IMP::em::PCAFitRestraint Member List

This is the complete list of members for IMP::em::PCAFitRestraint, including all inherited members.

add_particle(kernel::Particle *obj) (defined in IMP::em::PCAFitRestraint)	IMP::em::PCAFitRestraint
add_particles(const kernel::Particles &objs) (defined in IMP::em::PCAFitRestraint)	IMP::em::PCAFitRestraint
add_score_and_derivatives(ScoreAccumulator sa) const	IMP::kernel::Restraint
clear_caches()	IMP::base::Object	virtual
clear_particles() (defined in IMP::em::PCAFitRestraint)	IMP::em::PCAFitRestraint
create_current_decomposition() const	IMP::kernel::Restraint
create_decomposition() const	IMP::kernel::Restraint
create_scoring_function(double weight=1.0, double max=NO_MAX) const	IMP::kernel::Restraint	virtual
do_add_score_and_derivatives(ScoreAccumulator sa) const	IMP::kernel::Restraint	protectedvirtual
do_create_current_decomposition() const	IMP::kernel::Restraint	protectedvirtual
do_create_decomposition() const	IMP::kernel::Restraint	protectedvirtual
do_destroy()	IMP::base::Object	virtual
do_get_inputs() const	IMP::em::PCAFitRestraint	virtual
do_get_interactions() const	IMP::kernel::ModelObject	protectedvirtual
do_get_outputs() const	IMP::kernel::Restraint	protectedvirtual
get_check_level() const (defined in IMP::base::Object)	IMP::base::Object
get_has_dependencies() const	IMP::kernel::ModelObject
get_has_particles() (defined in IMP::em::PCAFitRestraint)	IMP::em::PCAFitRestraint
get_has_required_score_states() const	IMP::kernel::ModelObject
get_inputs() const	IMP::kernel::ModelObject
get_interactions() const	IMP::kernel::ModelObject
get_last_score() const	IMP::kernel::Restraint	virtual
get_log_level() const (defined in IMP::base::Object)	IMP::base::Object
get_maximum_score() const (defined in IMP::kernel::Restraint)	IMP::kernel::Restraint
get_model() const (defined in IMP::kernel::ModelObject)	IMP::kernel::ModelObject
get_name() const (defined in IMP::base::Object)	IMP::base::Object
get_number_of_particles() const (defined in IMP::em::PCAFitRestraint)	IMP::em::PCAFitRestraint
get_outputs() const	IMP::kernel::ModelObject
get_particle(unsigned int i) const (defined in IMP::em::PCAFitRestraint)	IMP::em::PCAFitRestraint
get_particles() const (defined in IMP::em::PCAFitRestraint)	IMP::em::PCAFitRestraint
get_required_score_states() const	IMP::kernel::ModelObject
get_score() const	IMP::kernel::Restraint
get_type_name() const (defined in IMP::em::PCAFitRestraint)	IMP::em::PCAFitRestraint	virtual
get_version_info() const	IMP::em::PCAFitRestraint	virtual
get_was_good() const	IMP::kernel::Restraint
get_weight() const (defined in IMP::kernel::Restraint)	IMP::kernel::Restraint
handle_set_has_required_score_states(bool)	IMP::kernel::ModelObject	protectedvirtual
ModelObject(kernel::Model *m, std::string name) (defined in IMP::kernel::ModelObject)	IMP::kernel::ModelObject
NonCopyable() (defined in IMP::base::NonCopyable)	IMP::base::NonCopyable	protected
Object(std::string name)	IMP::base::Object	protected
PCAFitRestraint(kernel::ParticlesTemp ps, DensityMap *em_map, float threahold, float max_pca_size_diff, float max_angle_diff, float max_centroid_diff, FloatKey weight_key=atom::Mass::get_mass_key())	IMP::em::PCAFitRestraint
remove_particle(kernel::Particle *d) (defined in IMP::em::PCAFitRestraint)	IMP::em::PCAFitRestraint
remove_particles(const kernel::Particles &d) (defined in IMP::em::PCAFitRestraint)	IMP::em::PCAFitRestraint
reserve_particles(unsigned int sz) (defined in IMP::em::PCAFitRestraint)	IMP::em::PCAFitRestraint
Restraint(kernel::Model *m, std::string name)	IMP::kernel::Restraint
set_check_level(CheckLevel l)	IMP::base::Object
set_has_dependencies(bool tf)	IMP::kernel::ModelObject
set_has_required_score_states(bool tf)	IMP::kernel::ModelObject
set_log_level(LogLevel l)	IMP::base::Object
set_maximum_score(double s) (defined in IMP::kernel::Restraint)	IMP::kernel::Restraint
set_name(std::string name) (defined in IMP::base::Object)	IMP::base::Object
set_particles(const kernel::Particles &ps) (defined in IMP::em::PCAFitRestraint)	IMP::em::PCAFitRestraint
set_particles_order(const kernel::Particles &objs) (defined in IMP::em::PCAFitRestraint)	IMP::em::PCAFitRestraint
set_was_used(bool tf) const	IMP::base::Object
set_weight(Float weight) (defined in IMP::kernel::Restraint)	IMP::kernel::Restraint
show(std::ostream &out=std::cout) const (defined in IMP::base::Object)	IMP::base::Object
unprotected_evaluate(IMP::kernel::DerivativeAccumulator *accum) const (defined in IMP::em::PCAFitRestraint)	IMP::em::PCAFitRestraint	virtual
~ModelObject() (defined in IMP::kernel::ModelObject)	IMP::kernel::ModelObject
~Object() (defined in IMP::base::Object)	IMP::base::Object	virtual
~PCAFitRestraint() (defined in IMP::em::PCAFitRestraint)	IMP::em::PCAFitRestraint	protectedvirtual