IMP  2.2.1
The Integrative Modeling Platform
IMP::atom::LennardJones Member List

This is the complete list of members for IMP::atom::LennardJones, including all inherited members.

add_to_derivative(int i, Float v, DerivativeAccumulator &d)IMP::core::XYZ
add_to_derivatives(const algebra::Vector3D &v, DerivativeAccumulator &d)IMP::core::XYZ
add_to_radius_derivative(double v, DerivativeAccumulator &d) (defined in IMP::core::XYZR)IMP::core::XYZR
decorate_particle(::IMP::kernel::Particle *p)IMP::atom::LennardJonesstatic
Decorator(Model *m, ParticleIndex pi) (defined in IMP::kernel::Decorator)IMP::kernel::Decoratorprotected
Decorator() (defined in IMP::kernel::Decorator)IMP::kernel::Decoratorprotected
Decorator(ParticleAdaptor p) (defined in IMP::kernel::Decorator)IMP::kernel::Decoratorexplicitprotected
get_coordinate(int i) const IMP::core::XYZ
get_coordinate_key(unsigned int i) (defined in IMP::core::XYZ)IMP::core::XYZstatic
get_coordinates() const IMP::core::XYZ
get_coordinates_are_optimized() const IMP::core::XYZ
get_derivative(int i) const IMP::core::XYZ
get_derivatives() const IMP::core::XYZ
get_is_setup(const IMP::kernel::ParticleAdaptor &p) (defined in IMP::atom::LennardJones)IMP::atom::LennardJonesstatic
get_is_setup(kernel::Model *m, kernel::ParticleIndex pi)IMP::atom::LennardJonesstatic
get_model() const IMP::kernel::Decorator
get_particle() const IMP::kernel::Decorator
get_particle_index() const IMP::kernel::Decorator
get_radius() const (defined in IMP::core::XYZR)IMP::core::XYZR
get_radius_key()IMP::core::XYZRstatic
get_sphere() const IMP::core::XYZR
get_vector_to(const XYZ &b) const IMP::core::XYZ
get_well_depth() const (defined in IMP::atom::LennardJones)IMP::atom::LennardJones
get_well_depth_key() (defined in IMP::atom::LennardJones)IMP::atom::LennardJonesstatic
get_x() const (defined in IMP::core::XYZ)IMP::core::XYZ
get_xyz_keys()IMP::core::XYZstatic
get_y() const (defined in IMP::core::XYZ)IMP::core::XYZ
get_z() const (defined in IMP::core::XYZ)IMP::core::XYZ
LennardJones() (defined in IMP::atom::LennardJones)IMP::atom::LennardJones
LennardJones(::IMP::kernel::Model *m,::IMP::kernel::ParticleIndex id) (defined in IMP::atom::LennardJones)IMP::atom::LennardJones
LennardJones(const IMP::kernel::ParticleAdaptor &d) (defined in IMP::atom::LennardJones)IMP::atom::LennardJonesexplicit
operator Particle *() const (defined in IMP::kernel::Decorator)IMP::kernel::Decorator
operator ParticleIndex() const (defined in IMP::kernel::Decorator)IMP::kernel::Decorator
operator->() const (defined in IMP::kernel::Decorator)IMP::kernel::Decorator
set_coordinate(unsigned int i, Float v)IMP::core::XYZ
set_coordinates(const algebra::Vector3D &v)IMP::core::XYZ
set_coordinates_are_optimized(bool tf) const IMP::core::XYZ
set_radius(double r) const (defined in IMP::core::XYZR)IMP::core::XYZR
set_sphere(const algebra::Sphere3D &s)IMP::core::XYZR
set_well_depth(Float well_depth) (defined in IMP::atom::LennardJones)IMP::atom::LennardJones
set_x(Float t) (defined in IMP::core::XYZ)IMP::core::XYZ
set_y(Float t) (defined in IMP::core::XYZ)IMP::core::XYZ
set_z(Float t) (defined in IMP::core::XYZ)IMP::core::XYZ
setup_particle(kernel::Model *m, ParticleIndex pi)IMP::atom::LennardJonesstatic
setup_particle(IMP::kernel::ParticleAdaptor decorator) (defined in IMP::atom::LennardJones)IMP::atom::LennardJonesstatic
setup_particle(kernel::Model *m, ParticleIndex pi, Float well_depth)IMP::atom::LennardJonesstatic
setup_particle(IMP::kernel::ParticleAdaptor decorator, Float well_depth)IMP::atom::LennardJonesstatic
IMP::core::XYZR::setup_particle(kernel::Model *m, ParticleIndex pi, algebra::Sphere3D ball)IMP::core::XYZRstatic
IMP::core::XYZR::setup_particle(IMP::kernel::ParticleAdaptor decorator, algebra::Sphere3D ball)IMP::core::XYZRstatic
IMP::core::XYZ::setup_particle(kernel::Model *m, ParticleIndex pi, algebra::Vector3D v)IMP::core::XYZstatic
IMP::core::XYZ::setup_particle(IMP::kernel::ParticleAdaptor decorator, algebra::Vector3D v)IMP::core::XYZstatic
show(std::ostream &out=std::cout) const (defined in IMP::atom::LennardJones)IMP::atom::LennardJones
Value() (defined in IMP::base::Value)IMP::base::Valueprotected
XYZ() (defined in IMP::core::XYZ)IMP::core::XYZ
XYZ(::IMP::kernel::Model *m,::IMP::kernel::ParticleIndex id) (defined in IMP::core::XYZ)IMP::core::XYZ
XYZ(const IMP::kernel::ParticleAdaptor &d) (defined in IMP::core::XYZ)IMP::core::XYZexplicit
XYZR() (defined in IMP::core::XYZR)IMP::core::XYZR
XYZR(::IMP::kernel::Model *m,::IMP::kernel::ParticleIndex id) (defined in IMP::core::XYZR)IMP::core::XYZR
XYZR(const IMP::kernel::ParticleAdaptor &d) (defined in IMP::core::XYZR)IMP::core::XYZRexplicit