bond_decorators.h File Reference

Contains decorators for a bond. More...

#include <IMP/atom/atom_config.h>
#include <IMP/core/internal/graph_base.h>
#include "internal/bond_helpers.h"
#include <IMP/display/particle_geometry.h>
#include <IMP/display/primitive_geometries.h>
#include <IMP/kernel/Particle.h>
#include <IMP/kernel/Model.h>
#include <IMP/Decorator.h>
#include <IMP/core/XYZ.h>
#include <IMP/kernel/internal/IndexingIterator.h>

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Classes
class	IMP::atom::Bond
	A decorator for wrapping a particle representing a molecular bond. More...
class	IMP::atom::Bonded
	A decorator for a particle which has bonds. More...
class	IMP::atom::BondGeometry
	Display a Bond particle as a segment. More...
class	IMP::atom::BondsGeometry
	Display an IMP::SingletonContainer of Bond particles as segments. More...

Namespaces
	IMP
	Synonym for IMP::kernel.
	IMP::atom
	Functionality for loading, creating, manipulating and scoring atomic structures.

Typedefs
typedef IMP::base::Vector< Bonded >	IMP::atom::Bondeds
typedef IMP::base::Vector< Bond >	IMP::atom::Bonds

Functions
Bond	IMP::atom::create_bond (Bonded a, Bonded b, Int t)
	Connect the two wrapped particles by a bond. More...
Bond	IMP::atom::create_bond (Bonded a, Bonded b, Bond o)
	Connect the two wrapped particles by a custom bond. More...
Bond	IMP::atom::create_custom_bond (Bonded a, Bonded b, Float length, Float stiffness=-1)
	Connect the two wrapped particles by a custom bond. More...
void	IMP::atom::destroy_bond (Bond b)
	Destroy the bond connecting two particles. More...
Bond	IMP::atom::get_bond (Bonded a, Bonded b)
	Get the bond between two particles. More...

Detailed Description

Contains decorators for a bond.

Copyright 2007-2014 IMP Inventors. All rights reserved.

Definition in file bond_decorators.h.