IMP  2.3.1
The Integrative Modeling Platform
SecondaryStructureResidue.h File Reference

A decorator for storing secondary structure probabilities. Copyright 2007-2014 IMP Inventors. All rights reserved. More...

#include "atom_config.h"
#include "atom_macros.h"
#include "Hierarchy.h"
#include <IMP/base_types.h>
#include <IMP/kernel/Particle.h>
#include <IMP/kernel/Model.h>
#include <IMP/Decorator.h>
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Classes

class  IMP::atom::SecondaryStructureResidue
 A decorator for a residue with probability of secondary structure. More...
 

Namespaces

 IMP
 Synonym for IMP::kernel.
 
 IMP::atom
 Functionality for loading, creating, manipulating and scoring atomic structures.
 

Typedefs

typedef IMP::base::Vector
< SecondaryStructureResidue > 
IMP::atom::SecondaryStructureResidues
 

Functions

Float IMP::atom::get_secondary_structure_match_score (SecondaryStructureResidue ssr1, SecondaryStructureResidue ssr2)
 Compares the secondary structure probabilities of two residues. More...
 
SecondaryStructureResidue IMP::atom::setup_coarse_secondary_structure_residue (const kernel::Particles &ssr_ps, kernel::Model *mdl, bool winner_takes_all_per_res=false)
 Coarsen some SecondaryStructureResidues. More...
 
SecondaryStructureResidues IMP::atom::setup_coarse_secondary_structure_residues (const kernel::Particles &ssr_ps, kernel::Model *mdl, int coarse_factor, int start_res_num, bool winner_takes_all_per_res=false)
 

Detailed Description

A decorator for storing secondary structure probabilities. Copyright 2007-2014 IMP Inventors. All rights reserved.

Definition in file SecondaryStructureResidue.h.