IMP  2.2.0
The Integrative Modeling Platform
IMP::em::FitRestraint Member List

This is the complete list of members for IMP::em::FitRestraint, including all inherited members.

add_particle(kernel::Particle *obj) (defined in IMP::em::FitRestraint)IMP::em::FitRestraint
add_particles(const kernel::Particles &objs) (defined in IMP::em::FitRestraint)IMP::em::FitRestraint
add_score_and_derivatives(ScoreAccumulator sa) const IMP::kernel::Restraint
clear_caches()IMP::base::Objectvirtual
clear_particles() (defined in IMP::em::FitRestraint)IMP::em::FitRestraint
create_current_decomposition() const IMP::kernel::Restraint
create_decomposition() const IMP::kernel::Restraint
create_scoring_function(double weight=1.0, double max=NO_MAX) const IMP::kernel::Restraintvirtual
do_add_score_and_derivatives(ScoreAccumulator sa) const IMP::kernel::Restraintprotectedvirtual
do_create_current_decomposition() const IMP::kernel::Restraintprotectedvirtual
do_create_decomposition() const IMP::kernel::Restraintprotectedvirtual
do_destroy()IMP::base::Objectvirtual
do_get_inputs() const IMP::em::FitRestraintvirtual
do_get_interactions() const IMP::kernel::ModelObjectprotectedvirtual
do_get_outputs() const IMP::kernel::Restraintprotectedvirtual
FitRestraint(kernel::ParticlesTemp ps, DensityMap *em_map, FloatPair norm_factors=FloatPair(0., 0.), FloatKey weight_key=atom::Mass::get_mass_key(), float scale=1, bool use_rigid_bodies=true, KernelType kt=GAUSSIAN)IMP::em::FitRestraint
get_check_level() const (defined in IMP::base::Object)IMP::base::Object
get_has_dependencies() const IMP::kernel::ModelObject
get_has_particles() (defined in IMP::em::FitRestraint)IMP::em::FitRestraint
get_has_required_score_states() const IMP::kernel::ModelObject
get_inputs() const IMP::kernel::ModelObject
get_interactions() const IMP::kernel::ModelObject
get_last_score() const IMP::kernel::Restraintvirtual
get_log_level() const (defined in IMP::base::Object)IMP::base::Object
get_maximum_score() const (defined in IMP::kernel::Restraint)IMP::kernel::Restraint
get_model() const (defined in IMP::kernel::ModelObject)IMP::kernel::ModelObject
get_model_dens_map() const IMP::em::FitRestraint
get_name() const (defined in IMP::base::Object)IMP::base::Object
get_number_of_particles() const (defined in IMP::em::FitRestraint)IMP::em::FitRestraint
get_outputs() const IMP::kernel::ModelObject
get_particle(unsigned int i) const (defined in IMP::em::FitRestraint)IMP::em::FitRestraint
get_particles() const (defined in IMP::em::FitRestraint)IMP::em::FitRestraint
get_required_score_states() const IMP::kernel::ModelObject
get_scale_factor() const (defined in IMP::em::FitRestraint)IMP::em::FitRestraint
get_score() const IMP::kernel::Restraint
get_type_name() const (defined in IMP::em::FitRestraint)IMP::em::FitRestraintvirtual
get_version_info() const IMP::em::FitRestraintvirtual
get_was_good() const IMP::kernel::Restraint
get_weight() const (defined in IMP::kernel::Restraint)IMP::kernel::Restraint
handle_set_has_required_score_states(bool)IMP::kernel::ModelObjectprotectedvirtual
ModelObject(kernel::Model *m, std::string name) (defined in IMP::kernel::ModelObject)IMP::kernel::ModelObject
NonCopyable() (defined in IMP::base::NonCopyable)IMP::base::NonCopyableprotected
Object(std::string name)IMP::base::Objectprotected
remove_particle(kernel::Particle *d) (defined in IMP::em::FitRestraint)IMP::em::FitRestraint
remove_particles(const kernel::Particles &d) (defined in IMP::em::FitRestraint)IMP::em::FitRestraint
reserve_particles(unsigned int sz) (defined in IMP::em::FitRestraint)IMP::em::FitRestraint
Restraint(kernel::Model *m, std::string name)IMP::kernel::Restraint
set_check_level(CheckLevel l)IMP::base::Object
set_has_dependencies(bool tf)IMP::kernel::ModelObject
set_has_required_score_states(bool tf)IMP::kernel::ModelObject
set_log_level(LogLevel l)IMP::base::Object
set_maximum_score(double s) (defined in IMP::kernel::Restraint)IMP::kernel::Restraint
set_name(std::string name) (defined in IMP::base::Object)IMP::base::Object
set_particles(const kernel::Particles &ps) (defined in IMP::em::FitRestraint)IMP::em::FitRestraint
set_particles_order(const kernel::Particles &objs) (defined in IMP::em::FitRestraint)IMP::em::FitRestraint
set_scale_factor(float scale) (defined in IMP::em::FitRestraint)IMP::em::FitRestraint
set_was_used(bool tf) const IMP::base::Object
set_weight(Float weight) (defined in IMP::kernel::Restraint)IMP::kernel::Restraint
show(std::ostream &out=std::cout) const (defined in IMP::base::Object)IMP::base::Object
unprotected_evaluate(IMP::kernel::DerivativeAccumulator *accum) const (defined in IMP::em::FitRestraint)IMP::em::FitRestraintvirtual
~FitRestraint() (defined in IMP::em::FitRestraint)IMP::em::FitRestraintprotectedvirtual
~ModelObject() (defined in IMP::kernel::ModelObject)IMP::kernel::ModelObject
~Object() (defined in IMP::base::Object)IMP::base::Objectvirtual