IMP  2.1.0
The Integrative Modeling Platform
IMP::misc::CustomXYZR Member List

This is the complete list of members for IMP::misc::CustomXYZR, including all inherited members.

add_to_derivative(int i, Float v, DerivativeAccumulator &d)IMP::core::XYZ
add_to_derivatives(const algebra::Vector3D &v, DerivativeAccumulator &d)IMP::core::XYZ
add_to_radius_derivative(double v, DerivativeAccumulator &d) (defined in IMP::misc::CustomXYZR)IMP::misc::CustomXYZR
CustomXYZR() (defined in IMP::misc::CustomXYZR)IMP::misc::CustomXYZR
CustomXYZR(::IMP::kernel::Model *m,::IMP::kernel::ParticleIndex id, const FloatKey &tr=IMP::core::XYZR::get_radius_key()) (defined in IMP::misc::CustomXYZR)IMP::misc::CustomXYZR
CustomXYZR(const IMP::kernel::ParticleAdaptor &d, const FloatKey &tr=IMP::core::XYZR::get_radius_key()) (defined in IMP::misc::CustomXYZR)IMP::misc::CustomXYZRexplicit
decorate_particle(::IMP::kernel::Particle *p, const FloatKey &tr=IMP::core::XYZR::get_radius_key())IMP::misc::CustomXYZRstatic
IMP::core::XYZ::decorate_particle(::IMP::kernel::Particle *p)IMP::core::XYZstatic
Decorator(kernel::Model *m, ParticleIndex pi) (defined in IMP::kernel::Decorator)IMP::kernel::Decoratorprotected
Decorator() (defined in IMP::kernel::Decorator)IMP::kernel::Decoratorprotected
Decorator(ParticleAdaptor p) (defined in IMP::kernel::Decorator)IMP::kernel::Decoratorexplicitprotected
Decorator(Particle *p)IMP::kernel::Decorator
Decorator()IMP::kernel::Decorator
DecoratorTraits typedef (defined in IMP::misc::CustomXYZR)IMP::misc::CustomXYZR
get_coordinate(int i) const IMP::core::XYZ
get_coordinate_key(unsigned int i) (defined in IMP::core::XYZ)IMP::core::XYZstatic
get_coordinates() const IMP::core::XYZ
get_coordinates_are_optimized() const IMP::core::XYZ
get_decorator_traits() const (defined in IMP::misc::CustomXYZR)IMP::misc::CustomXYZR
get_default_decorator_traits() (defined in IMP::misc::CustomXYZR)IMP::misc::CustomXYZRstatic
get_default_radius_key()IMP::misc::CustomXYZRstatic
get_derivative(int i) const IMP::core::XYZ
get_derivatives() const IMP::core::XYZ
get_is_setup(const IMP::kernel::ParticleAdaptor &p, const FloatKey &tr=IMP::core::XYZR::get_radius_key()) (defined in IMP::misc::CustomXYZR)IMP::misc::CustomXYZRstatic
get_is_setup(kernel::Model *m, kernel::ParticleIndex pi, FloatKey radius_key=get_default_radius_key())IMP::misc::CustomXYZRstatic
get_is_setup(const IMP::kernel::ParticleAdaptor &p) (defined in IMP::core::XYZ)IMP::core::XYZstatic
get_is_setup(kernel::Model *m, kernel::ParticleIndex pi) (defined in IMP::core::XYZ)IMP::core::XYZstatic
IMP::kernel::Decorator::get_is_setup(Particle *p)IMP::kernel::Decoratorstatic
get_model() const IMP::kernel::Decorator
get_particle() const IMP::kernel::Decorator
get_particle_index() const (defined in IMP::kernel::Decorator)IMP::kernel::Decorator
get_radius() const (defined in IMP::misc::CustomXYZR)IMP::misc::CustomXYZR
get_sphere() const IMP::misc::CustomXYZR
get_traits() (defined in IMP::misc::CustomXYZR)IMP::misc::CustomXYZR
get_vector_to(const XYZ &b) const IMP::core::XYZ
get_x() const (defined in IMP::core::XYZ)IMP::core::XYZ
get_xyz_keys()IMP::core::XYZstatic
get_y() const (defined in IMP::core::XYZ)IMP::core::XYZ
get_z() const (defined in IMP::core::XYZ)IMP::core::XYZ
particle_is_instance(::IMP::kernel::Particle *p, const FloatKey &tr=IMP::core::XYZR::get_radius_key())IMP::misc::CustomXYZRstatic
particle_is_instance(IMP::kernel::Model *m, IMP::kernel::ParticleIndex pi, const FloatKey &tr=IMP::core::XYZR::get_radius_key())IMP::misc::CustomXYZRstatic
IMP::core::XYZ::particle_is_instance(::IMP::kernel::Particle *p)IMP::core::XYZstatic
IMP::core::XYZ::particle_is_instance(IMP::kernel::Model *m, IMP::kernel::ParticleIndex pi)IMP::core::XYZstatic
set_coordinate(unsigned int i, Float v)IMP::core::XYZ
set_coordinates(const algebra::Vector3D &v)IMP::core::XYZ
set_coordinates_are_optimized(bool tf) const IMP::core::XYZ
set_radius(Float t) (defined in IMP::misc::CustomXYZR)IMP::misc::CustomXYZR
set_sphere(const algebra::Sphere3D &s)IMP::misc::CustomXYZR
set_x(Float t) (defined in IMP::core::XYZ)IMP::core::XYZ
set_y(Float t) (defined in IMP::core::XYZ)IMP::core::XYZ
set_z(Float t) (defined in IMP::core::XYZ)IMP::core::XYZ
setup_particle(kernel::Model *m, ParticleIndex pi, DecoratorTraits tr=get_default_decorator_traits())IMP::misc::CustomXYZRstatic
setup_particle(IMP::kernel::ParticleAdaptor d, DecoratorTraits tr=get_default_decorator_traits()) (defined in IMP::misc::CustomXYZR)IMP::misc::CustomXYZRstatic
setup_particle(kernel::Model *m, ParticleIndex pi, double radius, DecoratorTraits tr=get_default_decorator_traits()) (defined in IMP::misc::CustomXYZR)IMP::misc::CustomXYZRstatic
setup_particle(IMP::kernel::ParticleAdaptor d, double radius, DecoratorTraits tr=get_default_decorator_traits()) (defined in IMP::misc::CustomXYZR)IMP::misc::CustomXYZRstatic
setup_particle(kernel::Model *m, ParticleIndex pi, algebra::Sphere3D ball, DecoratorTraits tr=get_default_decorator_traits()) (defined in IMP::misc::CustomXYZR)IMP::misc::CustomXYZRstatic
setup_particle(IMP::kernel::ParticleAdaptor d, algebra::Sphere3D ball, DecoratorTraits tr=get_default_decorator_traits()) (defined in IMP::misc::CustomXYZR)IMP::misc::CustomXYZRstatic
IMP::core::XYZ::setup_particle(kernel::Model *m, ParticleIndex pi)IMP::core::XYZstatic
setup_particle(IMP::kernel::ParticleAdaptor decorator) (defined in IMP::core::XYZ)IMP::core::XYZstatic
IMP::core::XYZ::setup_particle(kernel::Model *m, ParticleIndex pi, algebra::Vector3D v)IMP::core::XYZstatic
setup_particle(IMP::kernel::ParticleAdaptor decorator, algebra::Vector3D v) (defined in IMP::core::XYZ)IMP::core::XYZstatic
show(std::ostream &out=std::cout) const (defined in IMP::misc::CustomXYZR)IMP::misc::CustomXYZR
Value() (defined in IMP::base::Value)IMP::base::Valueprotected
XYZ() (defined in IMP::core::XYZ)IMP::core::XYZ
XYZ(::IMP::kernel::Model *m,::IMP::kernel::ParticleIndex id) (defined in IMP::core::XYZ)IMP::core::XYZ
XYZ(const IMP::kernel::ParticleAdaptor &d) (defined in IMP::core::XYZ)IMP::core::XYZexplicit