_core.NonRigidMember___lt__(self, *args)
6183 
6184  def __ge__(self, *args):
6185  """
6186  __ge__(NonRigidMember self, NonRigidMember o) -> bool
6187  __ge__(NonRigidMember self, Particle d) -> bool
6188  """
6189  return _IMP_core.NonRigidMember___ge__(self, *args)
6190 
6191  def __gt__(self, *args):
6192  """
6193  __gt__(NonRigidMember self, NonRigidMember o) -> bool
6194  __gt__(NonRigidMember self, Particle d) -> bool
6195  """
6196  return _IMP_core.NonRigidMember___gt__(self, *args)
6197 
6198  def __str__(self):
6199  """__str__(NonRigidMember self) -> std::string"""
6200  return _IMP_core.NonRigidMember___str__(self)
6201 
6202  def __repr__(self):
6203  """__repr__(NonRigidMember self) -> std::string"""
6204  return _IMP_core.NonRigidMember___repr__(self)
6205 
6206 NonRigidMember_swigregister = _IMP_core.NonRigidMember_swigregister
6207 NonRigidMember_swigregister(NonRigidMember)
6208 
6209 def NonRigidMember_get_is_setup(*args):
6210  """
6211  get_is_setup(_ParticleAdaptor p) -> bool
6212  NonRigidMember_get_is_setup(Model m, IMP::kernel::ParticleIndex p) -> bool
6213  """
6214  return _IMP_core.NonRigidMember_get_is_setup(*args)
6215 
6216 class RigidMembersRefiner(IMP.kernel.Refiner):
6217  """Proxy of C++ IMP::core::RigidMembersRefiner class"""
6218  __swig_setmethods__ = {}
6219  for _s in [IMP.kernel.Refiner]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
6220  __setattr__ = lambda self, name, value: _swig_setattr(self, RigidMembersRefiner, name, value)
6221  __swig_getmethods__ = {}
6222  for _s in [IMP.kernel.Refiner]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
6223  __getattr__ = lambda self, name: _swig_getattr(self, RigidMembersRefiner, name)
6224  def __init__(self, name="RigidMembersRefiner%d"):
6225  """
6226  __init__(IMP::core::RigidMembersRefiner self, std::string name="RigidMembersRefiner%d") -> RigidMembersRefiner
6227  __init__(IMP::core::RigidMembersRefiner self) -> RigidMembersRefiner
6228  """
6229  this = _IMP_core.new_RigidMembersRefiner(name)
6230  try: self.this.append(this)
6231  except: self.this = this
6232  def do_get_inputs(self, *args):
6233  """do_get_inputs(RigidMembersRefiner self, Model m, IMP::kernel::ParticleIndexes const & pis) -> IMP::kernel::ModelObjectsTemp"""
6234  return _IMP_core.RigidMembersRefiner_do_get_inputs(self, *args)
6235 
6236  def get_version_info(self):
6237  """get_version_info(RigidMembersRefiner self) -> VersionInfo"""
6238  return _IMP_core.RigidMembersRefiner_get_version_info(self)
6239 
6240  def __str__(self):
6241  """__str__(RigidMembersRefiner self) -> std::string"""
6242  return _IMP_core.RigidMembersRefiner___str__(self)
6243 
6244  def __repr__(self):
6245  """__repr__(RigidMembersRefiner self) -> std::string"""
6246  return _IMP_core.RigidMembersRefiner___repr__(self)
6247 
6248  def get_from(o):
6249  return _object_cast_to_RigidMembersRefiner(o)
6250  get_from = staticmethod(get_from)
6251 
6252 RigidMembersRefiner_swigregister = _IMP_core.RigidMembersRefiner_swigregister
6253 RigidMembersRefiner_swigregister(RigidMembersRefiner)
6254 
6255 
6256 def get_rigid_members_refiner():
6257  """get_rigid_members_refiner() -> RigidMembersRefiner"""
6258  return _IMP_core.get_rigid_members_refiner()
6259 
6260 def transform(*args):
6261  """
6262  transform(XYZ a, Transformation3D tr)
6263  transform(RigidBody a, Transformation3D tr)
6264  """
6265  return _IMP_core.transform(*args)
6266 
6267 def get_initial_reference_frame(*args):
6268  """
6269  get_initial_reference_frame(Model m, IMP::kernel::ParticleIndexes const & pis) -> ReferenceFrame3D
6270  get_initial_reference_frame(IMP::kernel::ParticlesTemp const & ps) -> ReferenceFrame3D
6271  """
6272  return _IMP_core.get_initial_reference_frame(*args)
6273 
6274 def create_rigid_bodies(*args):
6275  """
6276  create_rigid_bodies(Model m, unsigned int n, bool no_members=False) -> IMP::kernel::ParticlesTemp
6277  create_rigid_bodies(Model m, unsigned int n) -> IMP::kernel::ParticlesTemp
6278  """
6279  return _IMP_core.create_rigid_bodies(*args)
6280 
6281 def show_rigid_body_hierarchy(*args):
6282  """
6283  show_rigid_body_hierarchy(RigidBody rb, TextOutput out=IMP::base::TextOutput(std::cout))
6284  show_rigid_body_hierarchy(RigidBody rb)
6285  """
6286  return _IMP_core.show_rigid_body_hierarchy(*args)
6287 
6288 def get_root_rigid_body(*args):
6289  """get_root_rigid_body(RigidMember m) -> IMP::kernel::ParticleIndex"""
6290  return _IMP_core.get_root_rigid_body(*args)
6291 class RigidBodyHierarchyGeometry(IMP.display.SingletonGeometry):
6292  """Proxy of C++ IMP::core::RigidBodyHierarchyGeometry class"""
6293  __swig_setmethods__ = {}
6294  for _s in [IMP.display.SingletonGeometry]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
6295  __setattr__ = lambda self, name, value: _swig_setattr(self, RigidBodyHierarchyGeometry, name, value)
6296  __swig_getmethods__ = {}
6297  for _s in [IMP.display.SingletonGeometry]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
6298  __getattr__ = lambda self, name: _swig_getattr(self, RigidBodyHierarchyGeometry, name)
6299  def __init__(self, *args):
6300  """__init__(IMP::core::RigidBodyHierarchyGeometry self, RigidBody rb, IMP::kernel::ParticlesTemp const & constituents) -> RigidBodyHierarchyGeometry"""
6301  this = _IMP_core.new_RigidBodyHierarchyGeometry(*args)
6302  try: self.this.append(this)
6303  except: self.this = this
6304  def get_version_info(self):
6305  """get_version_info(RigidBodyHierarchyGeometry self) -> VersionInfo"""
6306  return _IMP_core.RigidBodyHierarchyGeometry_get_version_info(self)
6307 
6308  def __str__(self):
6309  """__str__(RigidBodyHierarchyGeometry self) -> std::string"""
6310  return _IMP_core.RigidBodyHierarchyGeometry___str__(self)
6311 
6312  def __repr__(self):
6313  """__repr__(RigidBodyHierarchyGeometry self) -> std::string"""
6314  return _IMP_core.RigidBodyHierarchyGeometry___repr__(self)
6315 
6316  def get_from(o):
6317  return _object_cast_to_RigidBodyHierarchyGeometry(o)
6318  get_from = staticmethod(get_from)
6319 
6320 RigidBodyHierarchyGeometry_swigregister = _IMP_core.RigidBodyHierarchyGeometry_swigregister
6321 RigidBodyHierarchyGeometry_swigregister(RigidBodyHierarchyGeometry)
6322 
6323 class RigidBodyDerivativeGeometry(IMP.display.SingletonGeometry):
6324  """Proxy of C++ IMP::core::RigidBodyDerivativeGeometry class"""
6325  __swig_setmethods__ = {}
6326  for _s in [IMP.display.SingletonGeometry]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
6327  __setattr__ = lambda self, name, value: _swig_setattr(self, RigidBodyDerivativeGeometry, name, value)
6328  __swig_getmethods__ = {}
6329  for _s in [IMP.display.SingletonGeometry]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
6330  __getattr__ = lambda self, name: _swig_getattr(self, RigidBodyDerivativeGeometry, name)
6331  def __init__(self, *args):
6332  """
6333  __init__(IMP::core::RigidBodyDerivativeGeometry self, Particle p) -> RigidBodyDerivativeGeometry
6334  __init__(IMP::core::RigidBodyDerivativeGeometry self, RigidBody d) -> RigidBodyDerivativeGeometry
6335  """
6336  this = _IMP_core.new_RigidBodyDerivativeGeometry(*args)
6337  try: self.this.append(this)
6338  except: self.this = this
6339  def get_version_info(self):
6340  """get_version_info(RigidBodyDerivativeGeometry self) -> VersionInfo"""
6341  return _IMP_core.RigidBodyDerivativeGeometry_get_version_info(self)
6342 
6343  def __str__(self):
6344  """__str__(RigidBodyDerivativeGeometry self) -> std::string"""
6345  return _IMP_core.RigidBodyDerivativeGeometry___str__(self)
6346 
6347  def __repr__(self):
6348  """__repr__(RigidBodyDerivativeGeometry self) -> std::string"""
6349  return _IMP_core.RigidBodyDerivativeGeometry___repr__(self)
6350 
6351  def get_from(o):
6352  return _object_cast_to_RigidBodyDerivativeGeometry(o)
6353  get_from = staticmethod(get_from)
6354 
6355 RigidBodyDerivativeGeometry_swigregister = _IMP_core.RigidBodyDerivativeGeometry_swigregister
6356 RigidBodyDerivativeGeometry_swigregister(RigidBodyDerivativeGeometry)
6357 
6358 class RigidBodyDerivativesGeometry(IMP.display.SingletonsGeometry):
6359  """Proxy of C++ IMP::core::RigidBodyDerivativesGeometry class"""
6360  __swig_setmethods__ = {}
6361  for _s in [IMP.display.SingletonsGeometry]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
6362  __setattr__ = lambda self, name, value: _swig_setattr(self, RigidBodyDerivativesGeometry, name, value)
6363  __swig_getmethods__ = {}
6364  for _s in [IMP.display.SingletonsGeometry]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
6365  __getattr__ = lambda self, name: _swig_getattr(self, RigidBodyDerivativesGeometry, name)
6366  def __init__(self, *args):
6367  """__init__(IMP::core::RigidBodyDerivativesGeometry self, SingletonContainer sc) -> RigidBodyDerivativesGeometry"""
6368  this = _IMP_core.new_RigidBodyDerivativesGeometry(*args)
6369  try: self.this.append(this)
6370  except: self.this = this
6371  def get_version_info(self):
6372  """get_version_info(RigidBodyDerivativesGeometry self) -> VersionInfo"""
6373  return _IMP_core.RigidBodyDerivativesGeometry_get_version_info(self)
6374 
6375  def __str__(self):
6376  """__str__(RigidBodyDerivativesGeometry self) -> std::string"""
6377  return _IMP_core.RigidBodyDerivativesGeometry___str__(self)
6378 
6379  def __repr__(self):
6380  """__repr__(RigidBodyDerivativesGeometry self) -> std::string"""
6381  return _IMP_core.RigidBodyDerivativesGeometry___repr__(self)
6382 
6383  def get_from(o):
6384  return _object_cast_to_RigidBodyDerivativesGeometry(o)
6385  get_from = staticmethod(get_from)
6386 
6387 RigidBodyDerivativesGeometry_swigregister = _IMP_core.RigidBodyDerivativesGeometry_swigregister
6388 RigidBodyDerivativesGeometry_swigregister(RigidBodyDerivativesGeometry)
6389 
6390 class RigidBodyFrameGeometry(IMP.display.SingletonGeometry):
6391  """Proxy of C++ IMP::core::RigidBodyFrameGeometry class"""
6392  __swig_setmethods__ = {}
6393  for _s in [IMP.display.SingletonGeometry]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
6394  __setattr__ = lambda self, name, value: _swig_setattr(self, RigidBodyFrameGeometry, name, value)
6395  __swig_getmethods__ = {}
6396  for _s in [IMP.display.SingletonGeometry]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
6397  __getattr__ = lambda self, name: _swig_getattr(self, RigidBodyFrameGeometry, name)
6398  def __init__(self, *args):
6399  """
6400  __init__(IMP::core::RigidBodyFrameGeometry self, Particle p) -> RigidBodyFrameGeometry
6401  __init__(IMP::core::RigidBodyFrameGeometry self, RigidBody d) -> RigidBodyFrameGeometry
6402  """
6403  this = _IMP_core.new_RigidBodyFrameGeometry(*args)
6404  try: self.this.append(this)
6405  except: self.this = this
6406  def get_version_info(self):
6407  """get_version_info(RigidBodyFrameGeometry self) -> VersionInfo"""
6408  return _IMP_core.RigidBodyFrameGeometry_get_version_info(self)
6409 
6410  def __str__(self):
6411  """__str__(RigidBodyFrameGeometry self) -> std::string"""
6412  return _IMP_core.RigidBodyFrameGeometry___str__(self)
6413 
6414  def __repr__(self):
6415  """__repr__(RigidBodyFrameGeometry self) -> std::string"""
6416  return _IMP_core.RigidBodyFrameGeometry___repr__(self)
6417 
6418  def get_from(o):
6419  return _object_cast_to_RigidBodyFrameGeometry(o)
6420  get_from = staticmethod(get_from)
6421 
6422 RigidBodyFrameGeometry_swigregister = _IMP_core.RigidBodyFrameGeometry_swigregister
6423 RigidBodyFrameGeometry_swigregister(RigidBodyFrameGeometry)
6424 
6425 class RigidBodyFramesGeometry(IMP.display.SingletonsGeometry):
6426  """Proxy of C++ IMP::core::RigidBodyFramesGeometry class"""
6427  __swig_setmethods__ = {}
6428  for _s in [IMP.display.SingletonsGeometry]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
6429  __setattr__ = lambda self, name, value: _swig_setattr(self, RigidBodyFramesGeometry, name, value)
6430  __swig_getmethods__ = {}
6431  for _s in [IMP.display.SingletonsGeometry]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
6432  __getattr__ = lambda self, name: _swig_getattr(self, RigidBodyFramesGeometry, name)
6433  def __init__(self, *args):
6434  """__init__(IMP::core::RigidBodyFramesGeometry self, SingletonContainer sc) -> RigidBodyFramesGeometry"""
6435  this = _IMP_core.new_RigidBodyFramesGeometry(*args)
6436  try: self.this.append(this)
6437  except: self.this = this
6438  def get_version_info(self):
6439  """get_version_info(RigidBodyFramesGeometry self) -> VersionInfo"""
6440  return _IMP_core.RigidBodyFramesGeometry_get_version_info(self)
6441 
6442  def __str__(self):
6443  """__str__(RigidBodyFramesGeometry self) -> std::string"""
6444  return _IMP_core.RigidBodyFramesGeometry___str__(self)
6445 
6446  def __repr__(self):
6447  """__repr__(RigidBodyFramesGeometry self) -> std::string"""
6448  return _IMP_core.RigidBodyFramesGeometry___repr__(self)
6449 
6450  def get_from(o):
6451  return _object_cast_to_RigidBodyFramesGeometry(o)
6452  get_from = staticmethod(get_from)
6453 
6454 RigidBodyFramesGeometry_swigregister = _IMP_core.RigidBodyFramesGeometry_swigregister
6455 RigidBodyFramesGeometry_swigregister(RigidBodyFramesGeometry)
6456 
6457 class RigidBodyTorque(IMP.display.SegmentGeometry):
6458  """Proxy of C++ IMP::core::RigidBodyTorque class"""
6459  __swig_setmethods__ = {}
6460  for _s in [IMP.display.SegmentGeometry]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
6461  __setattr__ = lambda self, name, value: _swig_setattr(self, RigidBodyTorque, name, value)
6462  __swig_getmethods__ = {}
6463  for _s in [IMP.display.SegmentGeometry]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
6464  __getattr__ = lambda self, name: _swig_getattr(self, RigidBodyTorque, name)
6465  def __init__(self, *args):
6466  """__init__(IMP::core::RigidBodyTorque self, Particle p) -> RigidBodyTorque"""
6467  this = _IMP_core.new_RigidBodyTorque(*args)
6468  try: self.this.append(this)
6469  except: self.this = this
6470  def __str__(self):
6471  """__str__(RigidBodyTorque self) -> std::string"""
6472  return _IMP_core.RigidBodyTorque___str__(self)
6473 
6474  def __repr__(self):
6475  """__repr__(RigidBodyTorque self) -> std::string"""
6476  return _IMP_core.RigidBodyTorque___repr__(self)
6477 
6478  def get_from(o):
6479  return _object_cast_to_RigidBodyTorque(o)
6480  get_from = staticmethod(get_from)
6481 
6482  __swig_destroy__ = _IMP_core.delete_RigidBodyTorque
6483  __del__ = lambda self : None;
6484 RigidBodyTorque_swigregister = _IMP_core.RigidBodyTorque_swigregister
6485 RigidBodyTorque_swigregister(RigidBodyTorque)
6486 
6487 class NearestNeighborsClosePairsFinder(ClosePairsFinder):
6488  """Proxy of C++ IMP::core::NearestNeighborsClosePairsFinder class"""
6489  __swig_setmethods__ = {}
6490  for _s in [ClosePairsFinder]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
6491  __setattr__ = lambda self, name, value: _swig_setattr(self, NearestNeighborsClosePairsFinder, name, value)
6492  __swig_getmethods__ = {}
6493  for _s in [ClosePairsFinder]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
6494  __getattr__ = lambda self, name: _swig_getattr(self, NearestNeighborsClosePairsFinder, name)
6495  def __init__(self):
6496  """__init__(IMP::core::NearestNeighborsClosePairsFinder self) -> NearestNeighborsClosePairsFinder"""
6497  this = _IMP_core.new_NearestNeighborsClosePairsFinder()
6498  try: self.this.append(this)
6499  except: self.this = this
6500  def get_close_pairs(self, *args):
6501  """
6502  get_close_pairs(NearestNeighborsClosePairsFinder self, IMP::kernel::ParticlesTemp const & pc) -> IMP::kernel::ParticlePairsTemp
6503  get_close_pairs(NearestNeighborsClosePairsFinder self, IMP::kernel::ParticlesTemp const & pca, IMP::kernel::ParticlesTemp const & pcb) -> IMP::kernel::ParticlePairsTemp
6504  get_close_pairs(NearestNeighborsClosePairsFinder self, IMP::algebra::BoundingBox3Ds const & bbs) -> IMP::IntPairs
6505  get_close_pairs(NearestNeighborsClosePairsFinder self, IMP::algebra::BoundingBox3Ds const & bas, IMP::algebra::BoundingBox3Ds const & bbs) -> IMP::IntPairs
6506  get_close_pairs(NearestNeighborsClosePairsFinder self, Model m, IMP::kernel::ParticleIndexes const & pc) -> IMP::kernel::ParticleIndexPairs
6507  get_close_pairs(NearestNeighborsClosePairsFinder self, Model m, IMP::kernel::ParticleIndexes const & pca, IMP::kernel::ParticleIndexes const & pcb) -> IMP::kernel::ParticleIndexPairs
6508  """
6509  return _IMP_core.NearestNeighborsClosePairsFinder_get_close_pairs(self, *args)
6510 
6511  def do_get_inputs(self, *args):
6512  """do_get_inputs(NearestNeighborsClosePairsFinder self, Model m, IMP::kernel::ParticleIndexes const & pis) -> IMP::kernel::ModelObjectsTemp"""
6513  return _IMP_core.NearestNeighborsClosePairsFinder_do_get_inputs(self, *args)
6514 
6515  def get_version_info(self):
6516  """get_version_info(NearestNeighborsClosePairsFinder self) -> VersionInfo"""
6517  return _IMP_core.NearestNeighborsClosePairsFinder_get_version_info(self)
6518 
6519  def __str__(self):
6520  """__str__(NearestNeighborsClosePairsFinder self) -> std::string"""
6521  return _IMP_core.NearestNeighborsClosePairsFinder___str__(self)
6522 
6523  def __repr__(self):
6524  """__repr__(NearestNeighborsClosePairsFinder self) -> std::string"""
6525  return _IMP_core.NearestNeighborsClosePairsFinder___repr__(self)
6526 
6527  def get_from(o):
6528  return _object_cast_to_NearestNeighborsClosePairsFinder(o)
6529  get_from = staticmethod(get_from)
6530 
6531 NearestNeighborsClosePairsFinder_swigregister = _IMP_core.NearestNeighborsClosePairsFinder_swigregister
6532 NearestNeighborsClosePairsFinder_swigregister(NearestNeighborsClosePairsFinder)
6533 
6534 class RestraintsScoringFunction(IMP.kernel.ScoringFunction):
6535  """Proxy of C++ IMP::core::RestraintsScoringFunction class"""
6536  __swig_setmethods__ = {}
6537  for _s in [IMP.kernel.ScoringFunction]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
6538  __setattr__ = lambda self, name, value: _swig_setattr(self, RestraintsScoringFunction, name, value)
6539  __swig_getmethods__ = {}
6540  for _s in [IMP.kernel.ScoringFunction]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
6541  __getattr__ = lambda self, name: _swig_getattr(self, RestraintsScoringFunction, name)
6542  def __init__(self, *args):
6543  """
6544  __init__(IMP::core::RestraintsScoringFunction self, _RestraintsAdaptor rs, double weight=1.0, double max=NO_MAX, std::string name="RestraintsScoringFunction%1%") -> RestraintsScoringFunction
6545  __init__(IMP::core::RestraintsScoringFunction self, _RestraintsAdaptor rs, double weight=1.0, double max=NO_MAX) -> RestraintsScoringFunction
6546  __init__(IMP::core::RestraintsScoringFunction self, _RestraintsAdaptor rs, double weight=1.0) -> RestraintsScoringFunction
6547  __init__(IMP::core::RestraintsScoringFunction self, _RestraintsAdaptor rs) -> RestraintsScoringFunction
6548  __init__(IMP::core::RestraintsScoringFunction self, _RestraintsAdaptor rs, std::string name) -> RestraintsScoringFunction
6549  """
6550  this = _IMP_core.new_RestraintsScoringFunction(*args)
6551  try: self.this.append(this)
6552  except: self.this = this
6553  def do_add_score_and_derivatives(self, *args):
6554  """do_add_score_and_derivatives(RestraintsScoringFunction self, ScoreAccumulator sa, IMP::kernel::ScoreStatesTemp const & ss)"""
6555  return _IMP_core.RestraintsScoringFunction_do_add_score_and_derivatives(self, *args)
6556 
6557  def do_get_inputs(self):
6558  """do_get_inputs(RestraintsScoringFunction self) -> IMP::kernel::ModelObjectsTemp"""
6559  return _IMP_core.RestraintsScoringFunction_do_get_inputs(self)
6560 
6561  def get_version_info(self):
6562  """get_version_info(RestraintsScoringFunction self) -> VersionInfo"""
6563  return _IMP_core.RestraintsScoringFunction_get_version_info(self)
6564 
6565  def __str__(self):
6566  """__str__(RestraintsScoringFunction self) -> std::string"""
6567  return _IMP_core.RestraintsScoringFunction___str__(self)
6568 
6569  def __repr__(self):
6570  """__repr__(RestraintsScoringFunction self) -> std::string"""
6571  return _IMP_core.RestraintsScoringFunction___repr__(self)
6572 
6573  def get_from(o):
6574  return _object_cast_to_RestraintsScoringFunction(o)
6575  get_from = staticmethod(get_from)
6576 
6577 RestraintsScoringFunction_swigregister = _IMP_core.RestraintsScoringFunction_swigregister
6578 RestraintsScoringFunction_swigregister(RestraintsScoringFunction)
6579 
6580 class RigidClosePairsFinder(ClosePairsFinder):
6581  """Proxy of C++ IMP::core::RigidClosePairsFinder class"""
6582  __swig_setmethods__ = {}
6583  for _s in [ClosePairsFinder]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
6584  __setattr__ = lambda self, name, value: _swig_setattr(self, RigidClosePairsFinder, name, value)
6585  __swig_getmethods__ = {}
6586  for _s in [ClosePairsFinder]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
6587  __getattr__ = lambda self, name: _swig_getattr(self, RigidClosePairsFinder, name)
6588  def __init__(self, cpf=None):
6589  """
6590  __init__(IMP::core::RigidClosePairsFinder self, ClosePairsFinder cpf=None) -> RigidClosePairsFinder
6591  __init__(IMP::core::RigidClosePairsFinder self) -> RigidClosePairsFinder
6592  """
6593  this = _IMP_core.new_RigidClosePairsFinder(cpf)
6594  try: self.this.append(this)
6595  except: self.this = this
6596  def do_get_inputs(self, *args):
6597  """do_get_inputs(RigidClosePairsFinder self, Model m, IMP::kernel::ParticleIndexes const & pis) -> IMP::kernel::ModelObjectsTemp"""
6598  return _IMP_core.RigidClosePairsFinder_do_get_inputs(self, *args)
6599 
6600  def get_close_pairs(self, *args):
6601  """
6602  get_close_pairs(RigidClosePairsFinder self, Model m, IMP::kernel::ParticleIndex a, IMP::kernel::ParticleIndex b, IMP::kernel::ParticleIndexes const & pa,
6603  IMP::kernel::ParticleIndexes const & pb) -> IMP::kernel::ParticleIndexPairs
6604  get_close_pairs(RigidClosePairsFinder self, IMP::kernel::ParticlesTemp const & pc) -> IMP::kernel::ParticlePairsTemp
6605  get_close_pairs(RigidClosePairsFinder self, IMP::kernel::ParticlesTemp const & pca, IMP::kernel::ParticlesTemp const & pcb) -> IMP::kernel::ParticlePairsTemp
6606  get_close_pairs(RigidClosePairsFinder self, IMP::algebra::BoundingBox3Ds const & bbs) -> IMP::IntPairs
6607  get_close_pairs(RigidClosePairsFinder self, IMP::algebra::BoundingBox3Ds const & bas, IMP::algebra::BoundingBox3Ds const & bbs) -> IMP::IntPairs
6608  get_close_pairs(RigidClosePairsFinder self, Model m, IMP::kernel::ParticleIndexes const & pc) -> IMP::kernel::ParticleIndexPairs
6609  get_close_pairs(RigidClosePairsFinder self, Model m, IMP::kernel::ParticleIndexes const & pca, IMP::kernel::ParticleIndexes const & pcb) -> IMP::kernel::ParticleIndexPairs
6610  """
6611  return _IMP_core.RigidClosePairsFinder_get_close_pairs(self, *args)
6612 
6613  def get_version_info(self):
6614  """get_version_info(RigidClosePairsFinder self) -> VersionInfo"""
6615  return _IMP_core.RigidClosePairsFinder_get_version_info(self)
6616 
6617  def __str__(self):
6618  """__str__(RigidClosePairsFinder self) -> std::string"""
6619  return _IMP_core.RigidClosePairsFinder___str__(self)
6620 
6621  def __repr__(self):
6622  """__repr__(RigidClosePairsFinder self) -> std::string"""
6623  return _IMP_core.RigidClosePairsFinder___repr__(self)
6624 
6625  def get_from(o):
6626  return _object_cast_to_RigidClosePairsFinder(o)
6627  get_from = staticmethod(get_from)
6628 
6629 RigidClosePairsFinder_swigregister = _IMP_core.RigidClosePairsFinder_swigregister
6630 RigidClosePairsFinder_swigregister(RigidClosePairsFinder)
6631 
6632 class SphereDistancePairScore(IMP.kernel.PairScore):
6633  """Proxy of C++ IMP::core::SphereDistancePairScore class"""
6634  __swig_setmethods__ = {}
6635  for _s in [IMP.kernel.PairScore]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
6636  __setattr__ = lambda self, name, value: _swig_setattr(self, SphereDistancePairScore, name, value)
6637  __swig_getmethods__ = {}
6638  for _s in [IMP.kernel.PairScore]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
6639  __getattr__ = lambda self, name: _swig_getattr(self, SphereDistancePairScore, name)
6640  def __init__(self, *args):
6641  """
6642  __init__(IMP::core::SphereDistancePairScore self, UnaryFunction uf, std::string name="SphereDistancePairScore%1%") -> SphereDistancePairScore
6643  __init__(IMP::core::SphereDistancePairScore self, UnaryFunction uf) -> SphereDistancePairScore
6644  """
6645  this = _IMP_core.new_SphereDistancePairScore(*args)
6646  try: self.this.append(this)
6647  except: self.this = this
6648  def do_get_inputs(self, *args):
6649  """do_get_inputs(SphereDistancePairScore self, Model m, IMP::kernel::ParticleIndexes const & pis) -> IMP::kernel::ModelObjectsTemp"""
6650  return _IMP_core.SphereDistancePairScore_do_get_inputs(self, *args)
6651 
6652  def get_version_info(self):
6653  """get_version_info(SphereDistancePairScore self) -> VersionInfo"""
6654  return _IMP_core.SphereDistancePairScore_get_version_info(self)
6655 
6656  def __str__(self):
6657  """__str__(SphereDistancePairScore self) -> std::string"""
6658  return _IMP_core.SphereDistancePairScore___str__(self)
6659 
6660  def __repr__(self):
6661  """__repr__(SphereDistancePairScore self) -> std::string"""
6662  return _IMP_core.SphereDistancePairScore___repr__(self)
6663 
6664  def get_from(o):
6665  return _object_cast_to_SphereDistancePairScore(o)
6666  get_from = staticmethod(get_from)
6667 
6668 SphereDistancePairScore_swigregister = _IMP_core.SphereDistancePairScore_swigregister
6669 SphereDistancePairScore_swigregister(SphereDistancePairScore)
6670 
6671 class HarmonicUpperBoundSphereDistancePairScore(IMP.kernel.PairScore):
6672  """Proxy of C++ IMP::core::HarmonicUpperBoundSphereDistancePairScore class"""
6673  __swig_setmethods__ = {}
6674  for _s in [IMP.kernel.PairScore]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
6675  __setattr__ = lambda self, name, value: _swig_setattr(self, HarmonicUpperBoundSphereDistancePairScore, name, value)
6676  __swig_getmethods__ = {}
6677  for _s in [IMP.kernel.PairScore]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
6678  __getattr__ = lambda self, name: _swig_getattr(self, HarmonicUpperBoundSphereDistancePairScore, name)
6679  def __init__(self, *args):
6680  """
6681  __init__(IMP::core::HarmonicUpperBoundSphereDistancePairScore self, double x0, double k, std::string name="HarmonicUpperBoundSphereDistancePairScore%1%") -> HarmonicUpperBoundSphereDistancePairScore
6682  __init__(IMP::core::HarmonicUpperBoundSphereDistancePairScore self, double x0, double k) -> HarmonicUpperBoundSphereDistancePairScore
6683  """
6684  this = _IMP_core.new_HarmonicUpperBoundSphereDistancePairScore(*args)
6685  try: self.this.append(this)
6686  except: self.this = this
6687  def do_get_inputs(self, *args):
6688  """do_get_inputs(HarmonicUpperBoundSphereDistancePairScore self, Model m, IMP::kernel::ParticleIndexes const & pis) -> IMP::kernel::ModelObjectsTemp"""
6689  return _IMP_core.HarmonicUpperBoundSphereDistancePairScore_do_get_inputs(self, *args)
6690 
6691  def get_version_info(self):
6692  """get_version_info(HarmonicUpperBoundSphereDistancePairScore self) -> VersionInfo"""
6693  return _IMP_core.HarmonicUpperBoundSphereDistancePairScore_get_version_info(self)
6694 
6695  def __str__(self):
6696  """__str__(HarmonicUpperBoundSphereDistancePairScore self) -> std::string"""
6697  return _IMP_core.HarmonicUpperBoundSphereDistancePairScore___str__(self)
6698 
6699  def __repr__(self):
6700  """__repr__(HarmonicUpperBoundSphereDistancePairScore self) -> std::string"""
6701  return _IMP_core.HarmonicUpperBoundSphereDistancePairScore___repr__(self)
6702 
6703  def get_from(o):
6704  return _object_cast_to_HarmonicUpperBoundSphereDistancePairScore(o)
6705  get_from = staticmethod(get_from)
6706 
6707 HarmonicUpperBoundSphereDistancePairScore_swigregister = _IMP_core.HarmonicUpperBoundSphereDistancePairScore_swigregister
6708 HarmonicUpperBoundSphereDistancePairScore_swigregister(HarmonicUpperBoundSphereDistancePairScore)
6709 
6710 class HarmonicUpperBoundSphereDiameterPairScore(IMP.kernel.PairScore):
6711  """Proxy of C++ IMP::core::HarmonicUpperBoundSphereDiameterPairScore class"""
6712  __swig_setmethods__ = {}
6713  for _s in [IMP.kernel.PairScore]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
6714  __setattr__ = lambda self, name, value: _swig_setattr(self, HarmonicUpperBoundSphereDiameterPairScore, name, value)
6715  __swig_getmethods__ = {}
6716  for _s in [IMP.kernel.PairScore]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
6717  __getattr__ = lambda self, name: _swig_getattr(self, HarmonicUpperBoundSphereDiameterPairScore, name)
6718  def __init__(self, *args):
6719  """__init__(IMP::core::HarmonicUpperBoundSphereDiameterPairScore self, double d0, double k) -> HarmonicUpperBoundSphereDiameterPairScore"""
6720  this = _IMP_core.new_HarmonicUpperBoundSphereDiameterPairScore(*args)
6721  try: self.this.append(this)
6722  except: self.this = this
6723  def get_rest_length(self):
6724  """get_rest_length(HarmonicUpperBoundSphereDiameterPairScore self) -> double"""
6725  return _IMP_core.HarmonicUpperBoundSphereDiameterPairScore_get_rest_length(self)
6726 
6727  def get_stiffness(self):
6728  """get_stiffness(HarmonicUpperBoundSphereDiameterPairScore self) -> double"""
6729  return _IMP_core.HarmonicUpperBoundSphereDiameterPairScore_get_stiffness(self)
6730 
6731  def do_get_inputs(self, *args):
6732  """do_get_inputs(HarmonicUpperBoundSphereDiameterPairScore self, Model m, IMP::kernel::ParticleIndexes const & pis) -> IMP::kernel::ModelObjectsTemp"""
6733  return _IMP_core.HarmonicUpperBoundSphereDiameterPairScore_do_get_inputs(self, *args)
6734 
6735  def get_version_info(self):
6736  """get_version_info(HarmonicUpperBoundSphereDiameterPairScore self) -> VersionInfo"""
6737  return _IMP_core.HarmonicUpperBoundSphereDiameterPairScore_get_version_info(self)
6738 
6739  def __str__(self):
6740  """__str__(HarmonicUpperBoundSphereDiameterPairScore self) -> std::string"""
6741  return _IMP_core.HarmonicUpperBoundSphereDiameterPairScore___str__(self)
6742 
6743  def __repr__(self):
6744  """__repr__(HarmonicUpperBoundSphereDiameterPairScore self) -> std::string"""
6745  return _IMP_core.HarmonicUpperBoundSphereDiameterPairScore___repr__(self)
6746 
6747  def get_from(o):
6748  return _object_cast_to_HarmonicUpperBoundSphereDiameterPairScore(o)
6749  get_from = staticmethod(get_from)
6750 
6751 HarmonicUpperBoundSphereDiameterPairScore_swigregister = _IMP_core.HarmonicUpperBoundSphereDiameterPairScore_swigregister
6752 HarmonicUpperBoundSphereDiameterPairScore_swigregister(HarmonicUpperBoundSphereDiameterPairScore)
6753 
6754 class HarmonicSphereDistancePairScore(IMP.kernel.PairScore):
6755  """Proxy of C++ IMP::core::HarmonicSphereDistancePairScore class"""
6756  __swig_setmethods__ = {}
6757  for _s in [IMP.kernel.PairScore]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
6758  __setattr__ = lambda self, name, value: _swig_setattr(self, HarmonicSphereDistancePairScore, name, value)
6759  __swig_getmethods__ = {}
6760  for _s in [IMP.kernel.PairScore]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
6761  __getattr__ = lambda self, name: _swig_getattr(self, HarmonicSphereDistancePairScore, name)
6762  def __init__(self, *args):
6763  """
6764  __init__(IMP::core::HarmonicSphereDistancePairScore self, double x0, double k, std::string name="HarmonicSphereDistancePairScore%1%") -> HarmonicSphereDistancePairScore
6765  __init__(IMP::core::HarmonicSphereDistancePairScore self, double x0, double k) -> HarmonicSphereDistancePairScore
6766  """
6767  this = _IMP_core.new_HarmonicSphereDistancePairScore(*args)
6768  try: self.this.append(this)
6769  except: self.this = this
6770  def do_get_inputs(self, *args):
6771  """do_get_inputs(HarmonicSphereDistancePairScore self, Model m, IMP::kernel::ParticleIndexes const & pis) -> IMP::kernel::ModelObjectsTemp"""
6772  return _IMP_core.HarmonicSphereDistancePairScore_do_get_inputs(self, *args)
6773 
6774  def get_version_info(self):
6775  """get_version_info(HarmonicSphereDistancePairScore self) -> VersionInfo"""
6776  return _IMP_core.HarmonicSphereDistancePairScore_get_version_info(self)
6777 
6778  def __str__(self):
6779  """__str__(HarmonicSphereDistancePairScore self) -> std::string"""
6780  return _IMP_core.HarmonicSphereDistancePairScore___str__(self)
6781 
6782  def __repr__(self):
6783  """__repr__(HarmonicSphereDistancePairScore self) -> std::string"""
6784  return _IMP_core.HarmonicSphereDistancePairScore___repr__(self)
6785 
6786  def get_from(o):
6787  return _object_cast_to_HarmonicSphereDistancePairScore(o)
6788  get_from = staticmethod(get_from)
6789 
6790 HarmonicSphereDistancePairScore_swigregister = _IMP_core.HarmonicSphereDistancePairScore_swigregister
6791 HarmonicSphereDistancePairScore_swigregister(HarmonicSphereDistancePairScore)
6792 
6793 class NormalizedSphereDistancePairScore(IMP.kernel.PairScore):
6794  """Proxy of C++ IMP::core::NormalizedSphereDistancePairScore class"""
6795  __swig_setmethods__ = {}
6796  for _s in [IMP.kernel.PairScore]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
6797  __setattr__ = lambda self, name, value: _swig_setattr(self, NormalizedSphereDistancePairScore, name, value)
6798  __swig_getmethods__ = {}
6799  for _s in [IMP.kernel.PairScore]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
6800  __getattr__ = lambda self, name: _swig_getattr(self, NormalizedSphereDistancePairScore, name)
6801  def __init__(self, *args):
6802  """
6803  __init__(IMP::core::NormalizedSphereDistancePairScore self, UnaryFunction f, FloatKey radius=FloatKey("radius")) -> NormalizedSphereDistancePairScore
6804  __init__(IMP::core::NormalizedSphereDistancePairScore self, UnaryFunction f) -> NormalizedSphereDistancePairScore
6805  """
6806  this = _IMP_core.new_NormalizedSphereDistancePairScore(*args)
6807  try: self.this.append(this)
6808  except: self.this = this
6809  def do_get_inputs(self, *args):
6810  """do_get_inputs(NormalizedSphereDistancePairScore self, Model m, IMP::kernel::ParticleIndexes const & pis) -> IMP::kernel::ModelObjectsTemp"""
6811  return _IMP_core.NormalizedSphereDistancePairScore_do_get_inputs(self, *args)
6812 
6813  def get_version_info(self):
6814  """get_version_info(NormalizedSphereDistancePairScore self) -> VersionInfo"""
6815  return _IMP_core.NormalizedSphereDistancePairScore_get_version_info(self)
6816 
6817  def __str__(self):
6818  """__str__(NormalizedSphereDistancePairScore self) -> std::string"""
6819  return _IMP_core.NormalizedSphereDistancePairScore___str__(self)
6820 
6821  def __repr__(self):
6822  """__repr__(NormalizedSphereDistancePairScore self) -> std::string"""
6823  return _IMP_core.NormalizedSphereDistancePairScore___repr__(self)
6824 
6825  def get_from(o):
6826  return _object_cast_to_NormalizedSphereDistancePairScore(o)
6827  get_from = staticmethod(get_from)
6828 
6829 NormalizedSphereDistancePairScore_swigregister = _IMP_core.NormalizedSphereDistancePairScore_swigregister
6830 NormalizedSphereDistancePairScore_swigregister(NormalizedSphereDistancePairScore)
6831 
6832 class WeightedSphereDistancePairScore(IMP.kernel.PairScore):
6833  """Proxy of C++ IMP::core::WeightedSphereDistancePairScore class"""
6834  __swig_setmethods__ = {}
6835  for _s in [IMP.kernel.PairScore]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
6836  __setattr__ = lambda self, name, value: _swig_setattr(self, WeightedSphereDistancePairScore, name, value)
6837  __swig_getmethods__ = {}
6838  for _s in [IMP.kernel.PairScore]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
6839  __getattr__ = lambda self, name: _swig_getattr(self, WeightedSphereDistancePairScore, name)
6840  def __init__(self, *args):
6841  """
6842  __init__(IMP::core::WeightedSphereDistancePairScore self, UnaryFunction f, FloatKey weight, FloatKey radius=FloatKey("radius")) -> WeightedSphereDistancePairScore
6843  __init__(IMP::core::WeightedSphereDistancePairScore self, UnaryFunction f, FloatKey weight) -> WeightedSphereDistancePairScore
6844  """
6845  this = _IMP_core.new_WeightedSphereDistancePairScore(*args)
6846  try: self.this.append(this)
6847  except: self.this = this
6848  def do_get_inputs(self, *args):
6849  """do_get_inputs(WeightedSphereDistancePairScore self, Model m, IMP::kernel::ParticleIndexes const & pis) -> IMP::kernel::ModelObjectsTemp"""
6850  return _IMP_core.WeightedSphereDistancePairScore_do_get_inputs(self, *args)
6851 
6852  def get_version_info(self):
6853  """get_version_info(WeightedSphereDistancePairScore self) -> VersionInfo"""
6854  return _IMP_core.WeightedSphereDistancePairScore_get_version_info(self)
6855 
6856  def __str__(self):
6857  """__str__(WeightedSphereDistancePairScore self) -> std::string"""
6858  return _IMP_core.WeightedSphereDistancePairScore___str__(self)
6859 
6860  def __repr__(self):
6861  """__repr__(WeightedSphereDistancePairScore self) -> std::string"""
6862  return _IMP_core.WeightedSphereDistancePairScore___repr__(self)
6863 
6864  def get_from(o):
6865  return _object_cast_to_WeightedSphereDistancePairScore(o)
6866  get_from = staticmethod(get_from)
6867 
6868 WeightedSphereDistancePairScore_swigregister = _IMP_core.WeightedSphereDistancePairScore_swigregister
6869 WeightedSphereDistancePairScore_swigregister(WeightedSphereDistancePairScore)
6870 
6871 class SoftSpherePairScore(IMP.kernel.PairScore):
6872  """Proxy of C++ IMP::core::SoftSpherePairScore class"""
6873  __swig_setmethods__ = {}
6874  for _s in [IMP.kernel.PairScore]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
6875  __setattr__ = lambda self, name, value: _swig_setattr(self, SoftSpherePairScore, name, value)
6876  __swig_getmethods__ = {}
6877  for _s in [IMP.kernel.PairScore]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
6878  __getattr__ = lambda self, name: _swig_getattr(self, SoftSpherePairScore, name)
6879  def __init__(self, *args):
6880  """
6881  __init__(IMP::core::SoftSpherePairScore self, double k, std::string name="SoftSpherePairScore%1%") -> SoftSpherePairScore
6882  __init__(IMP::core::SoftSpherePairScore self, double k) -> SoftSpherePairScore
6883  """
6884  this = _IMP_core.new_SoftSpherePairScore(*args)
6885  try: self.this.append(this)
6886  except: self.this = this
6887  def do_get_inputs(self, *args):
6888  """do_get_inputs(SoftSpherePairScore self, Model m, IMP::kernel::ParticleIndexes const & pis) -> IMP::kernel::ModelObjectsTemp"""
6889  return _IMP_core.SoftSpherePairScore_do_get_inputs(self, *args)
6890 
6891  def get_version_info(self):
6892  """get_version_info(SoftSpherePairScore self) -> VersionInfo"""
6893  return _IMP_core.SoftSpherePairScore_get_version_info(self)
6894 
6895  def __str__(self):
6896  """__str__(SoftSpherePairScore self) -> std::string"""
6897  return _IMP_core.SoftSpherePairScore___str__(self)
6898 
6899  def __repr__(self):
6900  """__repr__(SoftSpherePairScore self) -> std::string"""
6901  return _IMP_core.SoftSpherePairScore___repr__(self)
6902 
6903  def get_from(o):
6904  return _object_cast_to_SoftSpherePairScore(o)
6905  get_from = staticmethod(get_from)
6906 
6907 SoftSpherePairScore_swigregister = _IMP_core.SoftSpherePairScore_swigregister
6908 SoftSpherePairScore_swigregister(SoftSpherePairScore)
6909 
6910 class SteepestDescent(IMP.kernel.AttributeOptimizer):
6911  """Proxy of C++ IMP::core::SteepestDescent class"""
6912  __swig_setmethods__ = {}
6913  for _s in [IMP.kernel.AttributeOptimizer]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
6914  __setattr__ = lambda self, name, value: _swig_setattr(self, SteepestDescent, name, value)
6915  __swig_getmethods__ = {}
6916  for _s in [IMP.kernel.AttributeOptimizer]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
6917  __getattr__ = lambda self, name: _swig_getattr(self, SteepestDescent, name)
6918  def __init__(self, *args):
6919  """
6920  __init__(IMP::core::SteepestDescent self, Model m, std::string name="SteepestDescent%1%") -> SteepestDescent
6921  __init__(IMP::core::SteepestDescent self, Model m) -> SteepestDescent
6922  """
6923  this = _IMP_core.new_SteepestDescent(*args)
6924  try: self.this.append(this)
6925  except: self.this = this
6926  def do_optimize(self, *args):
6927  """do_optimize(SteepestDescent self, unsigned int max_steps) -> IMP::Float"""
6928  return _IMP_core.SteepestDescent_do_optimize(self, *args)
6929 
6930  def get_version_info(self):
6931  """get_version_info(SteepestDescent self) -> VersionInfo"""
6932  return _IMP_core.SteepestDescent_get_version_info(self)
6933 
6934  def set_threshold(self, *args):
6935  """set_threshold(SteepestDescent self, IMP::Float t)"""
6936  return _IMP_core.SteepestDescent_set_threshold(self, *args)
6937 
6938  def set_step_size(self, *args):
6939  """set_step_size(SteepestDescent self, IMP::Float t)"""
6940  return _IMP_core.SteepestDescent_set_step_size(self, *args)
6941 
6942  def set_maximum_step_size(self, *args):
6943  """set_maximum_step_size(SteepestDescent self, IMP::Float t)"""
6944  return _IMP_core.SteepestDescent_set_maximum_step_size(self, *args)
6945 
6946  def __str__(self):
6947  """__str__(SteepestDescent self) -> std::string"""
6948  return _IMP_core.SteepestDescent___str__(self)
6949 
6950  def __repr__(self):
6951  """__repr__(SteepestDescent self) -> std::string"""
6952  return _IMP_core.SteepestDescent___repr__(self)
6953 
6954  def get_from(o):
6955  return _object_cast_to_SteepestDescent(o)
6956  get_from = staticmethod(get_from)
6957 
6958 SteepestDescent_swigregister = _IMP_core.SteepestDescent_swigregister
6959 SteepestDescent_swigregister(SteepestDescent)
6960 
6961 class TransformedDistancePairScore(IMP.kernel.PairScore):
6962  """Proxy of C++ IMP::core::TransformedDistancePairScore class"""
6963  __swig_setmethods__ = {}
6964  for _s in [IMP.kernel.PairScore]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
6965  __setattr__ = lambda self, name, value: _swig_setattr(self, TransformedDistancePairScore, name, value)
6966  __swig_getmethods__ = {}
6967  for _s in [IMP.kernel.PairScore]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
6968  __getattr__ = lambda self, name: _swig_getattr(self, TransformedDistancePairScore, name)
6969  def __init__(self, *args):
6970  """__init__(IMP::core::TransformedDistancePairScore self, UnaryFunction f, Transformation3D transformation) -> TransformedDistancePairScore"""
6971  this = _IMP_core.new_TransformedDistancePairScore(*args)
6972  try: self.this.append(this)
6973  except: self.this = this
6974  def set_transformation(self, *args):
6975  """set_transformation(TransformedDistancePairScore self, Transformation3D rot)"""
6976  return _IMP_core.TransformedDistancePairScore_set_transformation(self, *args)
6977 
6978  def do_get_inputs(self, *args):
6979  """do_get_inputs(TransformedDistancePairScore self, Model m, IMP::kernel::ParticleIndexes const & pis) -> IMP::kernel::ModelObjectsTemp"""
6980  return _IMP_core.TransformedDistancePairScore_do_get_inputs(self, *args)
6981 
6982  def get_version_info(self):
6983  """get_version_info(TransformedDistancePairScore self) -> VersionInfo"""
6984  return _IMP_core.TransformedDistancePairScore_get_version_info(self)
6985 
6986  def __str__(self):
6987  """__str__(TransformedDistancePairScore self) -> std::string"""
6988  return _IMP_core.TransformedDistancePairScore___str__(self)
6989 
6990  def __repr__(self):
6991  """__repr__(TransformedDistancePairScore self) -> std::string"""
6992  return _IMP_core.TransformedDistancePairScore___repr__(self)
6993 
6994  def get_from(o):
6995  return _object_cast_to_TransformedDistancePairScore(o)
6996  get_from = staticmethod(get_from)
6997 
6998 TransformedDistancePairScore_swigregister = _IMP_core.TransformedDistancePairScore_swigregister
6999 TransformedDistancePairScore_swigregister(TransformedDistancePairScore)
7000 
7001 class TypedPairScore(IMP.kernel.PairScore):
7002  """Proxy of C++ IMP::core::TypedPairScore class"""
7003  __swig_setmethods__ = {}
7004  for _s in [IMP.kernel.PairScore]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
7005  __setattr__ = lambda self, name, value: _swig_setattr(self, TypedPairScore, name, value)
7006  __swig_getmethods__ = {}
7007  for _s in [IMP.kernel.PairScore]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
7008  __getattr__ = lambda self, name: _swig_getattr(self, TypedPairScore, name)
7009  def __init__(self, *args):
7010  """
7011  __init__(IMP::core::TypedPairScore self, IntKey typekey, bool allow_invalid_types=True) -> TypedPairScore
7012  __init__(IMP::core::TypedPairScore self, IntKey typekey) -> TypedPairScore
7013  """
7014  this = _IMP_core.new_TypedPairScore(*args)
7015  try: self.this.append(this)
7016  except: self.this = this
7017  def set_particle_type(self, *args):
7018  """set_particle_type(TypedPairScore self, Particle arg2)"""
7019  return _IMP_core.TypedPairScore_set_particle_type(self, *args)
7020 
7021  def set_pair_score(self, *args):
7022  """set_pair_score(TypedPairScore self, PairScore ps, IMP::Int atype, IMP::Int btype)"""
7023  return _IMP_core.TypedPairScore_set_pair_score(self, *args)
7024 
7025  def do_get_inputs(self, *args):
7026  """do_get_inputs(TypedPairScore self, Model m, IMP::kernel::ParticleIndexes const & pis) -> IMP::kernel::ModelObjectsTemp"""
7027  return _IMP_core.TypedPairScore_do_get_inputs(self, *args)
7028 
7029  def get_version_info(self):
7030  """get_version_info(TypedPairScore self) -> VersionInfo"""
7031  return _IMP_core.TypedPairScore_get_version_info(self)
7032 
7033  def __str__(self):
7034  """__str__(TypedPairScore self) -> std::string"""
7035  return _IMP_core.TypedPairScore___str__(self)
7036 
7037  def __repr__(self):
7038  """__repr__(TypedPairScore self) -> std::string"""
7039  return _IMP_core.TypedPairScore___repr__(self)
7040 
7041  def get_from(o):
7042  return _object_cast_to_TypedPairScore(o)
7043  get_from = staticmethod(get_from)
7044 
7045 TypedPairScore_swigregister = _IMP_core.TypedPairScore_swigregister
7046 TypedPairScore_swigregister(TypedPairScore)
7047 
7048 class RigidBodyDistancePairScore(KClosePairsPairScore):
7049  """Proxy of C++ IMP::core::RigidBodyDistancePairScore class"""
7050  __swig_setmethods__ = {}
7051  for _s in [KClosePairsPairScore]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
7052  __setattr__ = lambda self, name, value: _swig_setattr(self, RigidBodyDistancePairScore, name, value)
7053  __swig_getmethods__ = {}
7054  for _s in [KClosePairsPairScore]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
7055  __getattr__ = lambda self, name: _swig_getattr(self, RigidBodyDistancePairScore, name)
7056  def __init__(self, *args):
7057  """__init__(IMP::core::RigidBodyDistancePairScore self, PairScore ps, Refiner r) -> RigidBodyDistancePairScore"""
7058  this = _IMP_core.new_RigidBodyDistancePairScore(*args)
7059  try: self.this.append(this)
7060  except: self.this = this
7061  def __str__(self):
7062  """__str__(RigidBodyDistancePairScore self) -> std::string"""
7063  return _IMP_core.RigidBodyDistancePairScore___str__(self)
7064 
7065  def __repr__(self):
7066  """__repr__(RigidBodyDistancePairScore self) -> std::string"""
7067  return _IMP_core.RigidBodyDistancePairScore___repr__(self)
7068 
7069  def get_from(o):
7070  return _object_cast_to_RigidBodyDistancePairScore(o)
7071  get_from = staticmethod(get_from)
7072 
7073  __swig_destroy__ = _IMP_core.delete_RigidBodyDistancePairScore
7074  __del__ = lambda self : None;
7075 RigidBodyDistancePairScore_swigregister = _IMP_core.RigidBodyDistancePairScore_swigregister
7076 RigidBodyDistancePairScore_swigregister(RigidBodyDistancePairScore)
7077 
7078 class TableRefiner(IMP.kernel.Refiner):
7079  """Proxy of C++ IMP::core::TableRefiner class"""
7080  __swig_setmethods__ = {}
7081  for _s in [IMP.kernel.Refiner]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
7082  __setattr__ = lambda self, name, value: _swig_setattr(self, TableRefiner, name, value)
7083  __swig_getmethods__ = {}
7084  for _s in [IMP.kernel.Refiner]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
7085  __getattr__ = lambda self, name: _swig_getattr(self, TableRefiner, name)
7086  def __init__(self):
7087  """__init__(IMP::core::TableRefiner self) -> TableRefiner"""
7088  this = _IMP_core.new_TableRefiner()
7089  try: self.this.append(this)
7090  except: self.this = this
7091  def add_particle(self, *args):
7092  """add_particle(TableRefiner self, Particle p, IMP::kernel::ParticlesTemp const & ps)"""
7093  return _IMP_core.TableRefiner_add_particle(self, *args)
7094 
7095  def remove_particle(self, *args):
7096  """remove_particle(TableRefiner self, Particle p)"""
7097  return _IMP_core.TableRefiner_remove_particle(self, *args)
7098 
7099  def set_particle(self, *args):
7100  """set_particle(TableRefiner self, Particle p, IMP::kernel::ParticlesTemp const & ps)"""
7101  return _IMP_core.TableRefiner_set_particle(self, *args)
7102 
7103  def do_get_inputs(self, *args):
7104  """do_get_inputs(TableRefiner self, Model m, IMP::kernel::ParticleIndexes const & pis) -> IMP::kernel::ModelObjectsTemp"""
7105  return _IMP_core.TableRefiner_do_get_inputs(self, *args)
7106 
7107  def get_version_info(self):
7108  """get_version_info(TableRefiner self) -> VersionInfo"""
7109  return _IMP_core.TableRefiner_get_version_info(self)
7110 
7111  def __str__(self):
7112  """__str__(TableRefiner self) -> std::string"""
7113  return _IMP_core.TableRefiner___str__(self)
7114 
7115  def __repr__(self):
7116  """__repr__(TableRefiner self) -> std::string"""
7117  return _IMP_core.TableRefiner___repr__(self)
7118 
7119  def get_from(o):
7120  return _object_cast_to_TableRefiner(o)
7121  get_from = staticmethod(get_from)
7122 
7123 TableRefiner_swigregister = _IMP_core.TableRefiner_swigregister
7124 TableRefiner_swigregister(TableRefiner)
7125 
7126 LOWER = _IMP_core.LOWER
7127 BOTH = _IMP_core.BOTH
7128 UPPER = _IMP_core.UPPER
7129 class MCCGSampler(IMP.kernel.Sampler):
7130  """Proxy of C++ IMP::core::MCCGSampler class"""
7131  __swig_setmethods__ = {}
7132  for _s in [IMP.kernel.Sampler]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
7133  __setattr__ = lambda self, name, value: _swig_setattr(self, MCCGSampler, name, value)
7134  __swig_getmethods__ = {}
7135  for _s in [IMP.kernel.Sampler]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
7136  __getattr__ = lambda self, name: _swig_getattr(self, MCCGSampler, name)
7137  def __init__(self, *args):
7138  """
7139  __init__(IMP::core::MCCGSampler self, Model m, std::string name="MCCG Sampler %1%") -> MCCGSampler
7140  __init__(IMP::core::MCCGSampler self, Model m) -> MCCGSampler
7141  """
7142  this = _IMP_core.new_MCCGSampler(*args)
7143  try: self.this.append(this)
7144  except: self.this = this
7145  def set_bounding_box(self, *args):
7146  """set_bounding_box(MCCGSampler self, BoundingBox3D bb)"""
7147  return _IMP_core.MCCGSampler_set_bounding_box(self, *args)
7148 
7149  def set_number_of_attempts(self, *args):
7150  """set_number_of_attempts(MCCGSampler self, unsigned int att)"""
7151  return _IMP_core.MCCGSampler_set_number_of_attempts(self, *args)
7152 
7153  def set_number_of_monte_carlo_steps(self, *args):
7154  """set_number_of_monte_carlo_steps(MCCGSampler self, unsigned int cg)"""
7155  return _IMP_core.MCCGSampler_set_number_of_monte_carlo_steps(self, *args)
7156 
7157  def set_number_of_conjugate_gradient_steps(self, *args):
7158  """set_number_of_conjugate_gradient_steps(MCCGSampler self, unsigned int cg)"""
7159  return _IMP_core.MCCGSampler_set_number_of_conjugate_gradient_steps(self, *args)
7160 
7161  def set_max_monte_carlo_step_size(self, *args):
7162  """
7163  set_max_monte_carlo_step_size(MCCGSampler self, double d)
7164  set_max_monte_carlo_step_size(MCCGSampler self, FloatKey k, double d)
7165  """
7166  return _IMP_core.MCCGSampler_set_max_monte_carlo_step_size(self, *args)
7167 
7168  def set_is_refining(self, *args):
7169  """set_is_refining(MCCGSampler self, bool tf)"""
7170  return _IMP_core.MCCGSampler_set_is_refining(self, *args)
7171 
7172  def set_local_optimizer(self, *args):
7173  """set_local_optimizer(MCCGSampler self, Optimizer opt)"""
7174  return _IMP_core.MCCGSampler_set_local_optimizer(self, *args)
7175 
7176  def set_save_rejected_configurations(self, *args):
7177  """set_save_rejected_configurations(MCCGSampler self, bool tf)"""
7178  return _IMP_core.MCCGSampler_set_save_rejected_configurations(self, *args)
7179 
7180  def get_rejected_configurations(self):
7181  """get_rejected_configurations(MCCGSampler self) -> ConfigurationSet"""
7182  return _IMP_core.MCCGSampler_get_rejected_configurations(self)
7183 
7184  def remove_optimizer_state(self, *args):
7185  """remove_optimizer_state(MCCGSampler self, OptimizerState d)"""
7186  return _IMP_core.MCCGSampler_remove_optimizer_state(self, *args)
7187 
7188  def remove_optimizer_states(self, *args):
7189  """remove_optimizer_states(MCCGSampler self, IMP::kernel::OptimizerStates const & d)"""
7190  return _IMP_core.MCCGSampler_remove_optimizer_states(self, *args)
7191 
7192  def set_optimizer_states(self, *args):
7193  """set_optimizer_states(MCCGSampler self, IMP::kernel::OptimizerStates const & ps)"""
7194  return _IMP_core.MCCGSampler_set_optimizer_states(self, *args)
7195 
7196  def set_optimizer_states_order(self, *args):
7197  """set_optimizer_states_order(MCCGSampler self, IMP::kernel::OptimizerStates const & objs)"""
7198  return _IMP_core.MCCGSampler_set_optimizer_states_order(self, *args)
7199 
7200  def add_optimizer_state(self, *args):
7201  """add_optimizer_state(MCCGSampler self, OptimizerState obj) -> unsigned int"""
7202  return _IMP_core.MCCGSampler_add_optimizer_state(self, *args)
7203 
7204  def add_optimizer_states(self, *args):
7205  """add_optimizer_states(MCCGSampler self, IMP::kernel::OptimizerStates const & objs)"""
7206  return _IMP_core.MCCGSampler_add_optimizer_states(self, *args)
7207 
7208  def clear_optimizer_states(self):
7209  """clear_optimizer_states(MCCGSampler self)"""
7210  return _IMP_core.MCCGSampler_clear_optimizer_states(self)
7211 
7212  def get_number_of_optimizer_states(self):
7213  """get_number_of_optimizer_states(MCCGSampler self) -> unsigned int"""
7214  return _IMP_core.MCCGSampler_get_number_of_optimizer_states(self)
7215 
7216  def get_has_optimizer_states(self):
7217  """get_has_optimizer_states(MCCGSampler self) -> bool"""
7218  return _IMP_core.MCCGSampler_get_has_optimizer_states(self)
7219 
7220  def get_optimizer_state(self, *args):
7221  """get_optimizer_state(MCCGSampler self, unsigned int i) -> OptimizerState"""
7222  return _IMP_core.MCCGSampler_get_optimizer_state(self, *args)
7223 
7224  def get_optimizer_states(self):
7225  """get_optimizer_states(MCCGSampler self) -> IMP::kernel::OptimizerStates"""
7226  return _IMP_core.MCCGSampler_get_optimizer_states(self)
7227 
7228  def reserve_optimizer_states(self, *args):
7229  """reserve_optimizer_states(MCCGSampler self, unsigned int sz)"""
7230  return _IMP_core.MCCGSampler_reserve_optimizer_states(self, *args)
7231 
7232  def do_sample(self):
7233  """do_sample(MCCGSampler self) -> ConfigurationSet"""
7234  return _IMP_core.MCCGSampler_do_sample(self)
7235 
7236  def get_version_info(self):
7237  """get_version_info(MCCGSampler self) -> VersionInfo"""
7238  return _IMP_core.MCCGSampler_get_version_info(self)
7239 
7240  def __str__(self):
7241  """__str__(MCCGSampler self) -> std::string"""
7242  return _IMP_core.MCCGSampler___str__(self)
7243 
7244  def __repr__(self):
7245  """__repr__(MCCGSampler self) -> std::string"""
7246  return _IMP_core.MCCGSampler___repr__(self)
7247 
7248  def get_from(o):
7249  return _object_cast_to_MCCGSampler(o)
7250  get_from = staticmethod(get_from)
7251 
7252 MCCGSampler_swigregister = _IMP_core.MCCGSampler_swigregister
7253 MCCGSampler_swigregister(MCCGSampler)
7254 
7255 class MinimumRestraint(IMP.kernel.Restraint):
7256  """Proxy of C++ IMP::core::MinimumRestraint class"""
7257  __swig_setmethods__ = {}
7258  for _s in [IMP.kernel.Restraint]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
7259  __setattr__ = lambda self, name, value: _swig_setattr(self, MinimumRestraint, name, value)
7260  __swig_getmethods__ = {}
7261  for _s in [IMP.kernel.Restraint]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
7262  __getattr__ = lambda self, name: _swig_getattr(self, MinimumRestraint, name)
7263  def __init__(self, *args):
7264  """
7265  __init__(IMP::core::MinimumRestraint self, unsigned int num, IMP::kernel::Restraints const & rs=IMP::kernel::Restraints(), std::string name="MinimumRestraint %1%") -> MinimumRestraint
7266  __init__(IMP::core::MinimumRestraint self, unsigned int num, IMP::kernel::Restraints const & rs=IMP::kernel::Restraints()) -> MinimumRestraint
7267  __init__(IMP::core::MinimumRestraint self, unsigned int num) -> MinimumRestraint
7268  """
7269  this = _IMP_core.new_MinimumRestraint(*args)
7270  try: self.this.append(this)
7271  except: self.this = this
7272  def do_get_inputs(self):
7273  """do_get_inputs(MinimumRestraint self) -> IMP::kernel::ModelObjectsTemp"""
7274  return _IMP_core.MinimumRestraint_do_get_inputs(self)
7275 
7276  def get_version_info(self):
7277  """get_version_info(MinimumRestraint self) -> VersionInfo"""
7278  return _IMP_core.MinimumRestraint_get_version_info(self)
7279 
7280  def remove_restraint(self, *args):
7281  """remove_restraint(MinimumRestraint self, Restraint d)"""
7282  return _IMP_core.MinimumRestraint_remove_restraint(self, *args)
7283 
7284  def remove_restraints(self, *args):
7285  """remove_restraints(MinimumRestraint self, IMP::kernel::Restraints const & d)"""
7286  return _IMP_core.MinimumRestraint_remove_restraints(self, *args)
7287 
7288  def set_restraints(self, *args):
7289  """set_restraints(MinimumRestraint self, IMP::kernel::Restraints const & ps)"""
7290  return _IMP_core.MinimumRestraint_set_restraints(self, *args)
7291 
7292  def set_restraints_order(self, *args):
7293  """set_restraints_order(MinimumRestraint self, IMP::kernel::Restraints const & objs)"""
7294  return _IMP_core.MinimumRestraint_set_restraints_order(self, *args)
7295 
7296  def add_restraint(self, *args):
7297  """add_restraint(MinimumRestraint self, Restraint obj) -> unsigned int"""
7298  return _IMP_core.MinimumRestraint_add_restraint(self, *args)
7299 
7300  def add_restraints(self, *args):
7301  """add_restraints(MinimumRestraint self, IMP::kernel::Restraints const & objs)"""
7302  return _IMP_core.MinimumRestraint_add_restraints(self, *args)
7303 
7304  def clear_restraints(self):
7305  """clear_restraints(MinimumRestraint self)"""
7306  return _IMP_core.MinimumRestraint_clear_restraints(self)
7307 
7308  def get_number_of_restraints(self):
7309  """get_number_of_restraints(MinimumRestraint self) -> unsigned int"""
7310  return _IMP_core.MinimumRestraint_get_number_of_restraints(self)
7311 
7312  def get_has_restraints(self):
7313  """get_has_restraints(MinimumRestraint self) -> bool"""
7314  return _IMP_core.MinimumRestraint_get_has_restraints(self)
7315 
7316  def get_restraint(self, *args):
7317  """get_restraint(MinimumRestraint self, unsigned int i) -> Restraint"""
7318  return _IMP_core.MinimumRestraint_get_restraint(self, *args)
7319 
7320  def get_restraints(self):
7321  """get_restraints(MinimumRestraint self) -> IMP::kernel::Restraints"""
7322  return _IMP_core.MinimumRestraint_get_restraints(self)
7323 
7324  def reserve_restraints(self, *args):
7325  """reserve_restraints(MinimumRestraint self, unsigned int sz)"""
7326  return _IMP_core.MinimumRestraint_reserve_restraints(self, *args)
7327 
7328  def __str__(self):
7329  """__str__(MinimumRestraint self) -> std::string"""
7330  return _IMP_core.MinimumRestraint___str__(self)
7331 
7332  def __repr__(self):
7333  """__repr__(MinimumRestraint self) -> std::string"""
7334  return _IMP_core.MinimumRestraint___repr__(self)
7335 
7336  def get_from(o):
7337  return _object_cast_to_MinimumRestraint(o)
7338  get_from = staticmethod(get_from)
7339 
7340 MinimumRestraint_swigregister = _IMP_core.MinimumRestraint_swigregister
7341 MinimumRestraint_swigregister(MinimumRestraint)
7342 
7343 class Gaussian(RigidBody):
7344  """Proxy of C++ IMP::core::Gaussian class"""
7345  __swig_setmethods__ = {}
7346  for _s in [RigidBody]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
7347  __setattr__ = lambda self, name, value: _swig_setattr(self, Gaussian, name, value)
7348  __swig_getmethods__ = {}
7349  for _s in [RigidBody]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
7350  __getattr__ = lambda self, name: _swig_getattr(self, Gaussian, name)
7351  def __init__(self, *args):
7352  """
7353  __init__(IMP::core::Gaussian self) -> Gaussian
7354  __init__(IMP::core::Gaussian self, Model m, ::IMP::kernel::ParticleIndex id) -> Gaussian
7355  __init__(IMP::core::Gaussian self, _ParticleAdaptor d) -> Gaussian
7356  """
7357  this = _IMP_core.new_Gaussian(*args)
7358  try: self.this.append(this)
7359  except: self.this = this
7360  def show(self, *args):
7361  """
7362  show(Gaussian self, _ostream out=std::cout)
7363  show(Gaussian self)
7364  """
7365  return _IMP_core.Gaussian_show(self, *args)
7366 
7367  def setup_particle(*args):
7368  """
7369  setup_particle(Model m, IMP::kernel::ParticleIndex pi) -> Gaussian
7370  setup_particle(_ParticleAdaptor decorator) -> Gaussian
7371  setup_particle(Model m, IMP::kernel::ParticleIndex pi, Gaussian3D g) -> Gaussian
7372  setup_particle(_ParticleAdaptor decorator, Gaussian3D g) -> Gaussian
7373  """
7374  return _IMP_core.Gaussian_setup_particle(*args)
7375 
7376  if _newclass:setup_particle = staticmethod(setup_particle)
7377  __swig_getmethods__["setup_particle"] = lambda x: setup_particle
7378  def get_local_covariance_key():
7379  """get_local_covariance_key() -> ObjectKey"""
7380  return _IMP_core.Gaussian_get_local_covariance_key()
7381 
7382  if _newclass:get_local_covariance_key = staticmethod(get_local_covariance_key)
7383  __swig_getmethods__["get_local_covariance_key"] = lambda x: get_local_covariance_key
7384  def get_global_covariance_key():
7385  """get_global_covariance_key() -> ObjectKey"""
7386  return _IMP_core.Gaussian_get_global_covariance_key()
7387 
7388  if _newclass:get_global_covariance_key = staticmethod(get_global_covariance_key)
7389  __swig_getmethods__["get_global_covariance_key"] = lambda x: get_global_covariance_key
7390  def get_is_setup(*args):
7391  """
7392  get_is_setup(_ParticleAdaptor p) -> bool
7393  get_is_setup(Model m, IMP::kernel::ParticleIndex pi) -> bool
7394  """
7395  return _IMP_core.Gaussian_get_is_setup(*args)
7396 
7397  if _newclass:get_is_setup = staticmethod(get_is_setup)
7398  __swig_getmethods__["get_is_setup"] = lambda x: get_is_setup
7399  def get_local_covariance(self):
7400  """get_local_covariance(Gaussian self) -> IMP_Eigen::Matrix3d"""
7401  return _IMP_core.Gaussian_get_local_covariance(self)
7402 
7403  def get_variances(self):
7404  """get_variances(Gaussian self) -> Vector3D"""
7405  return _IMP_core.Gaussian_get_variances(self)
7406 
7407  def get_global_covariance(self):
7408  """get_global_covariance(Gaussian self) -> IMP_Eigen::Matrix3d"""
7409  return _IMP_core.Gaussian_get_global_covariance(self)
7410 
7411  def get_gaussian(self):
7412  """get_gaussian(Gaussian self) -> Gaussian3D"""
7413  return _IMP_core.Gaussian_get_gaussian(self)
7414 
7415  def set_local_covariance(self, *args):
7416  """set_local_covariance(Gaussian self, IMP_Eigen::Vector3d const covar)"""
7417  return _IMP_core.Gaussian_set_local_covariance(self, *args)
7418 
7419  def set_variances(self, *args):
7420  """set_variances(Gaussian self, Vector3D v)"""
7421  return _IMP_core.Gaussian_set_variances(self, *args)
7422 
7423  def set_global_covariance(self, *args):
7424  """set_global_covariance(Gaussian self, IMP_Eigen::Matrix3d covar)"""
7425  return _IMP_core.Gaussian_set_global_covariance(self, *args)
7426 
7427  def update_global_covariance(self):
7428  """update_global_covariance(Gaussian self)"""
7429  return _IMP_core.Gaussian_update_global_covariance(self)
7430 
7431  def add_attribute(self, *args):
7432  """
7433  add_attribute(Gaussian self, FloatKey k, IMP::Float v, bool opt)
7434  add_attribute(Gaussian self, FloatKey a0, IMP::Float a1)
7435  add_attribute(Gaussian self, IntKey a0, IMP::Int a1)
7436  add_attribute(Gaussian self, StringKey a0, IMP::String a1)
7437  add_attribute(Gaussian self, ParticleIndexKey a0, Particle a1)
7438  add_attribute(Gaussian self, ObjectKey a0, Object a1)
7439  """
7440  return _IMP_core.Gaussian_add_attribute(self, *args)
7441 
7442  def get_value(self, *args):
7443  """
7444  get_value(Gaussian self, FloatKey a0) -> IMP::Float
7445  get_value(Gaussian self, IntKey a0) -> IMP::Int
7446  get_value(Gaussian self, StringKey a0) -> IMP::String
7447  get_value(Gaussian self, ParticleIndexKey a0) -> Particle
7448  get_value(Gaussian self, ObjectKey a0) -> Object
7449  """
7450  return _IMP_core.Gaussian_get_value(self, *args)
7451 
7452  def set_value(self, *args):
7453  """
7454  set_value(Gaussian self, FloatKey a0, IMP::Float a1)
7455  set_value(Gaussian self, IntKey a0, IMP::Int a1)
7456  set_value(Gaussian self, StringKey a0, IMP::String a1)
7457  set_value(Gaussian self, ParticleIndexKey a0, Particle a1)
7458  set_value(Gaussian self, ObjectKey a0, Object a1)
7459  """
7460  return _IMP_core.Gaussian_set_value(self, *args)
7461 
7462  def remove_attribute(self, *args):
7463  """
7464  remove_attribute(Gaussian self, FloatKey a0)
7465  remove_attribute(Gaussian self, IntKey a0)
7466  remove_attribute(Gaussian self, StringKey a0)
7467  remove_attribute(Gaussian self, ParticleIndexKey a0)
7468  remove_attribute(Gaussian self, ObjectKey a0)
7469  """
7470  return _IMP_core.Gaussian_remove_attribute(self, *args)
7471 
7472  def has_attribute(self, *args):
7473  """
7474  has_attribute(Gaussian self, FloatKey a0) -> bool
7475  has_attribute(Gaussian self, IntKey a0) -> bool
7476  has_attribute(Gaussian self, StringKey a0) -> bool
7477  has_attribute(Gaussian self, ParticleIndexKey a0) -> bool
7478  has_attribute(Gaussian self, ObjectKey a0) -> bool
7479  """
7480  return _IMP_core.Gaussian_has_attribute(self, *args)
7481 
7482  def get_derivative(self, *args):
7483  """get_derivative(Gaussian self, FloatKey a0) -> double"""
7484  return _IMP_core.Gaussian_get_derivative(self, *args)
7485 
7486  def get_name(self):
7487  """get_name(Gaussian self) -> std::string"""
7488  return _IMP_core.Gaussian_get_name(self)
7489 
7490  def clear_caches(self):
7491  """clear_caches(Gaussian self)"""
7492  return _IMP_core.Gaussian_clear_caches(self)
7493 
7494  def set_name(self, *args):
7495  """set_name(Gaussian self, std::string a0)"""
7496  return _IMP_core.Gaussian_set_name(self, *args)
7497 
7498  def set_check_level(self, *args):
7499  """set_check_level(Gaussian self, IMP::base::CheckLevel a0)"""
7500  return _IMP_core.Gaussian_set_check_level(self, *args)
7501 
7502  def add_to_derivative(self, *args):
7503  """add_to_derivative(Gaussian self, FloatKey a0, double a1, DerivativeAccumulator a2)"""
7504  return _IMP_core.Gaussian_add_to_derivative(self, *args)
7505 
7506  def set_is_optimized(self, *args):
7507  """set_is_optimized(Gaussian self, FloatKey a0, bool a1)"""
7508  return _IMP_core.Gaussian_set_is_optimized(self, *args)
7509 
7510  def get_is_optimized(self, *args):
7511  """get_is_optimized(Gaussian self, FloatKey a0) -> bool"""
7512  return _IMP_core.Gaussian_get_is_optimized(self, *args)
7513 
7514  def get_check_level(self):
7515  """get_check_level(Gaussian self) -> IMP::base::CheckLevel"""
7516  return _IMP_core.Gaussian_get_check_level(self)
7517 
7518  def __eq__(self, *args):
7519  """
7520  __eq__(Gaussian self, Gaussian o) -> bool
7521  __eq__(Gaussian self, Particle d) -> bool
7522  """
7523  return _IMP_core.Gaussian___eq__(self, *args)
7524 
7525  def __ne__(self, *args):
7526  """
7527  __ne__(Gaussian self, Gaussian o) -> bool
7528  __ne__(Gaussian self, Particle d) -> bool
7529  """
7530  return _IMP_core.Gaussian___ne__(self, *args)
7531 
7532  def __le__(self, *args):
7533  """
7534  __le__(Gaussian self, Gaussian o) -> bool
7535  __le__(Gaussian self, Particle d) -> bool
7536  """
7537  return _IMP_core.Gaussian___le__(self, *args)
7538 
7539  def __lt__(self, *args):
7540  """
7541  __lt__(Gaussian self, Gaussian o) -> bool
7542  __lt__(Gaussian self, Particle d) -> bool
7543  """
7544  return _IMP_core.Gaussian___lt__(self, *args)
7545 
7546  def __ge__(self, *args):
7547  """
7548  __ge__(Gaussian self, Gaussian o) -> bool
7549  __ge__(Gaussian self, Particle d) -> bool
7550  """
7551  return _IMP_core.Gaussian___ge__(self, *args)
7552 
7553  def __gt__(self, *args):
7554  """
7555  __gt__(Gaussian self, Gaussian o) -> bool
7556  __gt__(Gaussian self, Particle d) -> bool
7557  """
7558  return _IMP_core.Gaussian___gt__(self, *args)
7559 
7560  def __str__(self):
7561  """__str__(Gaussian self) -> std::string"""
7562  return _IMP_core.Gaussian___str__(self)
7563 
7564  def __repr__(self):
7565  """__repr__(Gaussian self) -> std::string"""
7566  return _IMP_core.Gaussian___repr__(self)
7567 
7568  __swig_destroy__ = _IMP_core.delete_Gaussian
7569  __del__ = lambda self : None;
7570 Gaussian_swigregister = _IMP_core.Gaussian_swigregister
7571 Gaussian_swigregister(Gaussian)
7572 
7573 def Gaussian_setup_particle(*args):
7574  """
7575  setup_particle(Model m, IMP::kernel::ParticleIndex pi) -> Gaussian
7576  setup_particle(_ParticleAdaptor decorator) -> Gaussian
7577  setup_particle(Model m, IMP::kernel::ParticleIndex pi, Gaussian3D g) -> Gaussian
7578  Gaussian_setup_particle(_ParticleAdaptor decorator, Gaussian3D g) -> Gaussian
7579  """
7580  return _IMP_core.Gaussian_setup_particle(*args)
7581 
7582 def Gaussian_get_local_covariance_key():
7583  """Gaussian_get_local_covariance_key() -> ObjectKey"""
7584  return _IMP_core.Gaussian_get_local_covariance_key()
7585 
7586 def Gaussian_get_global_covariance_key():
7587  """Gaussian_get_global_covariance_key() -> ObjectKey"""
7588  return _IMP_core.Gaussian_get_global_covariance_key()
7589 
7590 def Gaussian_get_is_setup(*args):
7591  """
7592  get_is_setup(_ParticleAdaptor p) -> bool
7593  Gaussian_get_is_setup(Model m, IMP::kernel::ParticleIndex pi) -> bool
7594  """
7595  return _IMP_core.Gaussian_get_is_setup(*args)
7596 
7597 class PairRestraint(IMP.kernel.Restraint):
7598  """Proxy of C++ IMP::core::PairRestraint class"""
7599  __swig_setmethods__ = {}
7600  for _s in [IMP.kernel.Restraint]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
7601  __setattr__ = lambda self, name, value: _swig_setattr(self, PairRestraint, name, value)
7602  __swig_getmethods__ = {}
7603  for _s in [IMP.kernel.Restraint]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
7604  __getattr__ = lambda self, name: _swig_getattr(self, PairRestraint, name)
7605  def __init__(self, *args):
7606  """
7607  __init__(IMP::core::PairRestraint self, PairScore ss, IMP::kernel::ParticlePair const & vt, std::string name="PairRestraint %1%") -> PairRestraint
7608  __init__(IMP::core::PairRestraint self, PairScore ss, IMP::kernel::ParticlePair const & vt) -> PairRestraint
7609  __init__(IMP::core::PairRestraint self, Model m, PairScore ss, IMP::kernel::ParticleIndexPair const & vt, std::string name="PairRestraint %1%") -> PairRestraint
7610  __init__(IMP::core::PairRestraint self, Model m, PairScore ss, IMP::kernel::ParticleIndexPair const & vt) -> PairRestraint
7611  """
7612  this = _IMP_core.new_PairRestraint(*args)
7613  try: self.this.append(this)
7614  except: self.this = this
7615  def get_version_info(self):
7616  """get_version_info(PairRestraint self) -> VersionInfo"""
7617  return _IMP_core.PairRestraint_get_version_info(self)
7618 
7619  def __str__(self):
7620  """__str__(PairRestraint self) -> std::string"""
7621  return _IMP_core.PairRestraint___str__(self)
7622 
7623  def __repr__(self):
7624  """__repr__(PairRestraint self) -> std::string"""
7625  return _IMP_core.PairRestraint___repr__(self)
7626 
7627  def get_from(o):
7628  return _object_cast_to_PairRestraint(o)
7629  get_from = staticmethod(get_from)
7630 
7631 PairRestraint_swigregister = _IMP_core.PairRestraint_swigregister
7632 PairRestraint_swigregister(PairRestraint)
7633 
7634 class SingletonRestraint(IMP.kernel.Restraint):
7635  """Proxy of C++ IMP::core::SingletonRestraint class"""
7636  __swig_setmethods__ = {}
7637  for _s in [IMP.kernel.Restraint]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
7638  __setattr__ = lambda self, name, value: _swig_setattr(self, SingletonRestraint, name, value)
7639  __swig_getmethods__ = {}
7640  for _s in [IMP.kernel.Restraint]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
7641  __getattr__ = lambda self, name: _swig_getattr(self, SingletonRestraint, name)
7642  def __init__(self, *args):
7643  """
7644  __init__(IMP::core::SingletonRestraint self, SingletonScore ss, Particle vt, std::string name="SingletonRestraint %1%") -> SingletonRestraint
7645  __init__(IMP::core::SingletonRestraint self, SingletonScore ss, Particle vt) -> SingletonRestraint
7646  __init__(IMP::core::SingletonRestraint self, Model m, SingletonScore ss, IMP::kernel::ParticleIndex vt, std::string name="SingletonRestraint %1%") -> SingletonRestraint
7647  __init__(IMP::core::SingletonRestraint self, Model m, SingletonScore ss, IMP::kernel::ParticleIndex vt) -> SingletonRestraint
7648  """
7649  this = _IMP_core.new_SingletonRestraint(*args)
7650  try: self.this.append(this)
7651  except: self.this = this
7652  def get_version_info(self):
7653  """get_version_info(SingletonRestraint self) -> VersionInfo"""
7654  return _IMP_core.SingletonRestraint_get_version_info(self)
7655 
7656  def __str__(self):
7657  """__str__(SingletonRestraint self) -> std::string"""
7658  return _IMP_core.SingletonRestraint___str__(self)
7659 
7660  def __repr__(self):
7661  """__repr__(SingletonRestraint self) -> std::string"""
7662  return _IMP_core.SingletonRestraint___repr__(self)
7663 
7664  def get_from(o):
7665  return _object_cast_to_SingletonRestraint(o)
7666  get_from = staticmethod(get_from)
7667 
7668 SingletonRestraint_swigregister = _IMP_core.SingletonRestraint_swigregister
7669 SingletonRestraint_swigregister(SingletonRestraint)
7670 
7671 class TripletRestraint(IMP.kernel.Restraint):
7672  """Proxy of C++ IMP::core::TripletRestraint class"""
7673  __swig_setmethods__ = {}
7674  for _s in [IMP.kernel.Restraint]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
7675  __setattr__ = lambda self, name, value: _swig_setattr(self, TripletRestraint, name, value)
7676  __swig_getmethods__ = {}
7677  for _s in [IMP.kernel.Restraint]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
7678  __getattr__ = lambda self, name: _swig_getattr(self, TripletRestraint, name)
7679  def __init__(self, *args):
7680  """
7681  __init__(IMP::core::TripletRestraint self, TripletScore ss, IMP::kernel::ParticleTriplet const & vt, std::string name="TripletRestraint %1%") -> TripletRestraint
7682  __init__(IMP::core::TripletRestraint self, TripletScore ss, IMP::kernel::ParticleTriplet const & vt) -> TripletRestraint
7683  __init__(IMP::core::TripletRestraint self, Model m, TripletScore ss, IMP::kernel::ParticleIndexTriplet const & vt, std::string name="TripletRestraint %1%") -> TripletRestraint
7684  __init__(IMP::core::TripletRestraint self, Model m, TripletScore ss, IMP::kernel::ParticleIndexTriplet const & vt) -> TripletRestraint
7685  """
7686  this = _IMP_core.new_TripletRestraint(*args)
7687  try: self.this.append(this)
7688  except: self.this = this
7689  def get_version_info(self):
7690  """get_version_info(TripletRestraint self) -> VersionInfo"""
7691  return _IMP_core.TripletRestraint_get_version_info(self)
7692 
7693  def __str__(self):
7694  """__str__(TripletRestraint self) -> std::string"""
7695  return _IMP_core.TripletRestraint___str__(self)
7696 
7697  def __repr__(self):
7698  """__repr__(TripletRestraint self) -> std::string"""
7699  return _IMP_core.TripletRestraint___repr__(self)
7700 
7701  def get_from(o):
7702  return _object_cast_to_TripletRestraint(o)
7703  get_from = staticmethod(get_from)
7704 
7705 TripletRestraint_swigregister = _IMP_core.TripletRestraint_swigregister
7706 TripletRestraint_swigregister(TripletRestraint)
7707 
7708 class QuadRestraint(IMP.kernel.Restraint):
7709  """Proxy of C++ IMP::core::QuadRestraint class"""
7710  __swig_setmethods__ = {}
7711  for _s in [IMP.kernel.Restraint]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
7712  __setattr__ = lambda self, name, value: _swig_setattr(self, QuadRestraint, name, value)
7713  __swig_getmethods__ = {}
7714  for _s in [IMP.kernel.Restraint]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
7715  __getattr__ = lambda self, name: _swig_getattr(self, QuadRestraint, name)
7716  def __init__(self, *args):
7717  """
7718  __init__(IMP::core::QuadRestraint self, QuadScore ss, IMP::kernel::ParticleQuad const & vt, std::string name="QuadRestraint %1%") -> QuadRestraint
7719  __init__(IMP::core::QuadRestraint self, QuadScore ss, IMP::kernel::ParticleQuad const & vt) -> QuadRestraint
7720  __init__(IMP::core::QuadRestraint self, Model m, QuadScore ss, IMP::kernel::ParticleIndexQuad const & vt, std::string name="QuadRestraint %1%") -> QuadRestraint
7721  __init__(IMP::core::QuadRestraint self, Model m, QuadScore ss, IMP::kernel::ParticleIndexQuad const & vt) -> QuadRestraint
7722  """
7723  this = _IMP_core.new_QuadRestraint(*args)
7724  try: self.this.append(this)
7725  except: self.this = this
7726  def get_version_info(self):
7727  """get_version_info(QuadRestraint self) -> VersionInfo"""
7728  return _IMP_core.QuadRestraint_get_version_info(self)
7729 
7730  def __str__(self):
7731  """__str__(QuadRestraint self) -> std::string"""
7732  return _IMP_core.QuadRestraint___str__(self)
7733 
7734  def __repr__(self):
7735  """__repr__(QuadRestraint self) -> std::string"""
7736  return _IMP_core.QuadRestraint___repr__(self)
7737 
7738  def get_from(o):
7739  return _object_cast_to_QuadRestraint(o)
7740  get_from = staticmethod(get_from)
7741 
7742 QuadRestraint_swigregister = _IMP_core.QuadRestraint_swigregister
7743 QuadRestraint_swigregister(QuadRestraint)
7744 
7745 class SingletonConstraint(IMP.kernel.Constraint):
7746  """Proxy of C++ IMP::core::SingletonConstraint class"""
7747  __swig_setmethods__ = {}
7748  for _s in [IMP.kernel.Constraint]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
7749  __setattr__ = lambda self, name, value: _swig_setattr(self, SingletonConstraint, name, value)
7750  __swig_getmethods__ = {}
7751  for _s in [IMP.kernel.Constraint]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
7752  __getattr__ = lambda self, name: _swig_getattr(self, SingletonConstraint, name)
7753  def __init__(self, *args):
7754  """
7755  __init__(IMP::core::SingletonConstraint self, SingletonModifier before, SingletonModifier after, Particle vt, std::string name="SingletonConstraint %1%") -> SingletonConstraint
7756  __init__(IMP::core::SingletonConstraint self, SingletonModifier before, SingletonModifier after, Particle vt) -> SingletonConstraint
7757  __init__(IMP::core::SingletonConstraint self, SingletonModifier before, SingletonModifier after, Model m, IMP::kernel::ParticleIndex vt,
7758  std::string name="SingletonConstraint %1%") -> SingletonConstraint
7759  __init__(IMP::core::SingletonConstraint self, SingletonModifier before, SingletonModifier after, Model m, IMP::kernel::ParticleIndex vt) -> SingletonConstraint
7760  """
7761  this = _IMP_core.new_SingletonConstraint(*args)
7762  try: self.this.append(this)
7763  except: self.this = this
7764  def get_version_info(self):
7765  """get_version_info(SingletonConstraint self) -> VersionInfo"""
7766  return _IMP_core.SingletonConstraint_get_version_info(self)
7767 
7768  def __str__(self):
7769  """__str__(SingletonConstraint self) -> std::string"""
7770  return _IMP_core.SingletonConstraint___str__(self)
7771 
7772  def __repr__(self):
7773  """__repr__(SingletonConstraint self) -> std::string"""
7774  return _IMP_core.SingletonConstraint___repr__(self)
7775 
7776  def get_from(o):
7777  return _object_cast_to_SingletonConstraint(o)
7778  get_from = staticmethod(get_from)
7779 
7780 SingletonConstraint_swigregister = _IMP_core.SingletonConstraint_swigregister
7781 SingletonConstraint_swigregister(SingletonConstraint)
7782 
7783 class PairConstraint(IMP.kernel.Constraint):
7784  """Proxy of C++ IMP::core::PairConstraint class"""
7785  __swig_setmethods__ = {}
7786  for _s in [IMP.kernel.Constraint]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
7787  __setattr__ = lambda self, name, value: _swig_setattr(self, PairConstraint, name, value)
7788  __swig_getmethods__ = {}
7789  for _s in [IMP.kernel.Constraint]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
7790  __getattr__ = lambda self, name: _swig_getattr(self, PairConstraint, name)
7791  def __init__(self, *args):
7792  """
7793  __init__(IMP::core::PairConstraint self, PairModifier before, PairModifier after, IMP::kernel::ParticlePair const & vt, std::string name="PairConstraint %1%") -> PairConstraint
7794  __init__(IMP::core::PairConstraint self, PairModifier before, PairModifier after, IMP::kernel::ParticlePair const & vt) -> PairConstraint
7795  __init__(IMP::core::PairConstraint self, PairModifier before, PairModifier after, Model m, IMP::kernel::ParticleIndexPair const & vt,
7796  std::string name="PairConstraint %1%") -> PairConstraint
7797  __init__(IMP::core::PairConstraint self, PairModifier before, PairModifier after, Model m, IMP::kernel::ParticleIndexPair const & vt) -> PairConstraint
7798  """
7799  this = _IMP_core.new_PairConstraint(*args)
7800  try: self.this.append(this)
7801  except: self.this = this
7802  def get_version_info(self):
7803  """get_version_info(PairConstraint self) -> VersionInfo"""
7804  return _IMP_core.PairConstraint_get_version_info(self)
7805 
7806  def __str__(self):
7807  """__str__(PairConstraint self) -> std::string"""
7808  return _IMP_core.PairConstraint___str__(self)
7809 
7810  def __repr__(self):
7811  """__repr__(PairConstraint self) -> std::string"""
7812  return _IMP_core.PairConstraint___repr__(self)
7813 
7814  def get_from(o):
7815  return _object_cast_to_PairConstraint(o)
7816  get_from = staticmethod(get_from)
7817 
7818 PairConstraint_swigregister = _IMP_core.PairConstraint_swigregister
7819 PairConstraint_swigregister(PairConstraint)
7820 
7821 class TripletConstraint(IMP.kernel.Constraint):
7822  """Proxy of C++ IMP::core::TripletConstraint class"""
7823  __swig_setmethods__ = {}
7824  for _s in [IMP.kernel.Constraint]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
7825  __setattr__ = lambda self, name, value: _swig_setattr(self, TripletConstraint, name, value)
7826  __swig_getmethods__ = {}
7827  for _s in [IMP.kernel.Constraint]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
7828  __getattr__ = lambda self, name: _swig_getattr(self, TripletConstraint, name)
7829  def __init__(self, *args):
7830  """
7831  __init__(IMP::core::TripletConstraint self, TripletModifier before, TripletModifier after, IMP::kernel::ParticleTriplet const & vt,
7832  std::string name="TripletConstraint %1%") -> TripletConstraint
7833  __init__(IMP::core::TripletConstraint self, TripletModifier before, TripletModifier after, IMP::kernel::ParticleTriplet const & vt) -> TripletConstraint
7834  __init__(IMP::core::TripletConstraint self, TripletModifier before, TripletModifier after, Model m, IMP::kernel::ParticleIndexTriplet const & vt,
7835  std::string name="TripletConstraint %1%") -> TripletConstraint
7836  __init__(IMP::core::TripletConstraint self, TripletModifier before, TripletModifier after, Model m, IMP::kernel::ParticleIndexTriplet const & vt) -> TripletConstraint
7837  """
7838  this = _IMP_core.new_TripletConstraint(*args)
7839  try: self.this.append(this)
7840  except: self.this = this
7841  def get_version_info(self):
7842  """get_version_info(TripletConstraint self) -> VersionInfo"""
7843  return _IMP_core.TripletConstraint_get_version_info(self)
7844 
7845  def __str__(self):
7846  """__str__(TripletConstraint self) -> std::string"""
7847  return _IMP_core.TripletConstraint___str__(self)
7848 
7849  def __repr__(self):
7850  """__repr__(TripletConstraint self) -> std::string"""
7851  return _IMP_core.TripletConstraint___repr__(self)
7852 
7853  def get_from(o):
7854  return _object_cast_to_TripletConstraint(o)
7855  get_from = staticmethod(get_from)
7856 
7857 TripletConstraint_swigregister = _IMP_core.TripletConstraint_swigregister
7858 TripletConstraint_swigregister(TripletConstraint)
7859 
7860 class QuadConstraint(IMP.kernel.Constraint):
7861  """Proxy of C++ IMP::core::QuadConstraint class"""
7862  __swig_setmethods__ = {}
7863  for _s in [IMP.kernel.Constraint]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
7864  __setattr__ = lambda self, name, value: _swig_setattr(self, QuadConstraint, name, value)
7865  __swig_getmethods__ = {}
7866  for _s in [IMP.kernel.Constraint]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
7867  __getattr__ = lambda self, name: _swig_getattr(self, QuadConstraint, name)
7868  def __init__(self, *args):
7869  """
7870  __init__(IMP::core::QuadConstraint self, QuadModifier before, QuadModifier after, IMP::kernel::ParticleQuad const & vt, std::string name="QuadConstraint %1%") -> QuadConstraint
7871  __init__(IMP::core::QuadConstraint self, QuadModifier before, QuadModifier after, IMP::kernel::ParticleQuad const & vt) -> QuadConstraint
7872  __init__(IMP::core::QuadConstraint self, QuadModifier before, QuadModifier after, Model m, IMP::kernel::ParticleIndexQuad const & vt,
7873  std::string name="QuadConstraint %1%") -> QuadConstraint
7874  __init__(IMP::core::QuadConstraint self, QuadModifier before, QuadModifier after, Model m, IMP::kernel::ParticleIndexQuad const & vt) -> QuadConstraint
7875  """
7876  this = _IMP_core.new_QuadConstraint(*args)
7877  try: self.this.append(this)
7878  except: self.this = this
7879  def get_version_info(self):
7880  """get_version_info(QuadConstraint self) -> VersionInfo"""
7881  return _IMP_core.QuadConstraint_get_version_info(self)
7882 
7883  def __str__(self):
7884  """__str__(QuadConstraint self) -> std::string"""
7885  return _IMP_core.QuadConstraint___str__(self)
7886 
7887  def __repr__(self):
7888  """__repr__(QuadConstraint self) -> std::string"""
7889  return _IMP_core.QuadConstraint___repr__(self)
7890 
7891  def get_from(o):
7892  return _object_cast_to_QuadConstraint(o)
7893  get_from = staticmethod(get_from)
7894 
7895 QuadConstraint_swigregister = _IMP_core.QuadConstraint_swigregister
7896 QuadConstraint_swigregister(QuadConstraint)
7897 
7898 class ConstantSingletonPredicate(IMP.kernel.SingletonPredicate):
7899  """Proxy of C++ IMP::core::ConstantSingletonPredicate class"""
7900  __swig_setmethods__ = {}
7901  for _s in [IMP.kernel.SingletonPredicate]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
7902  __setattr__ = lambda self, name, value: _swig_setattr(self, ConstantSingletonPredicate, name, value)
7903  __swig_getmethods__ = {}
7904  for _s in [IMP.kernel.SingletonPredicate]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
7905  __getattr__ = lambda self, name: _swig_getattr(self, ConstantSingletonPredicate, name)
7906  def __init__(self, *args):
7907  """
7908  __init__(IMP::core::ConstantSingletonPredicate self, int v, std::string name="ConstSingletonPredicate%1%") -> ConstantSingletonPredicate
7909  __init__(IMP::core::ConstantSingletonPredicate self, int v) -> ConstantSingletonPredicate
7910  """
7911  this = _IMP_core.new_ConstantSingletonPredicate(*args)
7912  try: self.this.append(this)
7913  except: self.this = this
7914  def do_get_inputs(self, *args):
7915  """do_get_inputs(ConstantSingletonPredicate self, Model arg2, IMP::kernel::ParticleIndexes const & arg3) -> IMP::kernel::ModelObjectsTemp"""
7916  return _IMP_core.ConstantSingletonPredicate_do_get_inputs(self, *args)
7917 
7918  def get_value(self, *args):
7919  """
7920  get_value(ConstantSingletonPredicate self, Particle a) -> int
7921  get_value(ConstantSingletonPredicate self, IMP::kernel::ParticlesTemp const & o) -> IMP::Ints
7922  """
7923  return _IMP_core.ConstantSingletonPredicate_get_value(self, *args)
7924 
7925  def get_value_index(self, *args):
7926  """
7927  get_value_index(ConstantSingletonPredicate self, Model arg2, IMP::kernel::ParticleIndex arg3) -> int
7928  get_value_index(ConstantSingletonPredicate self, Model m, IMP::kernel::ParticleIndexes const & o) -> IMP::Ints
7929  """
7930  return _IMP_core.ConstantSingletonPredicate_get_value_index(self, *args)
7931 
7932  def get_version_info(self):
7933  """get_version_info(ConstantSingletonPredicate self) -> VersionInfo"""
7934  return _IMP_core.ConstantSingletonPredicate_get_version_info(self)
7935 
7936  def __str__(self):
7937  """__str__(ConstantSingletonPredicate self) -> std::string"""
7938  return _IMP_core.ConstantSingletonPredicate___str__(self)
7939 
7940  def __repr__(self):
7941  """__repr__(ConstantSingletonPredicate self) -> std::string"""
7942  return _IMP_core.ConstantSingletonPredicate___repr__(self)
7943 
7944  def get_from(o):
7945  return _object_cast_to_ConstantSingletonPredicate(o)
7946  get_from = staticmethod(get_from)
7947 
7948 ConstantSingletonPredicate_swigregister = _IMP_core.ConstantSingletonPredicate_swigregister
7949 ConstantSingletonPredicate_swigregister(ConstantSingletonPredicate)
7950 
7951 class UnorderedTypeSingletonPredicate(IMP.kernel.SingletonPredicate):
7952  """Proxy of C++ IMP::core::UnorderedTypeSingletonPredicate class"""
7953  __swig_setmethods__ = {}
7954  for _s in [IMP.kernel.SingletonPredicate]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
7955  __setattr__ = lambda self, name, value: _swig_setattr(self, UnorderedTypeSingletonPredicate, name, value)
7956  __swig_getmethods__ = {}
7957  for _s in [IMP.kernel.SingletonPredicate]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
7958  __getattr__ = lambda self, name: _swig_getattr(self, UnorderedTypeSingletonPredicate, name)
7959  def __init__(self, name="UnorderedTypeSingletonPredicate%1%"):
7960  """
7961  __init__(IMP::core::UnorderedTypeSingletonPredicate self, std::string name="UnorderedTypeSingletonPredicate%1%") -> UnorderedTypeSingletonPredicate
7962  __init__(IMP::core::UnorderedTypeSingletonPredicate self) -> UnorderedTypeSingletonPredicate
7963  """
7964  this = _IMP_core.new_UnorderedTypeSingletonPredicate(name)
7965  try: self.this.append(this)
7966  except: self.this = this
7967  def do_get_inputs(self, *args):
7968  """do_get_inputs(UnorderedTypeSingletonPredicate self, Model m, IMP::kernel::ParticleIndexes const & pis) -> IMP::kernel::ModelObjectsTemp"""
7969  return _IMP_core.UnorderedTypeSingletonPredicate_do_get_inputs(self, *args)
7970 
7971  def get_value(self, *args):
7972  """
7973  get_value(UnorderedTypeSingletonPredicate self, Particle a) -> int
7974  get_value(UnorderedTypeSingletonPredicate self, IMP::kernel::ParticlesTemp const & o) -> IMP::Ints
7975  """
7976  return _IMP_core.UnorderedTypeSingletonPredicate_get_value(self, *args)
7977 
7978  def get_value_index(self, *args):
7979  """
7980  get_value_index(UnorderedTypeSingletonPredicate self, Model m, IMP::kernel::ParticleIndex pi) -> int
7981  get_value_index(UnorderedTypeSingletonPredicate self, Model m, IMP::kernel::ParticleIndexes const & o) -> IMP::Ints
7982  """
7983  return _IMP_core.UnorderedTypeSingletonPredicate_get_value_index(self, *args)
7984 
7985  def get_version_info(self):
7986  """get_version_info(UnorderedTypeSingletonPredicate self) -> VersionInfo"""
7987  return _IMP_core.UnorderedTypeSingletonPredicate_get_version_info(self)
7988 
7989  def __str__(self):
7990  """__str__(UnorderedTypeSingletonPredicate self) -> std::string"""
7991  return _IMP_core.UnorderedTypeSingletonPredicate___str__(self)
7992 
7993  def __repr__(self):
7994  """__repr__(UnorderedTypeSingletonPredicate self) -> std::string"""
7995  return _IMP_core.UnorderedTypeSingletonPredicate___repr__(self)
7996 
7997  def get_from(o):
7998  return _object_cast_to_UnorderedTypeSingletonPredicate(o)
7999  get_from = staticmethod(get_from)
8000 
8001 UnorderedTypeSingletonPredicate_swigregister = _IMP_core.UnorderedTypeSingletonPredicate_swigregister
8002 UnorderedTypeSingletonPredicate_swigregister(UnorderedTypeSingletonPredicate)
8003 
8004 class OrderedTypeSingletonPredicate(IMP.kernel.SingletonPredicate):
8005  """Proxy of C++ IMP::core::OrderedTypeSingletonPredicate class"""
8006  __swig_setmethods__ = {}
8007  for _s in [IMP.kernel.SingletonPredicate]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
8008  __setattr__ = lambda self, name, value: _swig_setattr(self, OrderedTypeSingletonPredicate, name, value)
8009  __swig_getmethods__ = {}
8010  for _s in [IMP.kernel.SingletonPredicate]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
8011  __getattr__ = lambda self, name: _swig_getattr(self, OrderedTypeSingletonPredicate, name)
8012  def __init__(self, name="OrderedTypeSingletonPredicate%1%"):
8013  """
8014  __init__(IMP::core::OrderedTypeSingletonPredicate self, std::string name="OrderedTypeSingletonPredicate%1%") -> OrderedTypeSingletonPredicate
8015  __init__(IMP::core::OrderedTypeSingletonPredicate self) -> OrderedTypeSingletonPredicate
8016  """
8017  this = _IMP_core.new_OrderedTypeSingletonPredicate(name)
8018  try: self.this.append(this)
8019  except: self.this = this
8020  def do_get_inputs(self, *args):
8021  """do_get_inputs(OrderedTypeSingletonPredicate self, Model m, IMP::kernel::ParticleIndexes const & pis) -> IMP::kernel::ModelObjectsTemp"""
8022  return _IMP_core.OrderedTypeSingletonPredicate_do_get_inputs(self, *args)
8023 
8024  def get_value(self, *args):
8025  """
8026  get_value(OrderedTypeSingletonPredicate self, IMP::core::ParticleTypes const & types) -> int
8027  get_value(OrderedTypeSingletonPredicate self, Particle a) -> int
8028  get_value(OrderedTypeSingletonPredicate self, IMP::kernel::ParticlesTemp const & o) -> IMP::Ints
8029  """
8030  return _IMP_core.OrderedTypeSingletonPredicate_get_value(self, *args)
8031 
8032  def get_value_index(self, *args):
8033  """
8034  get_value_index(OrderedTypeSingletonPredicate self, Model m, IMP::kernel::ParticleIndex pi) -> int
8035  get_value_index(OrderedTypeSingletonPredicate self, Model m, IMP::kernel::ParticleIndexes const & o) -> IMP::Ints
8036  """
8037  return _IMP_core.OrderedTypeSingletonPredicate_get_value_index(self, *args)
8038 
8039  def get_version_info(self):
8040  """get_version_info(OrderedTypeSingletonPredicate self) -> VersionInfo"""
8041  return _IMP_core.OrderedTypeSingletonPredicate_get_version_info(self)
8042 
8043  def __str__(self):
8044  """__str__(OrderedTypeSingletonPredicate self) -> std::string"""
8045  return _IMP_core.OrderedTypeSingletonPredicate___str__(self)
8046 
8047  def __repr__(self):
8048  """__repr__(OrderedTypeSingletonPredicate self) -> std::string"""
8049  return _IMP_core.OrderedTypeSingletonPredicate___repr__(self)
8050 
8051  def get_from(o):
8052  return _object_cast_to_OrderedTypeSingletonPredicate(o)
8053  get_from = staticmethod(get_from)
8054 
8055 OrderedTypeSingletonPredicate_swigregister = _IMP_core.OrderedTypeSingletonPredicate_swigregister
8056 OrderedTypeSingletonPredicate_swigregister(OrderedTypeSingletonPredicate)
8057 
8058 class AllSameSingletonPredicate(IMP.kernel.SingletonPredicate):
8059  """Proxy of C++ IMP::core::AllSameSingletonPredicate class"""
8060  __swig_setmethods__ = {}
8061  for _s in [IMP.kernel.SingletonPredicate]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
8062  __setattr__ = lambda self, name, value: _swig_setattr(self, AllSameSingletonPredicate, name, value)
8063  __swig_getmethods__ = {}
8064  for _s in [IMP.kernel.SingletonPredicate]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
8065  __getattr__ = lambda self, name: _swig_getattr(self, AllSameSingletonPredicate, name)
8066  def __init__(self, name="AllSameSingletonPredicate%1%"):
8067  """
8068  __init__(IMP::core::AllSameSingletonPredicate self, std::string name="AllSameSingletonPredicate%1%") -> AllSameSingletonPredicate
8069  __init__(IMP::core::AllSameSingletonPredicate self) -> AllSameSingletonPredicate
8070  """
8071  this = _IMP_core.new_AllSameSingletonPredicate(name)
8072  try: self.this.append(this)
8073  except: self.this = this
8074  def do_get_inputs(self, *args):
8075  """do_get_inputs(AllSameSingletonPredicate self, Model arg2, IMP::kernel::ParticleIndexes const & arg3) -> IMP::kernel::ModelObjectsTemp"""
8076  return _IMP_core.AllSameSingletonPredicate_do_get_inputs(self, *args)
8077 
8078  def get_value(self, *args):
8079  """
8080  get_value(AllSameSingletonPredicate self, Particle a) -> int
8081  get_value(AllSameSingletonPredicate self, IMP::kernel::ParticlesTemp const & o) -> IMP::Ints
8082  """
8083  return _IMP_core.AllSameSingletonPredicate_get_value(self, *args)
8084 
8085  def get_value_index(self, *args):
8086  """
8087  get_value_index(AllSameSingletonPredicate self, Model m, IMP::kernel::ParticleIndex pi) -> int
8088  get_value_index(AllSameSingletonPredicate self, Model m, IMP::kernel::ParticleIndexes const & o) -> IMP::Ints
8089  """
8090  return _IMP_core.AllSameSingletonPredicate_get_value_index(self, *args)
8091 
8092  def get_version_info(self):
8093  """get_version_info(AllSameSingletonPredicate self) -> VersionInfo"""
8094  return _IMP_core.AllSameSingletonPredicate_get_version_info(self)
8095 
8096  def __str__(self):
8097  """__str__(AllSameSingletonPredicate self) -> std::string"""
8098  return _IMP_core.AllSameSingletonPredicate___str__(self)
8099 
8100  def __repr__(self):
8101  """__repr__(AllSameSingletonPredicate self) -> std::string"""
8102  return _IMP_core.AllSameSingletonPredicate___repr__(self)
8103 
8104  def get_from(o):
8105  return _object_cast_to_AllSameSingletonPredicate(o)
8106  get_from = staticmethod(get_from)
8107 
8108 AllSameSingletonPredicate_swigregister = _IMP_core.AllSameSingletonPredicate_swigregister
8109 AllSameSingletonPredicate_swigregister(AllSameSingletonPredicate)
8110 
8111 class CoinFlipSingletonPredicate(IMP.kernel.SingletonPredicate):
8112  """Proxy of C++ IMP::core::CoinFlipSingletonPredicate class"""
8113  __swig_setmethods__ = {}
8114  for _s in [IMP.kernel.SingletonPredicate]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
8115  __setattr__ = lambda self, name, value: _swig_setattr(self, CoinFlipSingletonPredicate, name, value)
8116  __swig_getmethods__ = {}
8117  for _s in [IMP.kernel.SingletonPredicate]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
8118  __getattr__ = lambda self, name: _swig_getattr(self, CoinFlipSingletonPredicate, name)
8119  def __init__(self, *args):
8120  """
8121  __init__(IMP::core::CoinFlipSingletonPredicate self, double p, std::string name="CoinFlipSingletonPredicate%1%") -> CoinFlipSingletonPredicate
8122  __init__(IMP::core::CoinFlipSingletonPredicate self, double p) -> CoinFlipSingletonPredicate
8123  """
8124  this = _IMP_core.new_CoinFlipSingletonPredicate(*args)
8125  try: self.this.append(this)
8126  except: self.this = this
8127  def do_get_inputs(self, *args):
8128  """do_get_inputs(CoinFlipSingletonPredicate self, Model arg2, IMP::kernel::ParticleIndexes const & arg3) -> IMP::kernel::ModelObjectsTemp"""
8129  return _IMP_core.CoinFlipSingletonPredicate_do_get_inputs(self, *args)
8130 
8131  def get_value(self, *args):
8132  """
8133  get_value(CoinFlipSingletonPredicate self, Particle a) -> int
8134  get_value(CoinFlipSingletonPredicate self, IMP::kernel::ParticlesTemp const & o) -> IMP::Ints
8135  """
8136  return _IMP_core.CoinFlipSingletonPredicate_get_value(self, *args)
8137 
8138  def get_value_index(self, *args):
8139  """
8140  get_value_index(CoinFlipSingletonPredicate self, Model arg2, IMP::kernel::ParticleIndex arg3) -> int
8141  get_value_index(CoinFlipSingletonPredicate self, Model m, IMP::kernel::ParticleIndexes const & o) -> IMP::Ints
8142  """
8143  return _IMP_core.CoinFlipSingletonPredicate_get_value_index(self, *args)
8144 
8145  def get_version_info(self):
8146  """get_version_info(CoinFlipSingletonPredicate self) -> VersionInfo"""
8147  return _IMP_core.CoinFlipSingletonPredicate_get_version_info(self)
8148 
8149  def __str__(self):
8150  """__str__(CoinFlipSingletonPredicate self) -> std::string"""
8151  return _IMP_core.CoinFlipSingletonPredicate___str__(self)
8152 
8153  def __repr__(self):
8154  """__repr__(CoinFlipSingletonPredicate self) -> std::string"""
8155  return _IMP_core.CoinFlipSingletonPredicate___repr__(self)
8156 
8157  def get_from(o):
8158  return _object_cast_to_CoinFlipSingletonPredicate(o)
8159  get_from = staticmethod(get_from)
8160 
8161 CoinFlipSingletonPredicate_swigregister = _IMP_core.CoinFlipSingletonPredicate_swigregister
8162 CoinFlipSingletonPredicate_swigregister(CoinFlipSingletonPredicate)
8163 
8164 class ConstantPairPredicate(IMP.kernel.PairPredicate):
8165  """Proxy of C++ IMP::core::ConstantPairPredicate class"""
8166  __swig_setmethods__ = {}
8167  for _s in [IMP.kernel.PairPredicate]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
8168  __setattr__ = lambda self, name, value: _swig_setattr(self, ConstantPairPredicate, name, value)
8169  __swig_getmethods__ = {}
8170  for _s in [IMP.kernel.PairPredicate]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
8171  __getattr__ = lambda self, name: _swig_getattr(self, ConstantPairPredicate, name)
8172  def __init__(self, *args):
8173  """
8174  __init__(IMP::core::ConstantPairPredicate self, int v, std::string name="ConstPairPredicate%1%") -> ConstantPairPredicate
8175  __init__(IMP::core::ConstantPairPredicate self, int v) -> ConstantPairPredicate
8176  """
8177  this = _IMP_core.new_ConstantPairPredicate(*args)
8178  try: self.this.append(this)
8179  except: self.this = this
8180  def do_get_inputs(self, *args):
8181  """do_get_inputs(ConstantPairPredicate self, Model arg2, IMP::kernel::ParticleIndexes const & arg3) -> IMP::kernel::ModelObjectsTemp"""
8182  return _IMP_core.ConstantPairPredicate_do_get_inputs(self, *args)
8183 
8184  def get_value(self, *args):
8185  """
8186  get_value(ConstantPairPredicate self, IMP::kernel::ParticlePair const & a) -> int
8187  get_value(ConstantPairPredicate self, IMP::kernel::ParticlePairsTemp const & o) -> IMP::Ints
8188  """
8189  return _IMP_core.ConstantPairPredicate_get_value(self, *args)
8190 
8191  def get_value_index(self, *args):
8192  """
8193  get_value_index(ConstantPairPredicate self, Model arg2, IMP::kernel::ParticleIndexPair const & arg3) -> int
8194  get_value_index(ConstantPairPredicate self, Model m, IMP::kernel::ParticleIndexPairs const & o) -> IMP::Ints
8195  """
8196  return _IMP_core.ConstantPairPredicate_get_value_index(self, *args)
8197 
8198  def get_version_info(self):
8199  """get_version_info(ConstantPairPredicate self) -> VersionInfo"""
8200  return _IMP_core.ConstantPairPredicate_get_version_info(self)
8201 
8202  def __str__(self):
8203  """__str__(ConstantPairPredicate self) -> std::string"""
8204  return _IMP_core.ConstantPairPredicate___str__(self)
8205 
8206  def __repr__(self):
8207  """__repr__(ConstantPairPredicate self) -> std::string"""
8208  return _IMP_core.ConstantPairPredicate___repr__(self)
8209 
8210  def get_from(o):
8211  return _object_cast_to_ConstantPairPredicate(o)
8212  get_from = staticmethod(get_from)
8213 
8214 ConstantPairPredicate_swigregister = _IMP_core.ConstantPairPredicate_swigregister
8215 ConstantPairPredicate_swigregister(ConstantPairPredicate)
8216 
8217 class UnorderedTypePairPredicate(IMP.kernel.PairPredicate):
8218  """Proxy of C++ IMP::core::UnorderedTypePairPredicate class"""
8219  __swig_setmethods__ = {}
8220  for _s in [IMP.kernel.PairPredicate]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
8221  __setattr__ = lambda self, name, value: _swig_setattr(self, UnorderedTypePairPredicate, name, value)
8222  __swig_getmethods__ = {}
8223  for _s in [IMP.kernel.PairPredicate]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
8224  __getattr__ = lambda self, name: _swig_getattr(self, UnorderedTypePairPredicate, name)
8225  def __init__(self, name="UnorderedTypePairPredicate%1%"):
8226  """
8227  __init__(IMP::core::UnorderedTypePairPredicate self, std::string name="UnorderedTypePairPredicate%1%") -> UnorderedTypePairPredicate
8228  __init__(IMP::core::UnorderedTypePairPredicate self) -> UnorderedTypePairPredicate
8229  """
8230  this = _IMP_core.new_UnorderedTypePairPredicate(name)
8231  try: self.this.append(this)
8232  except: self.this = this
8233  def do_get_inputs(self, *args):
8234  """do_get_inputs(UnorderedTypePairPredicate self, Model m, IMP::kernel::ParticleIndexes const & pis) -> IMP::kernel::ModelObjectsTemp"""
8235  return _IMP_core.UnorderedTypePairPredicate_do_get_inputs(self, *args)
8236 
8237  def get_value(self, *args):
8238  """
8239  get_value(UnorderedTypePairPredicate self, IMP::kernel::ParticlePair const & a) -> int
8240  get_value(UnorderedTypePairPredicate self, IMP::kernel::ParticlePairsTemp const & o) -> IMP::Ints
8241  """
8242  return _IMP_core.UnorderedTypePairPredicate_get_value(self, *args)
8243 
8244  def get_value_index(self, *args):
8245  """
8246  get_value_index(UnorderedTypePairPredicate self, Model m, IMP::kernel::ParticleIndexPair const & pi) -> int
8247  get_value_index(UnorderedTypePairPredicate self, Model m, IMP::kernel::ParticleIndexPairs const & o) -> IMP::Ints
8248  """
8249  return _IMP_core.UnorderedTypePairPredicate_get_value_index(self, *args)
8250 
8251  def get_version_info(self):
8252  """get_version_info(UnorderedTypePairPredicate self) -> VersionInfo"""
8253  return _IMP_core.UnorderedTypePairPredicate_get_version_info(self)
8254 
8255  def __str__(self):
8256  """__str__(UnorderedTypePairPredicate self) -> std::string"""
8257  return _IMP_core.UnorderedTypePairPredicate___str__(self)
8258 
8259  def __repr__(self):
8260  """__repr__(UnorderedTypePairPredicate self) -> std::string"""
8261  return _IMP_core.UnorderedTypePairPredicate___repr__(self)
8262 
8263  def get_from(o):
8264  return _object_cast_to_UnorderedTypePairPredicate(o)
8265  get_from = staticmethod(get_from)
8266 
8267 UnorderedTypePairPredicate_swigregister = _IMP_core.UnorderedTypePairPredicate_swigregister
8268 UnorderedTypePairPredicate_swigregister(UnorderedTypePairPredicate)
8269 
8270 class OrderedTypePairPredicate(IMP.kernel.PairPredicate):
8271  """Proxy of C++ IMP::core::OrderedTypePairPredicate class"""
8272  __swig_setmethods__ = {}
8273  for _s in [IMP.kernel.PairPredicate]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
8274  __setattr__ = lambda self, name, value: _swig_setattr(self, OrderedTypePairPredicate, name, value)
8275  __swig_getmethods__ = {}
8276  for _s in [IMP.kernel.PairPredicate]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
8277  __getattr__ = lambda self, name: _swig_getattr(self, OrderedTypePairPredicate, name)
8278  def __init__(self, name="OrderedTypePairPredicate%1%"):
8279  """
8280  __init__(IMP::core::OrderedTypePairPredicate self, std::string name="OrderedTypePairPredicate%1%") -> OrderedTypePairPredicate
8281  __init__(IMP::core::OrderedTypePairPredicate self) -> OrderedTypePairPredicate
8282  """
8283  this = _IMP_core.new_OrderedTypePairPredicate(name)
8284  try: self.this.append(this)
8285  except: self.this = this
8286  def do_get_inputs(self, *args):
8287  """do_get_inputs(OrderedTypePairPredicate self, Model m, IMP::kernel::ParticleIndexes const & pis) -> IMP::kernel::ModelObjectsTemp"""
8288  return _IMP_core.OrderedTypePairPredicate_do_get_inputs(self, *args)
8289 
8290  def get_value(self, *args):
8291  """
8292  get_value(OrderedTypePairPredicate self, IMP::core::ParticleTypes const & types) -> int
8293  get_value(OrderedTypePairPredicate self, IMP::kernel::ParticlePair const & a) -> int
8294  get_value(OrderedTypePairPredicate self, IMP::kernel::ParticlePairsTemp const & o) -> IMP::Ints
8295  """
8296  return _IMP_core.OrderedTypePairPredicate_get_value(self, *args)
8297 
8298  def get_value_index(self, *args):
8299  """
8300  get_value_index(OrderedTypePairPredicate self, Model m, IMP::kernel::ParticleIndexPair const & pi) -> int
8301  get_value_index(OrderedTypePairPredicate self, Model m, IMP::kernel::ParticleIndexPairs const & o) -> IMP::Ints
8302  """
8303  return _IMP_core.OrderedTypePairPredicate_get_value_index(self, *args)
8304 
8305  def get_version_info(self):
8306  """get_version_info(OrderedTypePairPredicate self) -> VersionInfo"""
8307  return _IMP_core.OrderedTypePairPredicate_get_version_info(self)
8308 
8309  def __str__(self):
8310  """__str__(OrderedTypePairPredicate self) -> std::string"""
8311  return _IMP_core.OrderedTypePairPredicate___str__(self)
8312 
8313  def __repr__(self):
8314  """__repr__(OrderedTypePairPredicate self) -> std::string"""
8315  return _IMP_core.OrderedTypePairPredicate___repr__(self)
8316 
8317  def get_from(o):
8318  return _object_cast_to_OrderedTypePairPredicate(o)
8319  get_from = staticmethod(get_from)
8320 
8321 OrderedTypePairPredicate_swigregister = _IMP_core.OrderedTypePairPredicate_swigregister
8322 OrderedTypePairPredicate_swigregister(OrderedTypePairPredicate)
8323 
8324 class AllSamePairPredicate(IMP.kernel.PairPredicate):
8325  """Proxy of C++ IMP::core::AllSamePairPredicate class"""
8326  __swig_setmethods__ = {}
8327  for _s in [IMP.kernel.PairPredicate]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
8328  __setattr__ = lambda self, name, value: _swig_setattr(self, AllSamePairPredicate, name, value)
8329  __swig_getmethods__ = {}
8330  for _s in [IMP.kernel.PairPredicate]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
8331  __getattr__ = lambda self, name: _swig_getattr(self, AllSamePairPredicate, name)
8332  def __init__(self, name="AllSamePairPredicate%1%"):
8333  """
8334  __init__(IMP::core::AllSamePairPredicate self, std::string name="AllSamePairPredicate%1%") -> AllSamePairPredicate
8335  __init__(IMP::core::AllSamePairPredicate self) -> AllSamePairPredicate
8336  """
8337  this = _IMP_core.new_AllSamePairPredicate(name)
8338  try: self.this.append(this)
8339  except: self.this = this
8340  def do_get_inputs(self, *args):
8341  """do_get_inputs(AllSamePairPredicate self, Model arg2, IMP::kernel::ParticleIndexes const & arg3) -> IMP::kernel::ModelObjectsTemp"""
8342  return _IMP_core.AllSamePairPredicate_do_get_inputs(self, *args)
8343 
8344  def get_value(self, *args):
8345  """
8346  get_value(AllSamePairPredicate self, IMP::kernel::ParticlePair const & a) -> int
8347  get_value(AllSamePairPredicate self, IMP::kernel::ParticlePairsTemp const & o) -> IMP::Ints
8348  """
8349  return _IMP_core.AllSamePairPredicate_get_value(self, *args)
8350 
8351  def get_value_index(self, *args):
8352  """
8353  get_value_index(AllSamePairPredicate self, Model m, IMP::kernel::ParticleIndexPair const & pi) -> int
8354  get_value_index(AllSamePairPredicate self, Model m, IMP::kernel::ParticleIndexPairs const & o) -> IMP::Ints
8355  """
8356  return _IMP_core.AllSamePairPredicate_get_value_index(self, *args)
8357 
8358  def get_version_info(self):
8359  """get_version_info(AllSamePairPredicate self) -> VersionInfo"""
8360  return _IMP_core.AllSamePairPredicate_get_version_info(self)
8361 
8362  def __str__(self):
8363  """__str__(AllSamePairPredicate self) -> std::string"""
8364  return _IMP_core.AllSamePairPredicate___str__(self)
8365 
8366  def __repr__(self):
8367  """__repr__(AllSamePairPredicate self) -> std::string"""
8368  return _IMP_core.AllSamePairPredicate___repr__(self)
8369 
8370  def get_from(o):
8371  return _object_cast_to_AllSamePairPredicate(o)
8372  get_from = staticmethod(get_from)
8373 
8374 AllSamePairPredicate_swigregister = _IMP_core.AllSamePairPredicate_swigregister
8375 AllSamePairPredicate_swigregister(AllSamePairPredicate)
8376 
8377 class CoinFlipPairPredicate(IMP.kernel.PairPredicate):
8378  """Proxy of C++ IMP::core::CoinFlipPairPredicate class"""
8379  __swig_setmethods__ = {}
8380  for _s in [IMP.kernel.PairPredicate]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
8381  __setattr__ = lambda self, name, value: _swig_setattr(self, CoinFlipPairPredicate, name, value)
8382  __swig_getmethods__ = {}
8383  for _s in [IMP.kernel.PairPredicate]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
8384  __getattr__ = lambda self, name: _swig_getattr(self, CoinFlipPairPredicate, name)
8385  def __init__(self, *args):
8386  """
8387  __init__(IMP::core::CoinFlipPairPredicate self, double p, std::string name="CoinFlipPairPredicate%1%") -> CoinFlipPairPredicate
8388  __init__(IMP::core::CoinFlipPairPredicate self, double p) -> CoinFlipPairPredicate
8389  """
8390  this = _IMP_core.new_CoinFlipPairPredicate(*args)
8391  try: self.this.append(this)
8392  except: self.this = this
8393  def do_get_inputs(self, *args):
8394  """do_get_inputs(CoinFlipPairPredicate self, Model arg2, IMP::kernel::ParticleIndexes const & arg3) -> IMP::kernel::ModelObjectsTemp"""
8395  return _IMP_core.CoinFlipPairPredicate_do_get_inputs(self, *args)
8396 
8397  def get_value(self, *args):
8398  """
8399  get_value(CoinFlipPairPredicate self, IMP::kernel::ParticlePair const & a) -> int
8400  get_value(CoinFlipPairPredicate self, IMP::kernel::ParticlePairsTemp const & o) -> IMP::Ints
8401  """
8402  return _IMP_core.CoinFlipPairPredicate_get_value(self, *args)
8403 
8404  def get_value_index(self, *args):
8405  """
8406  get_value_index(CoinFlipPairPredicate self, Model arg2, IMP::kernel::ParticleIndexPair const & arg3) -> int
8407  get_value_index(CoinFlipPairPredicate self, Model m, IMP::kernel::ParticleIndexPairs const & o) -> IMP::Ints
8408  """
8409  return _IMP_core.CoinFlipPairPredicate_get_value_index(self, *args)
8410 
8411  def get_version_info(self):
8412  """get_version_info(CoinFlipPairPredicate self) -> VersionInfo"""
8413  return _IMP_core.CoinFlipPairPredicate_get_version_info(self)
8414 
8415  def __str__(self):
8416  """__str__(CoinFlipPairPredicate self) -> std::string"""
8417  return _IMP_core.CoinFlipPairPredicate___str__(self)
8418 
8419  def __repr__(self):
8420  """__repr__(CoinFlipPairPredicate self) -> std::string"""
8421  return _IMP_core.CoinFlipPairPredicate___repr__(self)
8422 
8423  def get_from(o):
8424  return _object_cast_to_CoinFlipPairPredicate(o)
8425  get_from = staticmethod(get_from)
8426 
8427 CoinFlipPairPredicate_swigregister = _IMP_core.CoinFlipPairPredicate_swigregister
8428 CoinFlipPairPredicate_swigregister(CoinFlipPairPredicate)
8429 
8430 class ConstantTripletPredicate(IMP.kernel.TripletPredicate):
8431  """Proxy of C++ IMP::core::ConstantTripletPredicate class"""
8432  __swig_setmethods__ = {}
8433  for _s in [IMP.kernel.TripletPredicate]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
8434  __setattr__ = lambda self, name, value: _swig_setattr(self, ConstantTripletPredicate, name, value)
8435  __swig_getmethods__ = {}
8436  for _s in [IMP.kernel.TripletPredicate]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
8437  __getattr__ = lambda self, name: _swig_getattr(self, ConstantTripletPredicate, name)
8438  def __init__(self, *args):
8439  """
8440  __init__(IMP::core::ConstantTripletPredicate self, int v, std::string name="ConstTripletPredicate%1%") -> ConstantTripletPredicate
8441  __init__(IMP::core::ConstantTripletPredicate self, int v) -> ConstantTripletPredicate
8442  """
8443  this = _IMP_core.new_ConstantTripletPredicate(*args)
8444  try: self.this.append(this)
8445  except: self.this = this
8446  def do_get_inputs(self, *args):
8447  """do_get_inputs(ConstantTripletPredicate self, Model arg2, IMP::kernel::ParticleIndexes const & arg3) -> IMP::kernel::ModelObjectsTemp"""
8448  return _IMP_core.ConstantTripletPredicate_do_get_inputs(self, *args)
8449 
8450  def get_value(self, *args):
8451  """
8452  get_value(ConstantTripletPredicate self, IMP::kernel::ParticleTriplet const & a) -> int
8453  get_value(ConstantTripletPredicate self, IMP::kernel::ParticleTripletsTemp const & o) -> IMP::Ints
8454  """
8455  return _IMP_core.ConstantTripletPredicate_get_value(self, *args)
8456 
8457  def get_value_index(self, *args):
8458  """
8459  get_value_index(ConstantTripletPredicate self, Model arg2, IMP::kernel::ParticleIndexTriplet const & arg3) -> int
8460  get_value_index(ConstantTripletPredicate self, Model m, IMP::kernel::ParticleIndexTriplets const & o) -> IMP::Ints
8461  """
8462  return _IMP_core.ConstantTripletPredicate_get_value_index(self, *args)
8463 
8464  def get_version_info(self):
8465  """get_version_info(ConstantTripletPredicate self) -> VersionInfo"""
8466  return _IMP_core.ConstantTripletPredicate_get_version_info(self)
8467 
8468  def __str__(self):
8469  """__str__(ConstantTripletPredicate self) -> std::string"""
8470  return _IMP_core.ConstantTripletPredicate___str__(self)
8471 
8472  def __repr__(self):
8473  """__repr__(ConstantTripletPredicate self) -> std::string"""
8474  return _IMP_core.ConstantTripletPredicate___repr__(self)
8475 
8476  def get_from(o):
8477  return _object_cast_to_ConstantTripletPredicate(o)
8478  get_from = staticmethod(get_from)
8479 
8480 ConstantTripletPredicate_swigregister = _IMP_core.ConstantTripletPredicate_swigregister
8481 ConstantTripletPredicate_swigregister(ConstantTripletPredicate)
8482 
8483 class UnorderedTypeTripletPredicate(IMP.kernel.TripletPredicate):
8484  """Proxy of C++ IMP::core::UnorderedTypeTripletPredicate class"""
8485  __swig_setmethods__ = {}
8486  for _s in [IMP.kernel.TripletPredicate]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
8487  __setattr__ = lambda self, name, value: _swig_setattr(self, UnorderedTypeTripletPredicate, name, value)
8488  __swig_getmethods__ = {}
8489  for _s in [IMP.kernel.TripletPredicate]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
8490  __getattr__ = lambda self, name: _swig_getattr(self, UnorderedTypeTripletPredicate, name)
8491  def __init__(self, name="UnorderedTypeTripletPredicate%1%"):
8492  """
8493  __init__(IMP::core::UnorderedTypeTripletPredicate self, std::string name="UnorderedTypeTripletPredicate%1%") -> UnorderedTypeTripletPredicate
8494  __init__(IMP::core::UnorderedTypeTripletPredicate self) -> UnorderedTypeTripletPredicate
8495  """
8496  this = _IMP_core.new_UnorderedTypeTripletPredicate(name)
8497  try: self.this.append(this)
8498  except: self.this = this
8499  def do_get_inputs(self, *args):
8500  """do_get_inputs(UnorderedTypeTripletPredicate self, Model m, IMP::kernel::ParticleIndexes const & pis) -> IMP::kernel::ModelObjectsTemp"""
8501  return _IMP_core.UnorderedTypeTripletPredicate_do_get_inputs(self, *args)
8502 
8503  def get_value(self, *args):
8504  """
8505  get_value(UnorderedTypeTripletPredicate self, IMP::kernel::ParticleTriplet const & a) -> int
8506  get_value(UnorderedTypeTripletPredicate self, IMP::kernel::ParticleTripletsTemp const & o) -> IMP::Ints
8507  """
8508  return _IMP_core.UnorderedTypeTripletPredicate_get_value(self, *args)
8509 
8510  def get_value_index(self, *args):
8511  """
8512  get_value_index(UnorderedTypeTripletPredicate self, Model m, IMP::kernel::ParticleIndexTriplet const & pi) -> int
8513  get_value_index(UnorderedTypeTripletPredicate self, Model m, IMP::kernel::ParticleIndexTriplets const & o) -> IMP::Ints
8514  """
8515  return _IMP_core.UnorderedTypeTripletPredicate_get_value_index(self, *args)
8516 
8517  def get_version_info(self):
8518  """get_version_info(UnorderedTypeTripletPredicate self) -> VersionInfo"""
8519  return _IMP_core.UnorderedTypeTripletPredicate_get_version_info(self)
8520 
8521  def __str__(self):
8522  """__str__(UnorderedTypeTripletPredicate self) -> std::string"""
8523  return _IMP_core.UnorderedTypeTripletPredicate___str__(self)
8524 
8525  def __repr__(self):
8526  """__repr__(UnorderedTypeTripletPredicate self) -> std::string"""
8527  return _IMP_core.UnorderedTypeTripletPredicate___repr__(self)
8528 
8529  def get_from(o):
8530  return _object_cast_to_UnorderedTypeTripletPredicate(o)
8531  get_from = staticmethod(get_from)
8532 
8533 UnorderedTypeTripletPredicate_swigregister = _IMP_core.UnorderedTypeTripletPredicate_swigregister
8534 UnorderedTypeTripletPredicate_swigregister(UnorderedTypeTripletPredicate)
8535 
8536 class OrderedTypeTripletPredicate(IMP.kernel.TripletPredicate):
8537  """Proxy of C++ IMP::core::OrderedTypeTripletPredicate class"""
8538  __swig_setmethods__ = {}
8539  for _s in [IMP.kernel.TripletPredicate]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
8540  __setattr__ = lambda self, name, value: _swig_setattr(self, OrderedTypeTripletPredicate, name, value)
8541  __swig_getmethods__ = {}
8542  for _s in [IMP.kernel.TripletPredicate]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
8543  __getattr__ = lambda self, name: _swig_getattr(self, OrderedTypeTripletPredicate, name)
8544  def __init__(self, name="OrderedTypeTripletPredicate%1%"):
8545  """
8546  __init__(IMP::core::OrderedTypeTripletPredicate self, std::string name="OrderedTypeTripletPredicate%1%") -> OrderedTypeTripletPredicate
8547  __init__(IMP::core::OrderedTypeTripletPredicate self) -> OrderedTypeTripletPredicate
8548  """
8549  this = _IMP_core.new_OrderedTypeTripletPredicate(name)
8550  try: self.this.append(this)
8551  except: self.this = this
8552  def do_get_inputs(self, *args):
8553  """do_get_inputs(OrderedTypeTripletPredicate self, Model m, IMP::kernel::ParticleIndexes const & pis) -> IMP::kernel::ModelObjectsTemp"""
8554  return _IMP_core.OrderedTypeTripletPredicate_do_get_inputs(self, *args)
8555 
8556  def get_value(self, *args):
8557  """
8558  get_value(OrderedTypeTripletPredicate self, IMP::core::ParticleTypes const & types) -> int
8559  get_value(OrderedTypeTripletPredicate self, IMP::kernel::ParticleTriplet const & a) -> int
8560  get_value(OrderedTypeTripletPredicate self, IMP::kernel::ParticleTripletsTemp const & o) -> IMP::Ints
8561  """
8562  return _IMP_core.OrderedTypeTripletPredicate_get_value(self, *args)
8563 
8564  def get_value_index(self, *args):
8565  """
8566  get_value_index(OrderedTypeTripletPredicate self, Model m, IMP::kernel::ParticleIndexTriplet const & pi) -> int
8567  get_value_index(OrderedTypeTripletPredicate self, Model m, IMP::kernel::ParticleIndexTriplets const & o) -> IMP::Ints
8568  """
8569  return _IMP_core.OrderedTypeTripletPredicate_get_value_index(self, *args)
8570 
8571  def get_version_info(self):
8572  """get_version_info(OrderedTypeTripletPredicate self) -> VersionInfo"""
8573  return _IMP_core.OrderedTypeTripletPredicate_get_version_info(self)
8574 
8575  def __str__(self):
8576  """__str__(OrderedTypeTripletPredicate self) -> std::string"""
8577  return _IMP_core.OrderedTypeTripletPredicate___str__(self)
8578 
8579  def __repr__(self):
8580  """__repr__(OrderedTypeTripletPredicate self) -> std::string"""
8581  return _IMP_core.OrderedTypeTripletPredicate___repr__(self)
8582 
8583  def get_from(o):
8584  return _object_cast_to_OrderedTypeTripletPredicate(o)
8585  get_from = staticmethod(get_from)
8586 
8587 OrderedTypeTripletPredicate_swigregister = _IMP_core.OrderedTypeTripletPredicate_swigregister
8588 OrderedTypeTripletPredicate_swigregister(OrderedTypeTripletPredicate)
8589 
8590 class AllSameTripletPredicate(IMP.kernel.TripletPredicate):
8591  """Proxy of C++ IMP::core::AllSameTripletPredicate class"""
8592  __swig_setmethods__ = {}
8593  for _s in [IMP.kernel.TripletPredicate]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
8594  __setattr__ = lambda self, name, value: _swig_setattr(self, AllSameTripletPredicate, name, value)
8595  __swig_getmethods__ = {}
8596  for _s in [IMP.kernel.TripletPredicate]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
8597  __getattr__ = lambda self, name: _swig_getattr(self, AllSameTripletPredicate, name)
8598  def __init__(self, name="AllSameTripletPredicate%1%"):
8599  """
8600  __init__(IMP::core::AllSameTripletPredicate self, std::string name="AllSameTripletPredicate%1%") -> AllSameTripletPredicate
8601  __init__(IMP::core::AllSameTripletPredicate self) -> AllSameTripletPredicate
8602  """
8603  this = _IMP_core.new_AllSameTripletPredicate(name)
8604  try: self.this.append(this)
8605  except: self.this = this
8606  def do_get_inputs(self, *args):
8607  """do_get_inputs(AllSameTripletPredicate self, Model arg2, IMP::kernel::ParticleIndexes const & arg3) -> IMP::kernel::ModelObjectsTemp"""
8608  return _IMP_core.AllSameTripletPredicate_do_get_inputs(self, *args)
8609 
8610  def get_value(self, *args):
8611  """
8612  get_value(AllSameTripletPredicate self, IMP::kernel::ParticleTriplet const & a) -> int
8613  get_value(AllSameTripletPredicate self, IMP::kernel::ParticleTripletsTemp const & o) -> IMP::Ints
8614  """
8615  return _IMP_core.AllSameTripletPredicate_get_value(self, *args)
8616 
8617  def get_value_index(self, *args):
8618  """
8619  get_value_index(AllSameTripletPredicate self, Model m, IMP::kernel::ParticleIndexTriplet const & pi) -> int
8620  get_value_index(AllSameTripletPredicate self, Model m, IMP::kernel::ParticleIndexTriplets const & o) -> IMP::Ints
8621  """
8622  return _IMP_core.AllSameTripletPredicate_get_value_index(self, *args)
8623 
8624  def get_version_info(self):
8625  """get_version_info(AllSameTripletPredicate self) -> VersionInfo"""
8626  return _IMP_core.AllSameTripletPredicate_get_version_info(self)
8627 
8628  def __str__(self):
8629  """__str__(AllSameTripletPredicate self) -> std::string"""
8630  return _IMP_core.AllSameTripletPredicate___str__(self)
8631 
8632  def __repr__(self):
8633  """__repr__(AllSameTripletPredicate self) -> std::string"""
8634  return _IMP_core.AllSameTripletPredicate___repr__(self)
8635 
8636  def get_from(o):
8637  return _object_cast_to_AllSameTripletPredicate(o)
8638  get_from = staticmethod(get_from)
8639 
8640 AllSameTripletPredicate_swigregister = _IMP_core.AllSameTripletPredicate_swigregister
8641 AllSameTripletPredicate_swigregister(AllSameTripletPredicate)
8642 
8643 class CoinFlipTripletPredicate(IMP.kernel.TripletPredicate):
8644  """Proxy of C++ IMP::core::CoinFlipTripletPredicate class"""
8645  __swig_setmethods__ = {}
8646  for _s in [IMP.kernel.TripletPredicate]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
8647  __setattr__ = lambda self, name, value: _swig_setattr(self, CoinFlipTripletPredicate, name, value)
8648  __swig_getmethods__ = {}
8649  for _s in [IMP.kernel.TripletPredicate]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
8650  __getattr__ = lambda self, name: _swig_getattr(self, CoinFlipTripletPredicate, name)
8651  def __init__(self, *args):
8652  """
8653  __init__(IMP::core::CoinFlipTripletPredicate self, double p, std::string name="CoinFlipTripletPredicate%1%") -> CoinFlipTripletPredicate
8654  __init__(IMP::core::CoinFlipTripletPredicate self, double p) -> CoinFlipTripletPredicate
8655  """
8656  this = _IMP_core.new_CoinFlipTripletPredicate(*args)
8657  try: self.this.append(this)
8658  except: self.this = this
8659  def do_get_inputs(self, *args):
8660  """do_get_inputs(CoinFlipTripletPredicate self, Model arg2, IMP::kernel::ParticleIndexes const & arg3) -> IMP::kernel::ModelObjectsTemp"""
8661  return _IMP_core.CoinFlipTripletPredicate_do_get_inputs(self, *args)
8662 
8663  def get_value(self, *args):
8664  """
8665  get_value(CoinFlipTripletPredicate self, IMP::kernel::ParticleTriplet const & a) -> int
8666  get_value(CoinFlipTripletPredicate self, IMP::kernel::ParticleTripletsTemp const & o) -> IMP::Ints
8667  """
8668  return _IMP_core.CoinFlipTripletPredicate_get_value(self, *args)
8669 
8670  def get_value_index(self, *args):
8671  """
8672  get_value_index(CoinFlipTripletPredicate self, Model arg2, IMP::kernel::ParticleIndexTriplet const & arg3) -> int
8673  get_value_index(CoinFlipTripletPredicate self, Model m, IMP::kernel::ParticleIndexTriplets const & o) -> IMP::Ints
8674  """
8675  return _IMP_core.CoinFlipTripletPredicate_get_value_index(self, *args)
8676 
8677  def get_version_info(self):
8678  """get_version_info(CoinFlipTripletPredicate self) -> VersionInfo"""
8679  return _IMP_core.CoinFlipTripletPredicate_get_version_info(self)
8680 
8681  def __str__(self):
8682  """__str__(CoinFlipTripletPredicate self) -> std::string"""
8683  return _IMP_core.CoinFlipTripletPredicate___str__(self)
8684 
8685  def __repr__(self):
8686  """__repr__(CoinFlipTripletPredicate self) -> std::string"""
8687  return _IMP_core.CoinFlipTripletPredicate___repr__(self)
8688 
8689  def get_from(o):
8690  return _object_cast_to_CoinFlipTripletPredicate(o)
8691  get_from = staticmethod(get_from)
8692 
8693 CoinFlipTripletPredicate_swigregister = _IMP_core.CoinFlipTripletPredicate_swigregister
8694 CoinFlipTripletPredicate_swigregister(CoinFlipTripletPredicate)
8695 
8696 class ConstantQuadPredicate(IMP.kernel.QuadPredicate):
8697  """Proxy of C++ IMP::core::ConstantQuadPredicate class"""
8698  __swig_setmethods__ = {}
8699  for _s in [IMP.kernel.QuadPredicate]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
8700  __setattr__ = lambda self, name, value: _swig_setattr(self, ConstantQuadPredicate, name, value)
8701  __swig_getmethods__ = {}
8702  for _s in [IMP.kernel.QuadPredicate]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
8703  __getattr__ = lambda self, name: _swig_getattr(self, ConstantQuadPredicate, name)
8704  def __init__(self, *args):
8705  """
8706  __init__(IMP::core::ConstantQuadPredicate self, int v, std::string name="ConstQuadPredicate%1%") -> ConstantQuadPredicate
8707  __init__(IMP::core::ConstantQuadPredicate self, int v) -> ConstantQuadPredicate
8708  """
8709  this = _IMP_core.new_ConstantQuadPredicate(*args)
8710  try: self.this.append(this)
8711  except: self.this = this
8712  def do_get_inputs(self, *args):
8713  """do_get_inputs(ConstantQuadPredicate self, Model arg2, IMP::kernel::ParticleIndexes const & arg3) -> IMP::kernel::ModelObjectsTemp"""
8714  return _IMP_core.ConstantQuadPredicate_do_get_inputs(self, *args)
8715 
8716  def get_value(self, *args):
8717  """
8718  get_value(ConstantQuadPredicate self, IMP::kernel::ParticleQuad const & a) -> int
8719  get_value(ConstantQuadPredicate self, IMP::kernel::ParticleQuadsTemp const & o) -> IMP::Ints
8720  """
8721  return _IMP_core.ConstantQuadPredicate_get_value(self, *args)
8722 
8723  def get_value_index(self, *args):
8724  """
8725  get_value_index(ConstantQuadPredicate self, Model arg2, IMP::kernel::ParticleIndexQuad const & arg3) -> int
8726  get_value_index(ConstantQuadPredicate self, Model m, IMP::kernel::ParticleIndexQuads const & o) -> IMP::Ints
8727  """
8728  return _IMP_core.ConstantQuadPredicate_get_value_index(self, *args)
8729 
8730  def get_version_info(self):
8731  """get_version_info(ConstantQuadPredicate self) -> VersionInfo"""
8732  return _IMP_core.ConstantQuadPredicate_get_version_info(self)
8733 
8734  def __str__(self):
8735  """__str__(ConstantQuadPredicate self) -> std::string"""
8736  return _IMP_core.ConstantQuadPredicate___str__(self)
8737 
8738  def __repr__(self):
8739  """__repr__(ConstantQuadPredicate self) -> std::string"""
8740  return _IMP_core.ConstantQuadPredicate___repr__(self)
8741 
8742  def get_from(o):
8743  return _object_cast_to_ConstantQuadPredicate(o)
8744  get_from = staticmethod(get_from)
8745 
8746 ConstantQuadPredicate_swigregister = _IMP_core.ConstantQuadPredicate_swigregister
8747 ConstantQuadPredicate_swigregister(ConstantQuadPredicate)
8748 
8749 class UnorderedTypeQuadPredicate(IMP.kernel.QuadPredicate):
8750  """Proxy of C++ IMP::core::UnorderedTypeQuadPredicate class"""
8751  __swig_setmethods__ = {}
8752  for _s in [IMP.kernel.QuadPredicate]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
8753  __setattr__ = lambda self, name, value: _swig_setattr(self, UnorderedTypeQuadPredicate, name, value)
8754  __swig_getmethods__ = {}
8755  for _s in [IMP.kernel.QuadPredicate]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
8756  __getattr__ = lambda self, name: _swig_getattr(self, UnorderedTypeQuadPredicate, name)
8757  def __init__(self, name="UnorderedTypeQuadPredicate%1%"):
8758  """
8759  __init__(IMP::core::UnorderedTypeQuadPredicate self, std::string name="UnorderedTypeQuadPredicate%1%") -> UnorderedTypeQuadPredicate
8760  __init__(IMP::core::UnorderedTypeQuadPredicate self) -> UnorderedTypeQuadPredicate
8761  """
8762  this = _IMP_core.new_UnorderedTypeQuadPredicate(name)
8763  try: self.this.append(this)
8764  except: self.this = this
8765  def do_get_inputs(self, *args):
8766  """do_get_inputs(UnorderedTypeQuadPredicate self, Model m, IMP::kernel::ParticleIndexes const & pis) -> IMP::kernel::ModelObjectsTemp"""
8767  return _IMP_core.UnorderedTypeQuadPredicate_do_get_inputs(self, *args)
8768 
8769  def get_value(self, *args):
8770  """
8771  get_value(UnorderedTypeQuadPredicate self, IMP::kernel::ParticleQuad const & a) -> int
8772  get_value(UnorderedTypeQuadPredicate self, IMP::kernel::ParticleQuadsTemp const & o) -> IMP::Ints
8773  """
8774  return _IMP_core.UnorderedTypeQuadPredicate_get_value(self, *args)
8775 
8776  def get_value_index(self, *args):
8777  """
8778  get_value_index(UnorderedTypeQuadPredicate self, Model m, IMP::kernel::ParticleIndexQuad const & pi) -> int
8779  get_value_index(UnorderedTypeQuadPredicate self, Model m, IMP::kernel::ParticleIndexQuads const & o) -> IMP::Ints
8780  """
8781  return _IMP_core.UnorderedTypeQuadPredicate_get_value_index(self, *args)
8782 
8783  def get_version_info(self):
8784  """get_version_info(UnorderedTypeQuadPredicate self) -> VersionInfo"""
8785  return _IMP_core.UnorderedTypeQuadPredicate_get_version_info(self)
8786 
8787  def __str__(self):
8788  """__str__(UnorderedTypeQuadPredicate self) -> std::string"""
8789  return _IMP_core.UnorderedTypeQuadPredicate___str__(self)
8790 
8791  def __repr__(self):
8792  """__repr__(UnorderedTypeQuadPredicate self) -> std::string"""
8793  return _IMP_core.UnorderedTypeQuadPredicate___repr__(self)
8794 
8795  def get_from(o):
8796  return _object_cast_to_UnorderedTypeQuadPredicate(o)
8797  get_from = staticmethod(get_from)
8798 
8799 UnorderedTypeQuadPredicate_swigregister = _IMP_core.UnorderedTypeQuadPredicate_swigregister
8800 UnorderedTypeQuadPredicate_swigregister(UnorderedTypeQuadPredicate)
8801 
8802 class OrderedTypeQuadPredicate(IMP.kernel.QuadPredicate):
8803  """Proxy of C++ IMP::core::OrderedTypeQuadPredicate class"""
8804  __swig_setmethods__ = {}
8805  for _s in [IMP.kernel.QuadPredicate]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
8806  __setattr__ = lambda self, name, value: _swig_setattr(self, OrderedTypeQuadPredicate, name, value)
8807  __swig_getmethods__ = {}
8808  for _s in [IMP.kernel.QuadPredicate]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
8809  __getattr__ = lambda self, name: _swig_getattr(self, OrderedTypeQuadPredicate, name)
8810  def __init__(self, name="OrderedTypeQuadPredicate%1%"):
8811  """
8812  __init__(IMP::core::OrderedTypeQuadPredicate self, std::string name="OrderedTypeQuadPredicate%1%") -> OrderedTypeQuadPredicate
8813  __init__(IMP::core::OrderedTypeQuadPredicate self) -> OrderedTypeQuadPredicate
8814  """
8815  this = _IMP_core.new_OrderedTypeQuadPredicate(name)
8816  try: self.this.append(this)
8817  except: self.this = this
8818  def do_get_inputs(self, *args):
8819  """do_get_inputs(OrderedTypeQuadPredicate self, Model m, IMP::kernel::ParticleIndexes const & pis) -> IMP::kernel::ModelObjectsTemp"""
8820  return _IMP_core.OrderedTypeQuadPredicate_do_get_inputs(self, *args)
8821 
8822  def get_value(self, *args):
8823  """
8824  get_value(OrderedTypeQuadPredicate self, IMP::core::ParticleTypes const & types) -> int
8825  get_value(OrderedTypeQuadPredicate self, IMP::kernel::ParticleQuad const & a) -> int
8826  get_value(OrderedTypeQuadPredicate self, IMP::kernel::ParticleQuadsTemp const & o) -> IMP::Ints
8827  """
8828  return _IMP_core.OrderedTypeQuadPredicate_get_value(self, *args)
8829 
8830  def get_value_index(self, *args):
8831  """
8832  get_value_index(OrderedTypeQuadPredicate self, Model m, IMP::kernel::ParticleIndexQuad const & pi) -> int
8833  get_value_index(OrderedTypeQuadPredicate self, Model m, IMP::kernel::ParticleIndexQuads const & o) -> IMP::Ints
8834  """
8835  return _IMP_core.OrderedTypeQuadPredicate_get_value_index(self, *args)
8836 
8837  def get_version_info(self):
8838  """get_version_info(OrderedTypeQuadPredicate self) -> VersionInfo"""
8839  return _IMP_core.OrderedTypeQuadPredicate_get_version_info(self)
8840 
8841  def __str__(self):
8842  """__str__(OrderedTypeQuadPredicate self) -> std::string"""
8843  return _IMP_core.OrderedTypeQuadPredicate___str__(self)
8844 
8845  def __repr__(self):
8846  """__repr__(OrderedTypeQuadPredicate self) -> std::string"""
8847  return _IMP_core.OrderedTypeQuadPredicate___repr__(self)
8848 
8849  def get_from(o):
8850  return _object_cast_to_OrderedTypeQuadPredicate(o)
8851  get_from = staticmethod(get_from)
8852 
8853 OrderedTypeQuadPredicate_swigregister = _IMP_core.OrderedTypeQuadPredicate_swigregister
8854 OrderedTypeQuadPredicate_swigregister(OrderedTypeQuadPredicate)
8855 
8856 class AllSameQuadPredicate(IMP.kernel.QuadPredicate):
8857  """Proxy of C++ IMP::core::AllSameQuadPredicate class"""
8858  __swig_setmethods__ = {}
8859  for _s in [IMP.kernel.QuadPredicate]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
8860  __setattr__ = lambda self, name, value: _swig_setattr(self, AllSameQuadPredicate, name, value)
8861  __swig_getmethods__ = {}
8862  for _s in [IMP.kernel.QuadPredicate]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
8863  __getattr__ = lambda self, name: _swig_getattr(self, AllSameQuadPredicate, name)
8864  def __init__(self, name="AllSameQuadPredicate%1%"):
8865  """
8866  __init__(IMP::core::AllSameQuadPredicate self, std::string name="AllSameQuadPredicate%1%") -> AllSameQuadPredicate
8867  __init__(IMP::core::AllSameQuadPredicate self) -> AllSameQuadPredicate
8868  """
8869  this = _IMP_core.new_AllSameQuadPredicate(name)
8870  try: self.this.append(this)
8871  except: self.this = this
8872  def do_get_inputs(self, *args):
8873  """do_get_inputs(AllSameQuadPredicate self, Model arg2, IMP::kernel::ParticleIndexes const & arg3) -> IMP::kernel::ModelObjectsTemp"""
8874  return _IMP_core.AllSameQuadPredicate_do_get_inputs(self, *args)
8875 
8876  def get_value(self, *args):
8877  """
8878  get_value(AllSameQuadPredicate self, IMP::kernel::ParticleQuad const & a) -> int
8879  get_value(AllSameQuadPredicate self, IMP::kernel::ParticleQuadsTemp const & o) -> IMP::Ints
8880  """
8881  return _IMP_core.AllSameQuadPredicate_get_value(self, *args)
8882 
8883  def get_value_index(self, *args):
8884  """
8885  get_value_index(AllSameQuadPredicate self, Model m, IMP::kernel::ParticleIndexQuad const & pi) -> int
8886  get_value_index(AllSameQuadPredicate self, Model m, IMP::kernel::ParticleIndexQuads const & o) -> IMP::Ints
8887  """
8888  return _IMP_core.AllSameQuadPredicate_get_value_index(self, *args)
8889 
8890  def get_version_info(self):
8891  """get_version_info(AllSameQuadPredicate self) -> VersionInfo"""
8892  return _IMP_core.AllSameQuadPredicate_get_version_info(self)
8893 
8894  def __str__(self):
8895  """__str__(AllSameQuadPredicate self) -> std::string"""
8896  return _IMP_core.AllSameQuadPredicate___str__(self)
8897 
8898  def __repr__(self):
8899  """__repr__(AllSameQuadPredicate self) -> std::string"""
8900  return _IMP_core.AllSameQuadPredicate___repr__(self)
8901 
8902  def get_from(o):
8903  return _object_cast_to_AllSameQuadPredicate(o)
8904  get_from = staticmethod(get_from)
8905 
8906 AllSameQuadPredicate_swigregister = _IMP_core.AllSameQuadPredicate_swigregister
8907 AllSameQuadPredicate_swigregister(AllSameQuadPredicate)
8908 
8909 class CoinFlipQuadPredicate(IMP.kernel.QuadPredicate):
8910  """Proxy of C++ IMP::core::CoinFlipQuadPredicate class"""
8911  __swig_setmethods__ = {}
8912  for _s in [IMP.kernel.QuadPredicate]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
8913  __setattr__ = lambda self, name, value: _swig_setattr(self, CoinFlipQuadPredicate, name, value)
8914  __swig_getmethods__ = {}
8915  for _s in [IMP.kernel.QuadPredicate]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
8916  __getattr__ = lambda self, name: _swig_getattr(self, CoinFlipQuadPredicate, name)
8917  def __init__(self, *args):
8918  """
8919  __init__(IMP::core::CoinFlipQuadPredicate self, double p, std::string name="CoinFlipQuadPredicate%1%") -> CoinFlipQuadPredicate
8920  __init__(IMP::core::CoinFlipQuadPredicate self, double p) -> CoinFlipQuadPredicate
8921  """
8922  this = _IMP_core.new_CoinFlipQuadPredicate(*args)
8923  try: self.this.append(this)
8924  except: self.this = this
8925  def do_get_inputs(self, *args):
8926  """do_get_inputs(CoinFlipQuadPredicate self, Model arg2, IMP::kernel::ParticleIndexes const & arg3) -> IMP::kernel::ModelObjectsTemp"""
8927  return _IMP_core.CoinFlipQuadPredicate_do_get_inputs(self, *args)
8928 
8929  def get_value(self, *args):
8930  """
8931  get_value(CoinFlipQuadPredicate self, IMP::kernel::ParticleQuad const & a) -> int
8932  get_value(CoinFlipQuadPredicate self, IMP::kernel::ParticleQuadsTemp const & o) -> IMP::Ints
8933  """
8934  return _IMP_core.CoinFlipQuadPredicate_get_value(self, *args)
8935 
8936  def get_value_index(self, *args):
8937  """
8938  get_value_index(CoinFlipQuadPredicate self, Model arg2, IMP::kernel::ParticleIndexQuad const & arg3) -> int
8939  get_value_index(CoinFlipQuadPredicate self, Model m, IMP::kernel::ParticleIndexQuads const & o) -> IMP::Ints
8940  """
8941  return _IMP_core.CoinFlipQuadPredicate_get_value_index(self, *args)
8942 
8943  def get_version_info(self):
8944  """get_version_info(CoinFlipQuadPredicate self) -> VersionInfo"""
8945  return _IMP_core.CoinFlipQuadPredicate_get_version_info(self)
8946 
8947  def __str__(self):
8948  """__str__(CoinFlipQuadPredicate self) -> std::string"""
8949  return _IMP_core.CoinFlipQuadPredicate___str__(self)
8950 
8951  def __repr__(self):
8952  """__repr__(CoinFlipQuadPredicate self) -> std::string"""
8953  return _IMP_core.CoinFlipQuadPredicate___repr__(self)
8954 
8955  def get_from(o):
8956  return _object_cast_to_CoinFlipQuadPredicate(o)
8957  get_from = staticmethod(get_from)
8958 
8959 CoinFlipQuadPredicate_swigregister = _IMP_core.CoinFlipQuadPredicate_swigregister
8960 CoinFlipQuadPredicate_swigregister(CoinFlipQuadPredicate)
8961 
8962 class InBoundingBox3DSingletonPredicate(IMP.kernel.SingletonPredicate):
8963  """Proxy of C++ IMP::core::InBoundingBox3DSingletonPredicate class"""
8964  __swig_setmethods__ = {}
8965  for _s in [IMP.kernel.SingletonPredicate]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
8966  __setattr__ = lambda self, name, value: _swig_setattr(self, InBoundingBox3DSingletonPredicate, name, value)
8967  __swig_getmethods__ = {}
8968  for _s in [IMP.kernel.SingletonPredicate]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
8969  __getattr__ = lambda self, name: _swig_getattr(self, InBoundingBox3DSingletonPredicate, name)
8970  def __init__(self, *args):
8971  """
8972  __init__(IMP::core::InBoundingBox3DSingletonPredicate self, BoundingBox3D bb, std::string name="InBoundingBox3DSingletonPredicate%1%") -> InBoundingBox3DSingletonPredicate
8973  __init__(IMP::core::InBoundingBox3DSingletonPredicate self, BoundingBox3D bb) -> InBoundingBox3DSingletonPredicate
8974  """
8975  this = _IMP_core.new_InBoundingBox3DSingletonPredicate(*args)
8976  try: self.this.append(this)
8977  except: self.this = this
8978  def do_get_inputs(self, *args):
8979  """do_get_inputs(InBoundingBox3DSingletonPredicate self, Model m, IMP::kernel::ParticleIndexes const & pi) -> IMP::kernel::ModelObjectsTemp"""
8980  return _IMP_core.InBoundingBox3DSingletonPredicate_do_get_inputs(self, *args)
8981 
8982  def get_value(self, *args):
8983  """
8984  get_value(InBoundingBox3DSingletonPredicate self, Particle a) -> int
8985  get_value(InBoundingBox3DSingletonPredicate self, IMP::kernel::ParticlesTemp const & o) -> IMP::Ints
8986  """
8987  return _IMP_core.InBoundingBox3DSingletonPredicate_get_value(self, *args)
8988 
8989  def get_value_index(self, *args):
8990  """
8991  get_value_index(InBoundingBox3DSingletonPredicate self, Model m, IMP::kernel::ParticleIndex pi) -> int
8992  get_value_index(InBoundingBox3DSingletonPredicate self, Model m, IMP::kernel::ParticleIndexes const & o) -> IMP::Ints
8993  """
8994  return _IMP_core.InBoundingBox3DSingletonPredicate_get_value_index(self, *args)
8995 
8996  def get_version_info(self):
8997  """get_version_info(InBoundingBox3DSingletonPredicate self) -> VersionInfo"""
8998  return _IMP_core.InBoundingBox3DSingletonPredicate_get_version_info(self)
8999 
9000  def __str__(self):
9001  """__str__(InBoundingBox3DSingletonPredicate self) -> std::string"""
9002  return _IMP_core.InBoundingBox3DSingletonPredicate___str__(self)
9003 
9004  def __repr__(self):
9005  """__repr__(InBoundingBox3DSingletonPredicate self) -> std::string"""
9006  return _IMP_core.InBoundingBox3DSingletonPredicate___repr__(self)
9007 
9008  def get_from(o):
9009  return _object_cast_to_InBoundingBox3DSingletonPredicate(o)
9010  get_from = staticmethod(get_from)
9011 
9012 InBoundingBox3DSingletonPredicate_swigregister = _IMP_core.InBoundingBox3DSingletonPredicate_swigregister
9013 InBoundingBox3DSingletonPredicate_swigregister(InBoundingBox3DSingletonPredicate)
9014 
9015 class AttributeSingletonPredicate(IMP.kernel.SingletonPredicate):
9016  """Proxy of C++ IMP::core::AttributeSingletonPredicate class"""
9017  __swig_setmethods__ = {}
9018  for _s in [IMP.kernel.SingletonPredicate]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
9019  __setattr__ = lambda self, name, value: _swig_setattr(self, AttributeSingletonPredicate, name, value)
9020  __swig_getmethods__ = {}
9021  for _s in [IMP.kernel.SingletonPredicate]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
9022  __getattr__ = lambda self, name: _swig_getattr(self, AttributeSingletonPredicate, name)
9023  def __init__(self, *args):
9024  """
9025  __init__(IMP::core::AttributeSingletonPredicate self, IntKey bb, std::string name="AttributeSingletonPredicate%1%") -> AttributeSingletonPredicate
9026  __init__(IMP::core::AttributeSingletonPredicate self, IntKey bb) -> AttributeSingletonPredicate
9027  """
9028  this = _IMP_core.new_AttributeSingletonPredicate(*args)
9029  try: self.this.append(this)
9030  except: self.this = this
9031  def do_get_inputs(self, *args):
9032  """do_get_inputs(AttributeSingletonPredicate self, Model m, IMP::kernel::ParticleIndexes const & pi) -> IMP::kernel::ModelObjectsTemp"""
9033  return _IMP_core.AttributeSingletonPredicate_do_get_inputs(self, *args)
9034 
9035  def get_value(self, *args):
9036  """
9037  get_value(AttributeSingletonPredicate self, Particle a) -> int
9038  get_value(AttributeSingletonPredicate self, IMP::kernel::ParticlesTemp const & o) -> IMP::Ints
9039  """
9040  return _IMP_core.AttributeSingletonPredicate_get_value(self, *args)
9041 
9042  def get_value_index(self, *args):
9043  """
9044  get_value_index(AttributeSingletonPredicate self, Model m, IMP::kernel::ParticleIndex pi) -> int
9045  get_value_index(AttributeSingletonPredicate self, Model m, IMP::kernel::ParticleIndexes const & o) -> IMP::Ints
9046  """
9047  return _IMP_core.AttributeSingletonPredicate_get_value_index(self, *args)
9048 
9049  def get_version_info(self):
9050  """get_version_info(AttributeSingletonPredicate self) -> VersionInfo"""
9051  return _IMP_core.AttributeSingletonPredicate_get_version_info(self)
9052 
9053  def __str__(self):
9054  """__str__(AttributeSingletonPredicate self) -> std::string"""
9055  return _IMP_core.AttributeSingletonPredicate___str__(self)
9056 
9057  def __repr__(self):
9058  """__repr__(AttributeSingletonPredicate self) -> std::string"""
9059  return _IMP_core.AttributeSingletonPredicate___repr__(self)
9060 
9061  def get_from(o):
9062  return _object_cast_to_AttributeSingletonPredicate(o)
9063  get_from = staticmethod(get_from)
9064 
9065 AttributeSingletonPredicate_swigregister = _IMP_core.AttributeSingletonPredicate_swigregister
9066 AttributeSingletonPredicate_swigregister(AttributeSingletonPredicate)
9067 
9068 class IsCollisionPairPredicate(IMP.kernel.PairPredicate):
9069  """Proxy of C++ IMP::core::IsCollisionPairPredicate class"""
9070  __swig_setmethods__ = {}
9071  for _s in [IMP.kernel.PairPredicate]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
9072  __setattr__ = lambda self, name, value: _swig_setattr(self, IsCollisionPairPredicate, name, value)
9073  __swig_getmethods__ = {}
9074  for _s in [IMP.kernel.PairPredicate]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
9075  __getattr__ = lambda self, name: _swig_getattr(self, IsCollisionPairPredicate, name)
9076  def __init__(self, name="CollisionPairPredicate%1%"):
9077  """
9078  __init__(IMP::core::IsCollisionPairPredicate self, std::string name="CollisionPairPredicate%1%") -> IsCollisionPairPredicate
9079  __init__(IMP::core::IsCollisionPairPredicate self) -> IsCollisionPairPredicate
9080  """
9081  this = _IMP_core.new_IsCollisionPairPredicate(name)
9082  try: self.this.append(this)
9083  except: self.this = this
9084  def do_get_inputs(self, *args):
9085  """do_get_inputs(IsCollisionPairPredicate self, Model m, IMP::kernel::ParticleIndexes const & pi) -> IMP::kernel::ModelObjectsTemp"""
9086  return _IMP_core.IsCollisionPairPredicate_do_get_inputs(self, *args)
9087 
9088  def get_value(self, *args):
9089  """
9090  get_value(IsCollisionPairPredicate self, IMP::kernel::ParticlePair const & a) -> int
9091  get_value(IsCollisionPairPredicate self, IMP::kernel::ParticlePairsTemp const & o) -> IMP::Ints
9092  """
9093  return _IMP_core.IsCollisionPairPredicate_get_value(self, *args)
9094 
9095  def get_value_index(self, *args):
9096  """
9097  get_value_index(IsCollisionPairPredicate self, Model m, IMP::kernel::ParticleIndexPair const & pi) -> int
9098  get_value_index(IsCollisionPairPredicate self, Model m, IMP::kernel::ParticleIndexPairs const & o) -> IMP::Ints
9099  """
9100  return _IMP_core.IsCollisionPairPredicate_get_value_index(self, *args)
9101 
9102  def get_version_info(self):
9103  """get_version_info(IsCollisionPairPredicate self) -> VersionInfo"""
9104  return _IMP_core.IsCollisionPairPredicate_get_version_info(self)
9105 
9106  def __str__(self):
9107  """__str__(IsCollisionPairPredicate self) -> std::string"""
9108  return _IMP_core.IsCollisionPairPredicate___str__(self)
9109 
9110  def __repr__(self):
9111  """__repr__(IsCollisionPairPredicate self) -> std::string"""
9112  return _IMP_core.IsCollisionPairPredicate___repr__(self)
9113 
9114  def get_from(o):
9115  return _object_cast_to_IsCollisionPairPredicate(o)
9116  get_from = staticmethod(get_from)
9117 
9118 IsCollisionPairPredicate_swigregister = _IMP_core.IsCollisionPairPredicate_swigregister
9119 IsCollisionPairPredicate_swigregister(IsCollisionPairPredicate)
9120 
9121 class AngleRestraint(TripletRestraint):
9122  """Proxy of C++ IMP::core::AngleRestraint class"""
9123  __swig_setmethods__ = {}
9124  for _s in [TripletRestraint]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
9125  __setattr__ = lambda self, name, value: _swig_setattr(self, AngleRestraint, name, value)
9126  __swig_getmethods__ = {}
9127  for _s in [TripletRestraint]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
9128  __getattr__ = lambda self, name: _swig_getattr(self, AngleRestraint, name)
9129  def __init__(self, *args):
9130  """
9131  __init__(IMP::core::AngleRestraint self, UnaryFunction score_func, Particle p1, Particle p2, Particle p3) -> AngleRestraint
9132  __init__(IMP::core::AngleRestraint self, UnaryFunction score_func, XYZ p0, XYZ p1, XYZ p2) -> AngleRestraint
9133  """
9134  this = _IMP_core.new_AngleRestraint(*args)
9135  try: self.this.append(this)
9136  except: self.this = this
9137  def __str__(self):
9138  """__str__(AngleRestraint self) -> std::string"""
9139  return _IMP_core.AngleRestraint___str__(self)
9140 
9141  def __repr__(self):
9142  """__repr__(AngleRestraint self) -> std::string"""
9143  return _IMP_core.AngleRestraint___repr__(self)
9144 
9145  def get_from(o):
9146  return _object_cast_to_AngleRestraint(o)
9147  get_from = staticmethod(get_from)
9148 
9149 AngleRestraint_swigregister = _IMP_core.AngleRestraint_swigregister
9150 AngleRestraint_swigregister(AngleRestraint)
9151 
9152 class RigidBodyMover(MonteCarloMover):
9153  """Proxy of C++ IMP::core::RigidBodyMover class"""
9154  __swig_setmethods__ = {}
9155  for _s in [MonteCarloMover]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
9156  __setattr__ = lambda self, name, value: _swig_setattr(self, RigidBodyMover, name, value)
9157  __swig_getmethods__ = {}
9158  for _s in [MonteCarloMover]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
9159  __getattr__ = lambda self, name: _swig_getattr(self, RigidBodyMover, name)
9160  def __init__(self, *args):
9161  """
9162  __init__(IMP::core::RigidBodyMover self, Model m, IMP::kernel::ParticleIndex pi, IMP::Float max_translation, IMP::Float max_rotation) -> RigidBodyMover
9163  __init__(IMP::core::RigidBodyMover self, RigidBody d, IMP::Float max_translation, IMP::Float max_rotation) -> RigidBodyMover
9164  """
9165  this = _IMP_core.new_RigidBodyMover(*args)
9166  try: self.this.append(this)
9167  except: self.this = this
9168  def set_maximum_translation(self, *args):
9169  """set_maximum_translation(RigidBodyMover self, IMP::Float mt)"""
9170  return _IMP_core.RigidBodyMover_set_maximum_translation(self, *args)
9171 
9172  def set_maximum_rotation(self, *args):
9173  """set_maximum_rotation(RigidBodyMover self, IMP::Float mr)"""
9174  return _IMP_core.RigidBodyMover_set_maximum_rotation(self, *args)
9175 
9176  def get_maximum_translation(self):
9177  """get_maximum_translation(RigidBodyMover self) -> IMP::Float"""
9178  return _IMP_core.RigidBodyMover_get_maximum_translation(self)
9179 
9180  def get_maximum_rotation(self):
9181  """get_maximum_rotation(RigidBodyMover self) -> IMP::Float"""
9182  return _IMP_core.RigidBodyMover_get_maximum_rotation(self)
9183 
9184  def get_version_info(self):
9185  """get_version_info(RigidBodyMover self) -> VersionInfo"""
9186  return _IMP_core.RigidBodyMover_get_version_info(self)
9187 
9188  def __str__(self):
9189  """__str__(RigidBodyMover self) -> std::string"""
9190  return _IMP_core.RigidBodyMover___str__(self)
9191 
9192  def __repr__(self):
9193  """__repr__(RigidBodyMover self) -> std::string"""
9194  return _IMP_core.RigidBodyMover___repr__(self)
9195 
9196  def get_from(o):
9197  return _object_cast_to_RigidBodyMover(o)
9198  get_from = staticmethod(get_from)
9199 
9200 RigidBodyMover_swigregister = _IMP_core.RigidBodyMover_swigregister
9201 RigidBodyMover_swigregister(RigidBodyMover)
9202 
9203 class RigidBodyTunneler(MonteCarloMover):
9204  """Proxy of C++ IMP::core::RigidBodyTunneler class"""
9205  __swig_setmethods__ = {}
9206  for _s in [MonteCarloMover]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
9207  __setattr__ = lambda self, name, value: _swig_setattr(self, RigidBodyTunneler, name, value)
9208  __swig_getmethods__ = {}
9209  for _s in [MonteCarloMover]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
9210  __getattr__ = lambda self, name: _swig_getattr(self, RigidBodyTunneler, name)
9211  def __init__(self, *args):
9212  """
9213  __init__(IMP::core::RigidBodyTunneler self, Model m, IMP::kernel::ParticleIndexes pis, IMP::kernel::ParticleIndex ref, double k,
9214  double move_probability=1.) -> RigidBodyTunneler
9215  __init__(IMP::core::RigidBodyTunneler self, Model m, IMP::kernel::ParticleIndexes pis, IMP::kernel::ParticleIndex ref, double k) -> RigidBodyTunneler
9216  """
9217  this = _IMP_core.new_RigidBodyTunneler(*args)
9218  try: self.this.append(this)
9219  except: self.this = this
9220  def add_entry_point(self, *args):
9221  """add_entry_point(RigidBodyTunneler self, IMP::Floats fl)"""
9222  return _IMP_core.RigidBodyTunneler_add_entry_point(self, *args)
9223 
9224  def reset_stats(self):
9225  """reset_stats(RigidBodyTunneler self)"""
9226  return _IMP_core.RigidBodyTunneler_reset_stats(self)
9227 
9228  def get_number_of_rejected_moves(self):
9229  """get_number_of_rejected_moves(RigidBodyTunneler self) -> unsigned int"""
9230  return _IMP_core.RigidBodyTunneler_get_number_of_rejected_moves(self)
9231 
9232  def get_number_of_proposed_moves(self):
9233  """get_number_of_proposed_moves(RigidBodyTunneler self) -> unsigned int"""
9234  return _IMP_core.RigidBodyTunneler_get_number_of_proposed_moves(self)
9235 
9236  def get_number_of_impossible_moves(self):
9237  """get_number_of_impossible_moves(RigidBodyTunneler self) -> unsigned int"""
9238  return _IMP_core.RigidBodyTunneler_get_number_of_impossible_moves(self)
9239 
9240  def get_number_of_calls(self):
9241  """get_number_of_calls(RigidBodyTunneler self) -> unsigned int"""
9242  return _IMP_core.RigidBodyTunneler_get_number_of_calls(self)
9243 
9244  def get_reduced_coordinates(*args):
9245  """
9246  get_reduced_coordinates(Model m, IMP::kernel::ParticleIndex target, IMP::kernel::ParticleIndex ref) -> IMP::Floats
9247  get_reduced_coordinates(Model m, IMP::kernel::ParticleIndex pi) -> IMP::Floats
9248  """
9249  return _IMP_core.RigidBodyTunneler_get_reduced_coordinates(*args)
9250 
9251  if _newclass:get_reduced_coordinates = staticmethod(get_reduced_coordinates)
9252  __swig_getmethods__["get_reduced_coordinates"] = lambda x: get_reduced_coordinates
9253  def set_reduced_coordinates(*args):
9254  """set_reduced_coordinates(Model m, IMP::kernel::ParticleIndex target, IMP::kernel::ParticleIndex ref, IMP::Floats coords)"""
9255  return _IMP_core.RigidBodyTunneler_set_reduced_coordinates(*args)
9256 
9257  if _newclass:set_reduced_coordinates = staticmethod(set_reduced_coordinates)
9258  __swig_getmethods__["set_reduced_coordinates"] = lambda x: set_reduced_coordinates
9259  def get_version_info(self):
9260  """get_version_info(RigidBodyTunneler self) -> VersionInfo"""
9261  return _IMP_core.RigidBodyTunneler_get_version_info(self)
9262 
9263  def __str__(self):
9264  """__str__(RigidBodyTunneler self) -> std::string"""
9265  return _IMP_core.RigidBodyTunneler___str__(self)
9266 
9267  def __repr__(self):
9268  """__repr__(RigidBodyTunneler self) -> std::string"""
9269  return _IMP_core.RigidBodyTunneler___repr__(self)
9270 
9271  def get_from(o):
9272  return _object_cast_to_RigidBodyTunneler(o)
9273  get_from = staticmethod(get_from)
9274 
9275 RigidBodyTunneler_swigregister = _IMP_core.RigidBodyTunneler_swigregister
9276 RigidBodyTunneler_swigregister(RigidBodyTunneler)
9277 
9278 def RigidBodyTunneler_get_reduced_coordinates(*args):
9279  """
9280  get_reduced_coordinates(Model m, IMP::kernel::ParticleIndex target, IMP::kernel::ParticleIndex ref) -> IMP::Floats
9281  RigidBodyTunneler_get_reduced_coordinates(Model m, IMP::kernel::ParticleIndex pi) -> IMP::Floats
9282  """
9283  return _IMP_core.RigidBodyTunneler_get_reduced_coordinates(*args)
9284 
9285 def RigidBodyTunneler_set_reduced_coordinates(*args):
9286  """RigidBodyTunneler_set_reduced_coordinates(Model m, IMP::kernel::ParticleIndex target, IMP::kernel::ParticleIndex ref, IMP::Floats coords)"""
9287  return _IMP_core.RigidBodyTunneler_set_reduced_coordinates(*args)
9288 
9289 class RigidBodyUmbrella(IMP.kernel.Restraint):
9290  """Proxy of C++ IMP::core::RigidBodyUmbrella class"""
9291  __swig_setmethods__ = {}
9292  for _s in [IMP.kernel.Restraint]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
9293  __setattr__ = lambda self, name, value: _swig_setattr(self, RigidBodyUmbrella, name, value)
9294  __swig_getmethods__ = {}
9295  for _s in [IMP.kernel.Restraint]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
9296  __getattr__ = lambda self, name: _swig_getattr(self, RigidBodyUmbrella, name)
9297  def __init__(self, *args):
9298  """
9299  __init__(IMP::core::RigidBodyUmbrella self, Model m, IMP::kernel::ParticleIndex pi, IMP::kernel::ParticleIndex ref, IMP::Floats x0,
9300  double alpha, double k, std::string name="RigidBodyUmbrella %1%") -> RigidBodyUmbrella
9301  __init__(IMP::core::RigidBodyUmbrella self, Model m, IMP::kernel::ParticleIndex pi, IMP::kernel::ParticleIndex ref, IMP::Floats x0,
9302  double alpha, double k) -> RigidBodyUmbrella
9303  __init__(IMP::core::RigidBodyUmbrella self, Model m, IMP::kernel::ParticleIndex pi, IMP::kernel::ParticleIndex ref, double _lambda,
9304  IMP::Floats x1, IMP::Floats x2, double alpha, double k, std::string name="RigidBodyUmbrella %1%") -> RigidBodyUmbrella
9305  __init__(IMP::core::RigidBodyUmbrella self, Model m, IMP::kernel::ParticleIndex pi, IMP::kernel::ParticleIndex ref, double _lambda,
9306  IMP::Floats x1, IMP::Floats x2, double alpha, double k) -> RigidBodyUmbrella
9307  """
9308  this = _IMP_core.new_RigidBodyUmbrella(*args)
9309  try: self.this.append(this)
9310  except: self.this = this
9311  def set_x0(self, *args):
9312  """
9313  set_x0(RigidBodyUmbrella self, IMP::Floats x0)
9314  set_x0(RigidBodyUmbrella self, double _lambda, IMP::Floats x1, IMP::Floats x2)
9315  """
9316  return _IMP_core.RigidBodyUmbrella_set_x0(self, *args)
9317 
9318  def get_x0(self):
9319  """get_x0(RigidBodyUmbrella self) -> IMP::Floats"""
9320  return _IMP_core.RigidBodyUmbrella_get_x0(self)
9321 
9322  def get_x(self):
9323  """get_x(RigidBodyUmbrella self) -> IMP::Floats"""
9324  return _IMP_core.RigidBodyUmbrella_get_x(self)
9325 
9326  def set_alpha(self, *args):
9327  """set_alpha(RigidBodyUmbrella self, double alpha)"""
9328  return _IMP_core.RigidBodyUmbrella_set_alpha(self, *args)
9329 
9330  def set_k(self, *args):
9331  """set_k(RigidBodyUmbrella self, double k)"""
9332  return _IMP_core.RigidBodyUmbrella_set_k(self, *args)
9333 
9334  def get_version_info(self):
9335  """get_version_info(RigidBodyUmbrella self) -> VersionInfo"""
9336  return _IMP_core.RigidBodyUmbrella_get_version_info(self)
9337 
9338  def __str__(self):
9339  """__str__(RigidBodyUmbrella self) -> std::string"""
9340  return _IMP_core.RigidBodyUmbrella___str__(self)
9341 
9342  def __repr__(self):
9343  """__repr__(RigidBodyUmbrella self) -> std::string"""
9344  return _IMP_core.RigidBodyUmbrella___repr__(self)
9345 
9346  def get_from(o):
9347  return _object_cast_to_RigidBodyUmbrella(o)
9348  get_from = staticmethod(get_from)
9349 
9350 RigidBodyUmbrella_swigregister = _IMP_core.RigidBodyUmbrella_swigregister
9351 RigidBodyUmbrella_swigregister(RigidBodyUmbrella)
9352 
9353 class VolumeRestraint(IMP.kernel.Restraint):
9354  """Proxy of C++ IMP::core::VolumeRestraint class"""
9355  __swig_setmethods__ = {}
9356  for _s in [IMP.kernel.Restraint]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
9357  __setattr__ = lambda self, name, value: _swig_setattr(self, VolumeRestraint, name, value)
9358  __swig_getmethods__ = {}
9359  for _s in [IMP.kernel.Restraint]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
9360  __getattr__ = lambda self, name: _swig_getattr(self, VolumeRestraint, name)
9361  def __init__(self, *args):
9362  """__init__(IMP::core::VolumeRestraint self, UnaryFunction f, SingletonContainer sc, double volume) -> VolumeRestraint"""
9363  this = _IMP_core.new_VolumeRestraint(*args)
9364  try: self.this.append(this)
9365  except: self.this = this
9366  def do_get_inputs(self):
9367  """do_get_inputs(VolumeRestraint self) -> IMP::kernel::ModelObjectsTemp"""
9368  return _IMP_core.VolumeRestraint_do_get_inputs(self)
9369 
9370  def get_version_info(self):
9371  """get_version_info(VolumeRestraint self) -> VersionInfo"""
9372  return _IMP_core.VolumeRestraint_get_version_info(self)
9373 
9374  def __str__(self):
9375  """__str__(VolumeRestraint self) -> std::string"""
9376  return _IMP_core.VolumeRestraint___str__(self)
9377 
9378  def __repr__(self):
9379  """__repr__(VolumeRestraint self) -> std::string"""
9380  return _IMP_core.VolumeRestraint___repr__(self)
9381 
9382  def get_from(o):
9383  return _object_cast_to_VolumeRestraint(o)
9384  get_from = staticmethod(get_from)
9385 
9386 VolumeRestraint_swigregister = _IMP_core.VolumeRestraint_swigregister
9387 VolumeRestraint_swigregister(VolumeRestraint)
9388 
9389 
9390 def get_centroid(*args):
9391  """get_centroid(IMP::core::XYZs const & ps) -> Vector3D"""
9392  return _IMP_core.get_centroid(*args)
9393 
9394 def get_bounding_box(*args):
9395  """get_bounding_box(IMP::core::XYZRs const & ps) -> BoundingBox3D"""
9396  return _IMP_core.get_bounding_box(*args)
9397 class MoveStatisticsScoreState(IMP.kernel.ScoreState):
9398  """Proxy of C++ IMP::core::MoveStatisticsScoreState class"""
9399  __swig_setmethods__ = {}
9400  for _s in [IMP.kernel.ScoreState]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
9401  __setattr__ = lambda self, name, value: _swig_setattr(self, MoveStatisticsScoreState, name, value)
9402  __swig_getmethods__ = {}
9403  for _s in [IMP.kernel.ScoreState]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
9404  __getattr__ = lambda self, name: _swig_getattr(self, MoveStatisticsScoreState, name)
9405  def __init__(self, *args):
9406  """__init__(IMP::core::MoveStatisticsScoreState self, IMP::kernel::ParticlesTemp const & ps) -> MoveStatisticsScoreState"""
9407  this = _IMP_core.new_MoveStatisticsScoreState(*args)
9408  try: self.this.append(this)
9409  except: self.this = this
9410  def show_statistics(self, *args):
9411  """
9412  show_statistics(MoveStatisticsScoreState self, _ostream out=std::cout)
9413  show_statistics(MoveStatisticsScoreState self)
9414  """
9415  return _IMP_core.MoveStatisticsScoreState_show_statistics(self, *args)
9416 
9417  def reset(self):
9418  """reset(MoveStatisticsScoreState self)"""
9419  return _IMP_core.MoveStatisticsScoreState_reset(self)
9420 
9421  def do_before_evaluate(self):
9422  """do_before_evaluate(MoveStatisticsScoreState self)"""
9423  return _IMP_core.MoveStatisticsScoreState_do_before_evaluate(self)
9424 
9425  def do_after_evaluate(self, *args):
9426  """do_after_evaluate(MoveStatisticsScoreState self, DerivativeAccumulator da)"""
9427  return _IMP_core.MoveStatisticsScoreState_do_after_evaluate(self, *args)
9428 
9429  def do_get_inputs(self):
9430  """do_get_inputs(MoveStatisticsScoreState self) -> IMP::kernel::ModelObjectsTemp"""
9431  return _IMP_core.MoveStatisticsScoreState_do_get_inputs(self)
9432 
9433  def do_get_outputs(self):
9434  """do_get_outputs(MoveStatisticsScoreState self) -> IMP::kernel::ModelObjectsTemp"""
9435  return _IMP_core.MoveStatisticsScoreState_do_get_outputs(self)
9436 
9437  def get_version_info(self):
9438  """get_version_info(MoveStatisticsScoreState self) -> VersionInfo"""
9439  return _IMP_core.MoveStatisticsScoreState_get_version_info(self)
9440 
9441  def __str__(self):
9442  """__str__(MoveStatisticsScoreState self) -> std::string"""
9443  return _IMP_core.MoveStatisticsScoreState___str__(self)
9444 
9445  def __repr__(self):
9446  """__repr__(MoveStatisticsScoreState self) -> std::string"""
9447  return _IMP_core.MoveStatisticsScoreState___repr__(self)
9448 
9449  def get_from(o):
9450  return _object_cast_to_MoveStatisticsScoreState(o)
9451  get_from = staticmethod(get_from)
9452 
9453 MoveStatisticsScoreState_swigregister = _IMP_core.MoveStatisticsScoreState_swigregister
9454 MoveStatisticsScoreState_swigregister(MoveStatisticsScoreState)
9455 
9456 IMP_PARTICLE_TYPE_INDEX = _IMP_core.IMP_PARTICLE_TYPE_INDEX
9457 class Typed(IMP.kernel.Decorator):
9458  """Proxy of C++ IMP::core::Typed class"""
9459  __swig_setmethods__ = {}
9460  for _s in [IMP.kernel.Decorator]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
9461  __setattr__ = lambda self, name, value: _swig_setattr(self, Typed, name, value)
9462  __swig_getmethods__ = {}
9463  for _s in [IMP.kernel.Decorator]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
9464  __getattr__ = lambda self, name: _swig_getattr(self, Typed, name)
9465  def get_type_key():
9466  """get_type_key() -> IntKey"""
9467  return _IMP_core.Typed_get_type_key()
9468 
9469  if _newclass:get_type_key = staticmethod(get_type_key)
9470  __swig_getmethods__["get_type_key"] = lambda x: get_type_key
9471  def __init__(self, *args):
9472  """
9473  __init__(IMP::core::Typed self) -> Typed
9474  __init__(IMP::core::Typed self, Model m, ::IMP::kernel::ParticleIndex id) -> Typed
9475  __init__(IMP::core::Typed self, _ParticleAdaptor d) -> Typed
9476  """
9477  this = _IMP_core.new_Typed(*args)
9478  try: self.this.append(this)
9479  except: self.this = this
9480  def show(self, *args):
9481  """
9482  show(Typed self, _ostream out=std::cout)
9483  show(Typed self)
9484  """
9485  return _IMP_core.Typed_show(self, *args)
9486 
9487  def setup_particle(*args):
9488  """
9489  setup_particle(Model m, IMP::kernel::ParticleIndex pi, ParticleType t) -> Typed
9490  setup_particle(_ParticleAdaptor decorator, ParticleType t) -> Typed
9491  """
9492  return _IMP_core.Typed_setup_particle(*args)
9493 
9494  if _newclass:setup_particle = staticmethod(setup_particle)
9495  __swig_getmethods__["setup_particle"] = lambda x: setup_particle
9496  def get_is_setup(*args):
9497  """
9498  get_is_setup(_ParticleAdaptor p) -> bool
9499  get_is_setup(Model m, IMP::kernel::ParticleIndex pi) -> bool
9500  """
9501  return _IMP_core.Typed_get_is_setup(*args)
9502 
9503  if _newclass:get_is_setup = staticmethod(get_is_setup)
9504  __swig_getmethods__["get_is_setup"] = lambda x: get_is_setup
9505  def get_type(self):
9506  """get_type(Typed self) -> ParticleType"""
9507  return _IMP_core.Typed_get_type(self)
9508 
9509  def add_attribute(self, *args):
9510  """
9511  add_attribute(Typed self, FloatKey k, IMP::Float v, bool opt)
9512  add_attribute(Typed self, FloatKey a0, IMP::Float a1)
9513  add_attribute(Typed self, IntKey a0, IMP::Int a1)
9514  add_attribute(Typed self, StringKey a0, IMP::String a1)
9515  add_attribute(Typed self, ParticleIndexKey a0, Particle a1)
9516  add_attribute(Typed self, ObjectKey a0, Object a1)
9517  """
9518  return _IMP_core.Typed_add_attribute(self, *args)
9519 
9520  def get_value(self, *args):
9521  """
9522  get_value(Typed self, FloatKey a0) -> IMP::Float
9523  get_value(Typed self, IntKey a0) -> IMP::Int
9524  get_value(Typed self, StringKey a0) -> IMP::String
9525  get_value(Typed self, ParticleIndexKey a0) -> Particle
9526  get_value(Typed self, ObjectKey a0) -> Object
9527  """
9528  return _IMP_core.Typed_get_value(self, *args)
9529 
9530  def set_value(self, *args):
9531  """
9532  set_value(Typed self, FloatKey a0, IMP::Float a1)
9533  set_value(Typed self, IntKey a0, IMP::Int a1)
9534  set_value(Typed self, StringKey a0, IMP::String a1)
9535  set_value(Typed self, ParticleIndexKey a0, Particle a1)
9536  set_value(Typed self, ObjectKey a0, Object a1)
9537  """
9538  return _IMP_core.Typed_set_value(self, *args)
9539 
9540  def remove_attribute(self, *args):
9541  """
9542  remove_attribute(Typed self, FloatKey a0)
9543  remove_attribute(Typed self, IntKey a0)
9544  remove_attribute(Typed self, StringKey a0)
9545  remove_attribute(Typed self, ParticleIndexKey a0)
9546  remove_attribute(Typed self, ObjectKey a0)
9547  """
9548  return _IMP_core.Typed_remove_attribute(self, *args)
9549 
9550  def has_attribute(self, *args):
9551  """
9552  has_attribute(Typed self, FloatKey a0) -> bool
9553  has_attribute(Typed self, IntKey a0) -> bool
9554  has_attribute(Typed self, StringKey a0) -> bool
9555  has_attribute(Typed self, ParticleIndexKey a0) -> bool
9556  has_attribute(Typed self, ObjectKey a0) -> bool
9557  """
9558  return _IMP_core.Typed_has_attribute(self, *args)
9559 
9560  def get_derivative(self, *args):
9561  """get_derivative(Typed self, FloatKey a0) -> double"""
9562  return _IMP_core.Typed_get_derivative(self, *args)
9563 
9564  def get_name(self):
9565  """get_name(Typed self) -> std::string"""
9566  return _IMP_core.Typed_get_name(self)
9567 
9568  def clear_caches(self):
9569  """clear_caches(Typed self)"""
9570  return _IMP_core.Typed_clear_caches(self)
9571 
9572  def set_name(self, *args):
9573  """set_name(Typed self, std::string a0)"""
9574  return _IMP_core.Typed_set_name(self, *args)
9575 
9576  def set_check_level(self, *args):
9577  """set_check_level(Typed self, IMP::base::CheckLevel a0)"""
9578  return _IMP_core.Typed_set_check_level(self, *args)
9579 
9580  def add_to_derivative(self, *args):
9581  """add_to_derivative(Typed self, FloatKey a0, double a1, DerivativeAccumulator a2)"""
9582  return _IMP_core.Typed_add_to_derivative(self, *args)
9583 
9584  def set_is_optimized(self, *args):
9585  """set_is_optimized(Typed self, FloatKey a0, bool a1)"""
9586  return _IMP_core.Typed_set_is_optimized(self, *args)
9587 
9588  def get_is_optimized(self, *args):
9589  """get_is_optimized(Typed self, FloatKey a0) -> bool"""
9590  return _IMP_core.Typed_get_is_optimized(self, *args)
9591 
9592  def get_check_level(self):
9593  """get_check_level(Typed self) -> IMP::base::CheckLevel"""
9594  return _IMP_core.Typed_get_check_level(self)
9595 
9596  def __eq__(self, *args):
9597  """
9598  __eq__(Typed self, Typed o) -> bool
9599  __eq__(Typed self, Particle d) -> bool
9600  """
9601  return _IMP_core.Typed___eq__(self, *args)
9602 
9603  def __ne__(self, *args):
9604  """
9605  __ne__(Typed self, Typed o) -> bool
9606  __ne__(Typed self, Particle d) -> bool
9607  """
9608  return _IMP_core.Typed___ne__(self, *args)
9609 
9610  def __le__(self, *args):
9611  """
9612  __le__(Typed self, Typed o) -> bool
9613  __le__(Typed self, Particle d) -> bool
9614  """
9615  return _IMP_core.Typed___le__(self, *args)
9616 
9617  def __lt__(self, *args):
9618  """
9619  __lt__(Typed self, Typed o) -> bool
9620  __lt__(Typed self, Particle d) -> bool
9621  """
9622  return _IMP_core.Typed___lt__(self, *args)
9623 
9624  def __ge__(self, *args):
9625  """
9626  __ge__(Typed self, Typed o) -> bool
9627  __ge__(Typed self, Particle d) -> bool
9628  """
9629  return _IMP_core.Typed___ge__(self, *args)
9630 
9631  def __gt__(self, *args):
9632  """
9633  __gt__(Typed self, Typed o) -> bool
9634  __gt__(Typed self, Particle d) -> bool
9635  """
9636  return _IMP_core.Typed___gt__(self, *args)
9637 
9638  def __str__(self):
9639  """__str__(Typed self) -> std::string"""
9640  return _IMP_core.Typed___str__(self)
9641 
9642  def __repr__(self):
9643  """__repr__(Typed self) -> std::string"""
9644  return _IMP_core.Typed___repr__(self)
9645 
9646  __swig_destroy__ = _IMP_core.delete_Typed
9647  __del__ = lambda self : None;
9648 Typed_swigregister = _IMP_core.Typed_swigregister
9649 Typed_swigregister(Typed)
9650 
9651 def Typed_get_type_key():
9652  """Typed_get_type_key() -> IntKey"""
9653  return _IMP_core.Typed_get_type_key()
9654 
9655 def Typed_setup_particle(*args):
9656  """
9657  setup_particle(Model m, IMP::kernel::ParticleIndex pi, ParticleType t) -> Typed
9658  Typed_setup_particle(_ParticleAdaptor decorator, ParticleType t) -> Typed
9659  """
9660  return _IMP_core.Typed_setup_particle(*args)
9661 
9662 def Typed_get_is_setup(*args):
9663  """
9664  get_is_setup(_ParticleAdaptor p) -> bool
9665  Typed_get_is_setup(Model m, IMP::kernel::ParticleIndex pi) -> bool
9666  """
9667  return _IMP_core.Typed_get_is_setup(*args)
9668 
9669 
9670 def __lshift__(*args):
9671  """
9672  __lshift__(_ostream out, XYZ n) -> _ostream
9673  __lshift__(_ostream out, XYZR n) -> _ostream
9674  __lshift__(_ostream out, Centroid n) -> _ostream
9675  __lshift__(_ostream out, Cover n) -> _ostream
9676  __lshift__(_ostream out, Reference n) -> _ostream
9677  __lshift__(_ostream out, RigidMember n) -> _ostream
9678  __lshift__(_ostream out, RigidBody n) -> _ostream
9679  __lshift__(_ostream out, Gaussian n) -> _ostream
9680  __lshift__(_ostream out, Typed n) -> _ostream
9681  """
9682  return _IMP_core.__lshift__(*args)
9683 class WriteRestraintScoresOptimizerState(IMP.kernel.OptimizerState):
9684  """Proxy of C++ IMP::core::WriteRestraintScoresOptimizerState class"""
9685  __swig_setmethods__ = {}
9686  for _s in [IMP.kernel.OptimizerState]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
9687  __setattr__ = lambda self, name, value: _swig_setattr(self, WriteRestraintScoresOptimizerState, name, value)
9688  __swig_getmethods__ = {}
9689  for _s in [IMP.kernel.OptimizerState]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
9690  __getattr__ = lambda self, name: _swig_getattr(self, WriteRestraintScoresOptimizerState, name)
9691  def __init__(self, *args):
9692  """__init__(IMP::core::WriteRestraintScoresOptimizerState self, IMP::kernel::Restraints const & rs, TextOutput out) -> WriteRestraintScoresOptimizerState"""
9693  this = _IMP_core.new_WriteRestraintScoresOptimizerState(*args)
9694  try: self.this.append(this)
9695  except: self.this = this
9696  def get_version_info(self):
9697  """get_version_info(WriteRestraintScoresOptimizerState self) -> VersionInfo"""
9698  return _IMP_core.WriteRestraintScoresOptimizerState_get_version_info(self)
9699 
9700  def __str__(self):
9701  """__str__(WriteRestraintScoresOptimizerState self) -> std::string"""
9702  return _IMP_core.WriteRestraintScoresOptimizerState___str__(self)
9703 
9704  def __repr__(self):
9705  """__repr__(WriteRestraintScoresOptimizerState self) -> std::string"""
9706  return _IMP_core.WriteRestraintScoresOptimizerState___repr__(self)
9707 
9708  def get_from(o):
9709  return _object_cast_to_WriteRestraintScoresOptimizerState(o)
9710  get_from = staticmethod(get_from)
9711 
9712 WriteRestraintScoresOptimizerState_swigregister = _IMP_core.WriteRestraintScoresOptimizerState_swigregister
9713 WriteRestraintScoresOptimizerState_swigregister(WriteRestraintScoresOptimizerState)
9714 
9715 
9716 def assign_blame(*args):
9717  """assign_blame(IMP::kernel::RestraintsTemp const & rs, IMP::kernel::ParticlesTemp const & ps, FloatKey attribute)"""
9718  return _IMP_core.assign_blame(*args)
9719 
9720 def create_blame_geometries(*args):
9721  """
9722  create_blame_geometries(IMP::kernel::RestraintsTemp const & rs, IMP::kernel::ParticlesTemp const & ps, double max=NO_MAX,
9723  std::string name=std::string()) -> IMP::display::Geometries
9724  create_blame_geometries(IMP::kernel::RestraintsTemp const & rs, IMP::kernel::ParticlesTemp const & ps, double max=NO_MAX) -> IMP::display::Geometries
9725  create_blame_geometries(IMP::kernel::RestraintsTemp const & rs, IMP::kernel::ParticlesTemp const & ps) -> IMP::display::Geometries
9726  """
9727  return _IMP_core.create_blame_geometries(*args)
9728 
9730  """
9731  get_transformation_aligning_first_to_second(IMP::kernel::ParticlesTemp const & a, IMP::kernel::ParticlesTemp const & b) -> Transformation3D
9732  get_transformation_aligning_first_to_second(IMP::kernel::ParticlesTemp const & a, IMP::base::Vector< IMP::algebra::VectorD< 3 > > const & b) -> Transformation3D
9733  get_transformation_aligning_first_to_second(IMP::base::Vector< IMP::algebra::VectorD< 3 > > const & a, IMP::kernel::ParticlesTemp const & b) -> Transformation3D
9734  """
9735  return _IMP_core.get_transformation_aligning_first_to_second(*args)
9736 
9737 def create_restraint(*args):
9738  """create_restraint(PairScore ps, IMP::kernel::ParticlePair pp) -> Restraint"""
9739  return _IMP_core.create_restraint(*args)
9741  """Proxy of C++ IMP::core::TruncatedHarmonic<(IMP::core::LOWER)> class"""
9742  __swig_setmethods__ = {}
9743  for _s in [IMP.kernel.UnaryFunction]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
9744  __setattr__ = lambda self, name, value: _swig_setattr(self, TruncatedHarmonicLowerBound, name, value)
9745  __swig_getmethods__ = {}
9746  for _s in [IMP.kernel.UnaryFunction]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
9747  __getattr__ = lambda self, name: _swig_getattr(self, TruncatedHarmonicLowerBound, name)
9748  def __init__(self, *args):
9749  """
9750  __init__(IMP::core::TruncatedHarmonic<(IMP::core::LOWER)> self, IMP::Float center, IMP::Float k, IMP::Float threshold, IMP::Float limit) -> TruncatedHarmonicLowerBound
9751  __init__(IMP::core::TruncatedHarmonic<(IMP::core::LOWER)> self, IMP::Float center, IMP::Float k, IMP::Float threshold) -> TruncatedHarmonicLowerBound
9752  """
9753  this = _IMP_core.new_TruncatedHarmonicLowerBound(*args)
9754  try: self.this.append(this)
9755  except: self.this = this
9756  def get_version_info(self):
9757  """get_version_info(TruncatedHarmonicLowerBound self) -> VersionInfo"""
9758  return _IMP_core.TruncatedHarmonicLowerBound_get_version_info(self)
9759 
9760  def __str__(self):
9761  """__str__(TruncatedHarmonicLowerBound self) -> std::string"""
9762  return _IMP_core.TruncatedHarmonicLowerBound___str__(self)
9763 
9764  def __repr__(self):
9765  """__repr__(TruncatedHarmonicLowerBound self) -> std::string"""
9766  return _IMP_core.TruncatedHarmonicLowerBound___repr__(self)
9767 
9768  def get_from(o):
9769  return _object_cast_to_TruncatedHarmonic(o)
9770  get_from = staticmethod(get_from)
9771 
9772 TruncatedHarmonicLowerBound_swigregister = _IMP_core.TruncatedHarmonicLowerBound_swigregister
9773 TruncatedHarmonicLowerBound_swigregister(TruncatedHarmonicLowerBound)
9774 
9776  """Proxy of C++ IMP::core::TruncatedHarmonic<(IMP::core::UPPER)> class"""
9777  __swig_setmethods__ = {}
9778  for _s in [IMP.kernel.UnaryFunction]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
9779  __setattr__ = lambda self, name, value: _swig_setattr(self, TruncatedHarmonicUpperBound, name, value)
9780  __swig_getmethods__ = {}
9781  for _s in [IMP.kernel.UnaryFunction]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
9782  __getattr__ = lambda self, name: _swig_getattr(self, TruncatedHarmonicUpperBound, name)
9783  def __init__(self, *args):
9784  """
9785  __init__(IMP::core::TruncatedHarmonic<(IMP::core::UPPER)> self, IMP::Float center, IMP::Float k, IMP::Float threshold, IMP::Float limit) -> TruncatedHarmonicUpperBound
9786  __init__(IMP::core::TruncatedHarmonic<(IMP::core::UPPER)> self, IMP::Float center, IMP::Float k, IMP::Float threshold) -> TruncatedHarmonicUpperBound
9787  """
9788  this = _IMP_core.new_TruncatedHarmonicUpperBound(*args)
9789  try: self.this.append(this)
9790  except: self.this = this
9791  def get_version_info(self):
9792  """get_version_info(TruncatedHarmonicUpperBound self) -> VersionInfo"""
9793  return _IMP_core.TruncatedHarmonicUpperBound_get_version_info(self)
9794 
9795  def __str__(self):
9796  """__str__(TruncatedHarmonicUpperBound self) -> std::string"""
9797  return _IMP_core.TruncatedHarmonicUpperBound___str__(self)
9798 
9799  def __repr__(self):
9800  """__repr__(TruncatedHarmonicUpperBound self) -> std::string"""
9801  return _IMP_core.TruncatedHarmonicUpperBound___repr__(self)
9802 
9803  def get_from(o):
9804  return _object_cast_to_TruncatedHarmonic(o)
9805  get_from = staticmethod(get_from)
9806 
9807 TruncatedHarmonicUpperBound_swigregister = _IMP_core.TruncatedHarmonicUpperBound_swigregister
9808 TruncatedHarmonicUpperBound_swigregister(TruncatedHarmonicUpperBound)
9809 
9811  """Proxy of C++ IMP::core::TruncatedHarmonic<(IMP::core::BOTH)> class"""
9812  __swig_setmethods__ = {}
9813  for _s in [IMP.kernel.UnaryFunction]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
9814  __setattr__ = lambda self, name, value: _swig_setattr(self, TruncatedHarmonicBound, name, value)
9815  __swig_getmethods__ = {}
9816  for _s in [IMP.kernel.UnaryFunction]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
9817  __getattr__ = lambda self, name: _swig_getattr(self, TruncatedHarmonicBound, name)
9818  def __init__(self, *args):
9819  """
9820  __init__(IMP::core::TruncatedHarmonic<(IMP::core::BOTH)> self, IMP::Float center, IMP::Float k, IMP::Float threshold, IMP::Float limit) -> TruncatedHarmonicBound
9821  __init__(IMP::core::TruncatedHarmonic<(IMP::core::BOTH)> self, IMP::Float center, IMP::Float k, IMP::Float threshold) -> TruncatedHarmonicBound
9822  """
9823  this = _IMP_core.new_TruncatedHarmonicBound(*args)
9824  try: self.this.append(this)
9825  except: self.this = this
9826  def get_version_info(self):
9827  """get_version_info(TruncatedHarmonicBound self) -> VersionInfo"""
9828  return _IMP_core.TruncatedHarmonicBound_get_version_info(self)
9829 
9830  def __str__(self):
9831  """__str__(TruncatedHarmonicBound self) -> std::string"""
9832  return _IMP_core.TruncatedHarmonicBound___str__(self)
9833 
9834  def __repr__(self):
9835  """__repr__(TruncatedHarmonicBound self) -> std::string"""
9836  return _IMP_core.TruncatedHarmonicBound___repr__(self)
9837 
9838  def get_from(o):
9839  return _object_cast_to_TruncatedHarmonic(o)
9840  get_from = staticmethod(get_from)
9841 
9842 TruncatedHarmonicBound_swigregister = _IMP_core.TruncatedHarmonicBound_swigregister
9843 TruncatedHarmonicBound_swigregister(TruncatedHarmonicBound)
9844 
9845 class ParticleType(IMP.base._Value):
9846  """Proxy of C++ IMP::Key<(34897493,true)> class"""
9847  __swig_setmethods__ = {}
9848  for _s in [IMP.base._Value]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
9849  __setattr__ = lambda self, name, value: _swig_setattr(self, ParticleType, name, value)
9850  __swig_getmethods__ = {}
9851  for _s in [IMP.base._Value]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
9852  __getattr__ = lambda self, name: _swig_getattr(self, ParticleType, name)
9853  def __init__(self, *args):
9854  """
9855  __init__(IMP::Key<(34897493,true)> self) -> ParticleType
9856  __init__(IMP::Key<(34897493,true)> self, std::string c) -> ParticleType
9857  __init__(IMP::Key<(34897493,true)> self, unsigned int i) -> ParticleType
9858  """
9859  this = _IMP_core.new_ParticleType(*args)
9860  try: self.this.append(this)
9861  except: self.this = this
9862  def add_key(*args):
9863  """add_key(std::string sc) -> unsigned int"""
9864  return _IMP_core.ParticleType_add_key(*args)
9865 
9866  if _newclass:add_key = staticmethod(add_key)
9867  __swig_getmethods__["add_key"] = lambda x: add_key
9868  def get_key_exists(*args):
9869  """get_key_exists(std::string sc) -> bool"""
9870  return _IMP_core.ParticleType_get_key_exists(*args)
9871 
9872  if _newclass:get_key_exists = staticmethod(get_key_exists)
9873  __swig_getmethods__["get_key_exists"] = lambda x: get_key_exists
9874  def get_string(self):
9875  """get_string(ParticleType self) -> std::string const"""
9876  return _IMP_core.ParticleType_get_string(self)
9877 
9878  def __eq__(self, *args):
9879  """__eq__(ParticleType self, ParticleType o) -> bool"""
9880  return _IMP_core.ParticleType___eq__(self, *args)
9881 
9882  def __ne__(self, *args):
9883  """__ne__(ParticleType self, ParticleType o) -> bool"""
9884  return _IMP_core.ParticleType___ne__(self, *args)
9885 
9886  def __lt__(self, *args):
9887  """__lt__(ParticleType self, ParticleType o) -> bool"""
9888  return _IMP_core.ParticleType___lt__(self, *args)
9889 
9890  def __gt__(self, *args):
9891  """__gt__(ParticleType self, ParticleType o) -> bool"""
9892  return _IMP_core.ParticleType___gt__(self, *args)
9893 
9894  def __ge__(self, *args):
9895  """__ge__(ParticleType self, ParticleType o) -> bool"""
9896  return _IMP_core.ParticleType___ge__(self, *args)
9897 
9898  def __le__(self, *args):
9899  """__le__(ParticleType self, ParticleType o) -> bool"""
9900  return _IMP_core.ParticleType___le__(self, *args)
9901 
9902  def __hash__(self):
9903  """__hash__(ParticleType self) -> std::size_t"""
9904  return _IMP_core.ParticleType___hash__(self)
9905 
9906  def show(self, *args):
9907  """
9908  show(ParticleType self, _ostream out=std::cout)
9909  show(ParticleType self)
9910  """
9911  return _IMP_core.ParticleType_show(self, *args)
9912 
9913  def add_alias(*args):
9914  """add_alias(ParticleType old_key, std::string new_name) -> ParticleType"""
9915  return _IMP_core.ParticleType_add_alias(*args)
9916 
9917  if _newclass:add_alias = staticmethod(add_alias)
9918  __swig_getmethods__["add_alias"] = lambda x: add_alias
9919  def get_index(self):
9920  """get_index(ParticleType self) -> unsigned int"""
9921  return _IMP_core.ParticleType_get_index(self)
9922 
9923  def show_all(*args):
9924  """show_all(_ostream out)"""
9925  return _IMP_core.ParticleType_show_all(*args)
9926 
9927  if _newclass:show_all = staticmethod(show_all)
9928  __swig_getmethods__["show_all"] = lambda x: show_all
9929  def get_all_strings():
9930  """get_all_strings() -> IMP::base::Vector< std::string >"""
9931  return _IMP_core.ParticleType_get_all_strings()
9932 
9933  if _newclass:get_all_strings = staticmethod(get_all_strings)
9934  __swig_getmethods__["get_all_strings"] = lambda x: get_all_strings
9935  def get_number_unique():
9936  """get_number_unique() -> unsigned int"""
9937  return _IMP_core.ParticleType_get_number_unique()
9938 
9939  if _newclass:get_number_unique = staticmethod(get_number_unique)
9940  __swig_getmethods__["get_number_unique"] = lambda x: get_number_unique
9941  def __str__(self):
9942  """__str__(ParticleType self) -> std::string"""
9943  return _IMP_core.ParticleType___str__(self)
9944 
9945  def __repr__(self):
9946  """__repr__(ParticleType self) -> std::string"""
9947  return _IMP_core.ParticleType___repr__(self)
9948 
9949  __swig_destroy__ = _IMP_core.delete_ParticleType
9950  __del__ = lambda self : None;
9951 ParticleType_swigregister = _IMP_core.ParticleType_swigregister
9952 ParticleType_swigregister(ParticleType)
9953 
9954 def ParticleType_add_key(*args):
9955  """ParticleType_add_key(std::string sc) -> unsigned int"""
9956  return _IMP_core.ParticleType_add_key(*args)
9957 
9958 def ParticleType_get_key_exists(*args):
9959  """ParticleType_get_key_exists(std::string sc) -> bool"""
9960  return _IMP_core.ParticleType_get_key_exists(*args)
9961 
9962 def ParticleType_add_alias(*args):
9963  """ParticleType_add_alias(ParticleType old_key, std::string new_name) -> ParticleType"""
9964  return _IMP_core.ParticleType_add_alias(*args)
9965 
9966 def ParticleType_show_all(*args):
9967  """ParticleType_show_all(_ostream out)"""
9968  return _IMP_core.ParticleType_show_all(*args)
9969 
9970 def ParticleType_get_all_strings():
9971  """ParticleType_get_all_strings() -> IMP::base::Vector< std::string >"""
9972  return _IMP_core.ParticleType_get_all_strings()
9973 
9974 def ParticleType_get_number_unique():
9975  """ParticleType_get_number_unique() -> unsigned int"""
9976  return _IMP_core.ParticleType_get_number_unique()
9977 
9979  """Proxy of C++ IMP::core::GenericAttributeSingletonScore<(UnaryFunction)> class"""
9980  __swig_setmethods__ = {}
9981  for _s in [IMP.kernel.SingletonScore]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
9982  __setattr__ = lambda self, name, value: _swig_setattr(self, AttributeSingletonScore, name, value)
9983  __swig_getmethods__ = {}
9984  for _s in [IMP.kernel.SingletonScore]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
9985  __getattr__ = lambda self, name: _swig_getattr(self, AttributeSingletonScore, name)
9986  __repr__ = _swig_repr
9987  def __init__(self, *args):
9988  """__init__(IMP::core::GenericAttributeSingletonScore<(UnaryFunction)> self, UnaryFunction f, FloatKey k) -> AttributeSingletonScore"""
9989  this = _IMP_core.new_AttributeSingletonScore(*args)
9990  try: self.this.append(this)
9991  except: self.this = this
9992  def do_get_inputs(self, *args):
9993  """do_get_inputs(AttributeSingletonScore self, Model m, IMP::kernel::ParticleIndexes const & pis) -> IMP::kernel::ModelObjectsTemp"""
9994  return _IMP_core.AttributeSingletonScore_do_get_inputs(self, *args)
9995 
9996  def get_version_info(self):
9997  """get_version_info(AttributeSingletonScore self) -> VersionInfo"""
9998  return _IMP_core.AttributeSingletonScore_get_version_info(self)
9999 
10000 AttributeSingletonScore_swigregister = _IMP_core.AttributeSingletonScore_swigregister
10001 AttributeSingletonScore_swigregister(AttributeSingletonScore)
10002 
10003 
10005  """create_attribute_singleton_score(UnaryFunction uf, FloatKey k) -> AttributeSingletonScore"""
10006  return _IMP_core.create_attribute_singleton_score(*args)
10007 class BoundingBox3DSingletonScore(IMP.kernel.SingletonScore):
10008  """Proxy of C++ IMP::core::GenericBoundingBox3DSingletonScore<(UnaryFunction)> class"""
10009  __swig_setmethods__ = {}
10010  for _s in [IMP.kernel.SingletonScore]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
10011  __setattr__ = lambda self, name, value: _swig_setattr(self, BoundingBox3DSingletonScore, name, value)
10012  __swig_getmethods__ = {}
10013  for _s in [IMP.kernel.SingletonScore]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
10014  __getattr__ = lambda self, name: _swig_getattr(self, BoundingBox3DSingletonScore, name)
10015  __repr__ = _swig_repr
10016  def __init__(self, *args):
10017  """__init__(IMP::core::GenericBoundingBox3DSingletonScore<(UnaryFunction)> self, UnaryFunction f, BoundingBox3D bb) -> BoundingBox3DSingletonScore"""
10018  this = _IMP_core.new_BoundingBox3DSingletonScore(*args)
10019  try: self.this.append(this)
10020  except: self.this = this
10021  def do_get_inputs(self, *args):
10022  """do_get_inputs(BoundingBox3DSingletonScore self, Model m, IMP::kernel::ParticleIndexes const & pis) -> IMP::kernel::ModelObjectsTemp"""
10023  return _IMP_core.BoundingBox3DSingletonScore_do_get_inputs(self, *args)
10024 
10025  def get_version_info(self):
10026  """get_version_info(BoundingBox3DSingletonScore self) -> VersionInfo"""
10027  return _IMP_core.BoundingBox3DSingletonScore_get_version_info(self)
10028 
10029 BoundingBox3DSingletonScore_swigregister = _IMP_core.BoundingBox3DSingletonScore_swigregister
10030 BoundingBox3DSingletonScore_swigregister(BoundingBox3DSingletonScore)
10031 
10032 
10033 def create_bounding_box_3d_singleton_score(*args):
10034  """create_bounding_box_3d_singleton_score(UnaryFunction f, BoundingBox3D bb) -> BoundingBox3DSingletonScore"""
10035  return _IMP_core.create_bounding_box_3d_singleton_score(*args)
10037  """Proxy of C++ IMP::core::GenericDistanceToSingletonScore<(UnaryFunction)> class"""
10038  __swig_setmethods__ = {}
10039  for _s in [IMP.kernel.SingletonScore]: __swig_setmethods__.update(getattr(_s,'__swig_setmethods__',{}))
10040  __setattr__ = lambda self, name, value: _swig_setattr(self, DistanceToSingletonScore, name, value)
10041  __swig_getmethods__ = {}
10042  for _s in [IMP.kernel.SingletonScore]: __swig_getmethods__.update(getattr(_s,'__swig_getmethods__',{}))
10043  __getattr__ = lambda self, name: _swig_getattr(self, DistanceToSingletonScore, name)
10044  __repr__ = _swig_repr
10045  def __init__(self, *args):
10046  """__init__(IMP::core::GenericDistanceToSingletonScore<(UnaryFunction)> self, UnaryFunction f, Vector3D pt) -> DistanceToSingletonScore"""
10047  this = _IMP_core.new_DistanceToSingletonScore(*args)
10048  try: self.this.append(this)
10049  except: self.this = this
10050  def do_get_inputs(self, *args):
10051  """do_get_inputs(DistanceToSingletonScore self, Model m, IMP::kernel::ParticleIndexes const & pis) -> IMP::kernel::ModelObjectsTemp"""
10052  return _IMP_core.DistanceToSingletonScore_do_get_inputs(self, *args)
10053 
10054  def get_version_info(self):
10055  """get_version_info(DistanceToSingletonScore self) -> VersionInfo"""
10056  return _IMP_core.DistanceToSingletonScore_get_version_info(self)
10057 
10058 DistanceToSingletonScore_swigregister = _IMP_core.DistanceToSingletonScore_swigregister
10059 DistanceToSingletonScore_swigregister(DistanceToSingletonScore)
10060 
10061 
10062 def create_distance_to_singleton_score(*args):
10063  """create_distance_to_singleton_score(UnaryFunction f, Vector3D pt) -> DistanceToSingletonScore"""
10064  return _IMP_core.create_distance_to_singleton_score(*args)
10065 
10066 def get_module_version():
10067  """get_module_version() -> std::string const"""
10068  return _IMP_core.get_module_version()
10069 
10070 def get_example_path(*args):
10071  """get_example_path(std::string fname) -> std::string"""
10072  return _IMP_core.get_example_path(*args)
10073 
10074 def get_data_path(*args):
10075  """get_data_path(std::string fname) -> std::string"""
10076  return _IMP_core.get_data_path(*args)
10077 import _version_check
10078 _version_check.check_version(get_module_version())
10079 
10080 # This file is compatible with both classic and new-style classes.
10081 
10082 
F visit_breadth_first(HD d, F f)
Apply the visitor to each particle, breadth first.
A base class for geometry contained in particles.
GenericDistanceToSingletonScore< UnaryFunction > DistanceToSingletonScore
Hierarchies get_leaves(Hierarchy h)
double get_kt(double T)
Return kT for a given temperature.
ParticleIndexes get_indexes(const ParticlesTemp &ps)
double get_mean(const cv::Mat &mat, const cvIntMat &mask)
Ints get_index(const kernel::ParticlesTemp &particles, const Subset &subset, const Subsets &excluded)
Sphere3D get_enclosing_sphere(const Sphere3Ds &ss)
Return a sphere containing the listed spheres.
F visit_depth_first(HD d, F &f)
Apply functor F to each particle, traversing the hierarchy depth first.
A base class for geometry contained in particles.
void add_restraints(RMF::FileHandle fh, const kernel::Restraints &hs)
Shared optimizer state that is invoked upon commitment of new coordinates.
A base class for geometry from a set of particles.
double get_dihedral(XYZ a, XYZ b, XYZ c, XYZ d)
Compute the dihedral angle (in radians) between the four particles.
Make CGAL functionality available to IMP.
void set_check_level(CheckLevel tf)
Control runtime checks in the code.
Definition: exception.h:73
algebra::ReferenceFrame3D get_initial_reference_frame(kernel::Model *m, const kernel::ParticleIndexes &pis)
Low level functionality (logging, error handling, profiling, command line flags etc) that is used by ...
Abstract predicate function.
void add_rigid_body_cache_key(ObjectKey k)
kernel::RestraintsTemp get_restraints(const Subset &s, const ParticleStatesTable *pst, const DependencyGraph &dg, kernel::RestraintSet *rs)
Represents a scoring function on the model.
Abstract single variable functor class for score functions.
ScoreStates maintain invariants in the Model.
Composable functors to implement scores via compile-time composition.
GenericHierarchies get_all_descendants(Hierarchy mhd)
Get all the particles in the subtree.
A base class for geometry from a set of particles.
A base class for modifiers of kernel::ParticlesTemp.
Abstract predicate function.
void assign_blame(const kernel::RestraintsTemp &rs, const kernel::ParticlesTemp &ps, FloatKey attribute)
Abstract class for scoring object(s) of type ParticlePair.
IMP::algebra::Transformation3D get_transformation_aligning_first_to_second(const Vector3DsOrXYZs0 &source, const Vector3DsOrXYZs1 &target)
Compute the rigid transform bringing the first point set to the second.
display::Geometries create_blame_geometries(const kernel::RestraintsTemp &rs, const kernel::ParticlesTemp &ps, double max=NO_MAX, std::string name=std::string())
Hierarchy get_root(Hierarchy h)
Return the root of the hierarchy.
double get_distance(const Plane3D &pln, const Vector3D &p)
Return the distance between a plane and a point in 3D.
Definition: Plane3D.h:71
void transform(Hierarchy h, const algebra::Transformation3D &tr)
Transform a hierarchy. This is aware of rigid bodies.
void add_particles(RMF::FileHandle fh, const kernel::ParticlesTemp &hs)
BoundingBoxD< 3 > get_bounding_box(const Cone3D &g)
Definition: Cone3D.h:64
Base functionality and abstract base classes for representation, scoring and sampling.
GenericAttributeSingletonScore< UnaryFunction > AttributeSingletonScore
A restraint is a term in an IMP ScoringFunction.
XYZRs create_xyzr_particles(kernel::Model *m, unsigned int num, Float radius, Float box_side=10)
Create a set of particles with random coordinates.
void set_vector_geometry(C &g, const E &v)
Definition: VectorD.h:423
Abstract predicate function.
GenericHierarchies get_internal(Hierarchy mhd)
Get all the non-leaves of the bit of hierarchy.
Common base class for heavy weight IMP objects.
Definition: Object.h:106
Base class for all optimizers.
Abstract predicate function.
Base class for optimizers that act on individual attributes.
Key< 34897493, true > ParticleType
Definition: Typed.h:30
Vector3D get_centroid(const Vector3Ds &ps)
Returns the centroid of a set of vectors.
Definition: Vector3D.h:56
General purpose algebraic and geometric methods that are expected to be used by a wide variety of IMP...
void show(Hierarchy h, std::ostream &out=std::cout)
Print out a molecular hierarchy.
Abstract class for scoring object(s) of type Particle.
Base class for all samplers.
void show_rigid_body_hierarchy(RigidBody rb, base::TextOutput out=base::TextOutput(std::cout))
kernel::ParticlesTemp create_rigid_bodies(kernel::Model *m, unsigned int n, bool no_members=false)
kernel::ParticleIndex get_root_rigid_body(RigidMember m)
Return the index of the outer-most rigid body containing the member.
void set_enclosing_radius(XYZR b, const XYZs &v)
Set the radius of the first to enclose the list.
Implement a constraint on the Model.
TruncatedHarmonic< BOTH > TruncatedHarmonicBound
A specialization.
TruncatedHarmonic< UPPER > TruncatedHarmonicUpperBound
A specialization for the upper bound.
BallMover
Definition: BallMover.py:1
void add_particle(RMF::FileHandle fh, kernel::Particle *hs)
Output IMP model data in various file formats.
CheckLevel get_check_level()
Get the current audit mode.
Definition: exception.h:81
Abstract class to implement hierarchical methods.
void add_restraint(RMF::FileHandle fh, kernel::Restraint *hs)
Abstract class for scoring object(s) of type ParticleTriplet.
kernel::Restraint * create_restraint(Score *s, Container *c, std::string name=std::string())
void set_enclosing_sphere(XYZR b, const XYZs &v, double slack=0)
Set the coordinates and radius of the first to enclose the list.
TruncatedHarmonic< LOWER > TruncatedHarmonicLowerBound
A specialization for the lower bound.
GenericAttributeSingletonScore< UF > * create_attribute_singleton_score(UF *uf, FloatKey k)