SecondaryStructureResidue.h File Reference

A decorator for storing secondary structure probabilities. Copyright 2007-2014 IMP Inventors. All rights reserved. More...

#include "atom_config.h"
#include "atom_macros.h"
#include "Hierarchy.h"
#include <IMP/base_types.h>
#include <IMP/kernel/Particle.h>
#include <IMP/kernel/Model.h>
#include <IMP/Decorator.h>

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Classes
class	IMP::atom::SecondaryStructureResidue
	A decorator for a residue with probability of secondary structure. More...

Namespaces
	IMP
	Synonym for IMP::kernel.
	IMP::atom
	Functionality for loading, creating, manipulating and scoring atomic structures.

Typedefs
typedef IMP::base::Vector < SecondaryStructureResidue >	IMP::atom::SecondaryStructureResidues

Functions
Float	IMP::atom::get_secondary_structure_match_score (SecondaryStructureResidue ssr1, SecondaryStructureResidue ssr2)
	Compares the secondary structure probabilities of two residues. More...
SecondaryStructureResidue	IMP::atom::setup_coarse_secondary_structure_residue (const kernel::Particles &ssr_ps, kernel::Model *mdl, bool winner_takes_all_per_res=false)
	Coarsen some SecondaryStructureResidues. More...
SecondaryStructureResidues	IMP::atom::setup_coarse_secondary_structure_residues (const kernel::Particles &ssr_ps, kernel::Model *mdl, int coarse_factor, int start_res_num, bool winner_takes_all_per_res=false)

Detailed Description

A decorator for storing secondary structure probabilities. Copyright 2007-2014 IMP Inventors. All rights reserved.

Definition in file SecondaryStructureResidue.h.