accept() | IMP::core::MonteCarloMover | |
add_entry_point(double x, double y, double z) | IMP::core::RigidBodyTunneler | |
clear_caches() | IMP::base::Object | virtual |
do_accept() | IMP::core::MonteCarloMover | protectedvirtual |
do_destroy() | IMP::base::Object | virtual |
do_get_inputs() const | IMP::core::RigidBodyTunneler | protectedvirtual |
do_get_interactions() const | IMP::kernel::ModelObject | protectedvirtual |
do_get_outputs() const | IMP::core::MonteCarloMover | protectedvirtual |
do_propose() | IMP::core::RigidBodyTunneler | protectedvirtual |
do_reject() | IMP::core::RigidBodyTunneler | protectedvirtual |
get_check_level() const (defined in IMP::base::Object) | IMP::base::Object | |
get_has_dependencies() const | IMP::kernel::ModelObject | |
get_has_required_score_states() const | IMP::kernel::ModelObject | |
get_inputs() const | IMP::kernel::ModelObject | |
get_interactions() const | IMP::kernel::ModelObject | |
get_log_level() const (defined in IMP::base::Object) | IMP::base::Object | |
get_model() const (defined in IMP::kernel::ModelObject) | IMP::kernel::ModelObject | |
get_name() const (defined in IMP::base::Object) | IMP::base::Object | |
get_number_of_accepted() const (defined in IMP::core::MonteCarloMover) | IMP::core::MonteCarloMover | |
get_number_of_proposed() const (defined in IMP::core::MonteCarloMover) | IMP::core::MonteCarloMover | |
get_outputs() const | IMP::kernel::ModelObject | |
get_reduced_coordinates(kernel::Model *m, kernel::ParticleIndex target, kernel::ParticleIndex ref) | IMP::core::RigidBodyTunneler | static |
get_reduced_coordinates(kernel::Model *m, kernel::ParticleIndex pi) | IMP::core::RigidBodyTunneler | static |
get_required_score_states() const | IMP::kernel::ModelObject | |
get_type_name() const (defined in IMP::core::RigidBodyTunneler) | IMP::core::RigidBodyTunneler | virtual |
get_version_info() const | IMP::core::RigidBodyTunneler | virtual |
handle_set_has_required_score_states(bool) | IMP::kernel::ModelObject | protectedvirtual |
ModelObject(kernel::Model *m, std::string name) (defined in IMP::kernel::ModelObject) | IMP::kernel::ModelObject | |
MonteCarloMover(kernel::Model *m, std::string name) (defined in IMP::core::MonteCarloMover) | IMP::core::MonteCarloMover | |
NonCopyable() (defined in IMP::base::NonCopyable) | IMP::base::NonCopyable | protected |
Object(std::string name) | IMP::base::Object | protected |
propose() | IMP::core::MonteCarloMover | |
reject() | IMP::core::MonteCarloMover | |
reset_statistics() (defined in IMP::core::MonteCarloMover) | IMP::core::MonteCarloMover | |
RigidBodyTunneler(kernel::Model *m, kernel::ParticleIndex pi, kernel::ParticleIndex ref, double move_probability=1.) | IMP::core::RigidBodyTunneler | |
set_check_level(CheckLevel l) | IMP::base::Object | |
set_has_dependencies(bool tf) | IMP::kernel::ModelObject | |
set_has_required_score_states(bool tf) | IMP::kernel::ModelObject | |
set_log_level(LogLevel l) | IMP::base::Object | |
set_name(std::string name) (defined in IMP::base::Object) | IMP::base::Object | |
set_was_used(bool tf) const | IMP::base::Object | |
show(std::ostream &out=std::cout) const (defined in IMP::base::Object) | IMP::base::Object | |
~ModelObject() (defined in IMP::kernel::ModelObject) | IMP::kernel::ModelObject | |
~Object() (defined in IMP::base::Object) | IMP::base::Object | virtual |
~RigidBodyTunneler() (defined in IMP::core::RigidBodyTunneler) | IMP::core::RigidBodyTunneler | protectedvirtual |