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IMP
2.2.1
The Integrative Modeling Platform
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IMP
2.2.1
The Integrative Modeling Platform
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This is the complete list of members for IMP::atom::LennardJones, including all inherited members.
| add_to_derivative(int i, Float v, DerivativeAccumulator &d) | IMP::core::XYZ | |
| add_to_derivatives(const algebra::Vector3D &v, DerivativeAccumulator &d) | IMP::core::XYZ | |
| add_to_radius_derivative(double v, DerivativeAccumulator &d) (defined in IMP::core::XYZR) | IMP::core::XYZR | |
| decorate_particle(::IMP::kernel::Particle *p) | IMP::atom::LennardJones | static |
| Decorator(Model *m, ParticleIndex pi) (defined in IMP::kernel::Decorator) | IMP::kernel::Decorator | protected |
| Decorator() (defined in IMP::kernel::Decorator) | IMP::kernel::Decorator | protected |
| Decorator(ParticleAdaptor p) (defined in IMP::kernel::Decorator) | IMP::kernel::Decorator | explicitprotected |
| get_coordinate(int i) const | IMP::core::XYZ | |
| get_coordinate_key(unsigned int i) (defined in IMP::core::XYZ) | IMP::core::XYZ | static |
| get_coordinates() const | IMP::core::XYZ | |
| get_coordinates_are_optimized() const | IMP::core::XYZ | |
| get_derivative(int i) const | IMP::core::XYZ | |
| get_derivatives() const | IMP::core::XYZ | |
| get_is_setup(const IMP::kernel::ParticleAdaptor &p) (defined in IMP::atom::LennardJones) | IMP::atom::LennardJones | static |
| get_is_setup(kernel::Model *m, kernel::ParticleIndex pi) | IMP::atom::LennardJones | static |
| get_model() const | IMP::kernel::Decorator | |
| get_particle() const | IMP::kernel::Decorator | |
| get_particle_index() const | IMP::kernel::Decorator | |
| get_radius() const (defined in IMP::core::XYZR) | IMP::core::XYZR | |
| get_radius_key() | IMP::core::XYZR | static |
| get_sphere() const | IMP::core::XYZR | |
| get_vector_to(const XYZ &b) const | IMP::core::XYZ | |
| get_well_depth() const (defined in IMP::atom::LennardJones) | IMP::atom::LennardJones | |
| get_well_depth_key() (defined in IMP::atom::LennardJones) | IMP::atom::LennardJones | static |
| get_x() const (defined in IMP::core::XYZ) | IMP::core::XYZ | |
| get_xyz_keys() | IMP::core::XYZ | static |
| get_y() const (defined in IMP::core::XYZ) | IMP::core::XYZ | |
| get_z() const (defined in IMP::core::XYZ) | IMP::core::XYZ | |
| LennardJones() (defined in IMP::atom::LennardJones) | IMP::atom::LennardJones | |
| LennardJones(::IMP::kernel::Model *m,::IMP::kernel::ParticleIndex id) (defined in IMP::atom::LennardJones) | IMP::atom::LennardJones | |
| LennardJones(const IMP::kernel::ParticleAdaptor &d) (defined in IMP::atom::LennardJones) | IMP::atom::LennardJones | explicit |
| operator Particle *() const (defined in IMP::kernel::Decorator) | IMP::kernel::Decorator | |
| operator ParticleIndex() const (defined in IMP::kernel::Decorator) | IMP::kernel::Decorator | |
| operator->() const (defined in IMP::kernel::Decorator) | IMP::kernel::Decorator | |
| set_coordinate(unsigned int i, Float v) | IMP::core::XYZ | |
| set_coordinates(const algebra::Vector3D &v) | IMP::core::XYZ | |
| set_coordinates_are_optimized(bool tf) const | IMP::core::XYZ | |
| set_radius(double r) const (defined in IMP::core::XYZR) | IMP::core::XYZR | |
| set_sphere(const algebra::Sphere3D &s) | IMP::core::XYZR | |
| set_well_depth(Float well_depth) (defined in IMP::atom::LennardJones) | IMP::atom::LennardJones | |
| set_x(Float t) (defined in IMP::core::XYZ) | IMP::core::XYZ | |
| set_y(Float t) (defined in IMP::core::XYZ) | IMP::core::XYZ | |
| set_z(Float t) (defined in IMP::core::XYZ) | IMP::core::XYZ | |
| setup_particle(kernel::Model *m, ParticleIndex pi) | IMP::atom::LennardJones | static |
| setup_particle(IMP::kernel::ParticleAdaptor decorator) (defined in IMP::atom::LennardJones) | IMP::atom::LennardJones | static |
| setup_particle(kernel::Model *m, ParticleIndex pi, Float well_depth) | IMP::atom::LennardJones | static |
| setup_particle(IMP::kernel::ParticleAdaptor decorator, Float well_depth) | IMP::atom::LennardJones | static |
| IMP::core::XYZR::setup_particle(kernel::Model *m, ParticleIndex pi, algebra::Sphere3D ball) | IMP::core::XYZR | static |
| IMP::core::XYZR::setup_particle(IMP::kernel::ParticleAdaptor decorator, algebra::Sphere3D ball) | IMP::core::XYZR | static |
| IMP::core::XYZ::setup_particle(kernel::Model *m, ParticleIndex pi, algebra::Vector3D v) | IMP::core::XYZ | static |
| IMP::core::XYZ::setup_particle(IMP::kernel::ParticleAdaptor decorator, algebra::Vector3D v) | IMP::core::XYZ | static |
| show(std::ostream &out=std::cout) const (defined in IMP::atom::LennardJones) | IMP::atom::LennardJones | |
| Value() (defined in IMP::base::Value) | IMP::base::Value | protected |
| XYZ() (defined in IMP::core::XYZ) | IMP::core::XYZ | |
| XYZ(::IMP::kernel::Model *m,::IMP::kernel::ParticleIndex id) (defined in IMP::core::XYZ) | IMP::core::XYZ | |
| XYZ(const IMP::kernel::ParticleAdaptor &d) (defined in IMP::core::XYZ) | IMP::core::XYZ | explicit |
| XYZR() (defined in IMP::core::XYZR) | IMP::core::XYZR | |
| XYZR(::IMP::kernel::Model *m,::IMP::kernel::ParticleIndex id) (defined in IMP::core::XYZR) | IMP::core::XYZR | |
| XYZR(const IMP::kernel::ParticleAdaptor &d) (defined in IMP::core::XYZR) | IMP::core::XYZR | explicit |