IMP
2.3.0
The Integrative Modeling Platform
IMP Mainpage
Modules
Applications
Related Pages
Groups
Classes
Files
Examples
Indexes
File List
File Members
kernel/SingletonPredicate.h
Go to the documentation of this file.
1
/**
2
* \file IMP/kernel/SingletonPredicate.h
3
* \brief Define SingletonPredicate.
4
*
5
* WARNING This file was generated from SingletonPredicate.h
6
* in /tmp/nightly-build-54722/imp-2.3.0/tools/build/container_templates/kernel
7
* by tools/build/make_containers.py.
8
*
9
* Copyright 2007-2014 IMP Inventors. All rights reserved.
10
*/
11
12
#ifndef IMPKERNEL_SINGLETON_PREDICATE_H
13
#define IMPKERNEL_SINGLETON_PREDICATE_H
14
15
#include <IMP/kernel/kernel_config.h>
16
#include "
base_types.h
"
17
#include "
ParticleTuple.h
"
18
#include "
DerivativeAccumulator.h
"
19
#include "internal/container_helpers.h"
20
#include "
model_object_helpers.h
"
21
22
IMPKERNEL_BEGIN_NAMESPACE
23
24
//! Abstract predicate function
25
/** A predicate is a function which returns one of a discrete set of
26
values (eg -1, 0, 1 depending on whether a value is negative, zero
27
or positive). SingletonPredicates will evaluate the predicate for the passed
28
particles.
29
30
Implementers should check out IMP_SINGLETON_PREDICATE().
31
*/
32
class
IMPKERNELEXPORT
SingletonPredicate
:
public
ParticleInputs
,
33
public
base::Object
{
34
public
:
35
typedef
kernel::Particle
*
Argument
;
36
typedef
kernel::ParticleIndex
IndexArgument
;
37
SingletonPredicate
(std::string name =
"SingletonPredicate %1%"
);
38
/** \deprecated_at{2.1} Use the index based version.*/
39
IMPKERNEL_DEPRECATED_METHOD_DECL(2.1)
40
virtual
int
get_value(
kernel::Particle
* vt)
const
;
41
42
/** \deprecated_at{2.1} Use the index based version.*/
43
IMPKERNEL_DEPRECATED_METHOD_DECL(2.1)
44
virtual
Ints
get_value(
const
kernel::ParticlesTemp
&o)
const
;
45
46
#if !defined(IMP_DOXYGEN) && !defined(SWIG)
47
virtual
void
remove_if_equal(
kernel::Model
*m,
kernel::ParticleIndexes
&ps,
48
int
v)
const
;
49
virtual
void
remove_if_not_equal(
kernel::Model
*m,
kernel::ParticleIndexes
&ps,
50
int
v)
const
;
51
#endif
52
53
//! Compute the predicate and the derivative if needed.
54
virtual
int
get_value_index(
kernel::Model
*m,
kernel::ParticleIndex
vt)
const
;
55
56
//! Enable them to be use as functors
57
/** But beware of slicing.
58
*/
59
int
operator()
(
kernel::Model
*m,
kernel::ParticleIndex
vt)
const
{
60
return
get_value_index(m, vt);
61
}
62
63
virtual
Ints
get_value_index(
kernel::Model
*m,
64
const
kernel::ParticleIndexes
&o)
const
{
65
Ints
ret(o.size());
66
for
(
unsigned
int
i = 0; i < o.size(); ++i) {
67
ret[i] += get_value_index(m, o[i]);
68
}
69
return
ret;
70
}
71
72
IMP_REF_COUNTED_DESTRUCTOR
(
SingletonPredicate
);
73
};
74
75
IMPKERNEL_END_NAMESPACE
76
77
#endif
/* IMPKERNEL_SINGLETON_PREDICATE_H */
DerivativeAccumulator.h
Class for adding derivatives from restraints to the model.
base_types.h
Basic types used by IMP.
IMP::SingletonPredicate
IMP::kernel::SingletonPredicate SingletonPredicate
Definition:
kernel/doxygen.h:227
IMP_REF_COUNTED_DESTRUCTOR
#define IMP_REF_COUNTED_DESTRUCTOR(Name)
Ref counted objects should have private destructors.
Definition:
ref_counted_macros.h:60
IMP::base::Vector< Int >
model_object_helpers.h
Single variable function.
IMP::kernel::ParticleInputs
Definition:
kernel/model_object_helpers.h:18
IMP::kernel::Particle
Class to handle individual model particles.
Definition:
kernel/Particle.h:37
IMP::base::Index< ParticleIndexTag >
IMP::base::Object
Common base class for heavy weight IMP objects.
Definition:
Object.h:106
IMP::kernel::SingletonPredicate
Abstract predicate function.
Definition:
kernel/SingletonPredicate.h:32
ParticleTuple.h
Classes to handle individual model particles.
IMP::kernel::SingletonPredicate::operator()
int operator()(kernel::Model *m, kernel::ParticleIndex vt) const
Enable them to be use as functors.
Definition:
kernel/SingletonPredicate.h:59
IMP::kernel::Model
Class for storing model, its restraints, constraints, and particles.
Definition:
kernel/Model.h:73