| add_edge(IMP::core::RigidBody parent, IMP::core::RigidBody child) | IMP::kinematics::KinematicForest | |
| add_edge(Joint *joint) | IMP::kinematics::KinematicForest | |
| add_rigid_bodies_in_chain(IMP::core::RigidBodies rbs) | IMP::kinematics::KinematicForest | |
| clear_caches() | IMP::base::Object | virtual |
| do_destroy() | IMP::base::Object | virtual |
| get_check_level() const (defined in IMP::base::Object) | IMP::base::Object | |
| get_coordinates_safe(IMP::core::RigidBody rb) const (defined in IMP::kinematics::KinematicForest) | IMP::kinematics::KinematicForest | |
| get_is_member(IMP::core::RigidBody rb) const (defined in IMP::kinematics::KinematicForest) | IMP::kinematics::KinematicForest | |
| get_log_level() const (defined in IMP::base::Object) | IMP::base::Object | |
| get_name() const (defined in IMP::base::Object) | IMP::base::Object | |
| get_ordered_joints() const (defined in IMP::kinematics::KinematicForest) | IMP::kinematics::KinematicForest | |
| get_reference_frame_safe(IMP::core::RigidBody rb) const (defined in IMP::kinematics::KinematicForest) | IMP::kinematics::KinematicForest | |
| get_type_name() const (defined in IMP::kinematics::KinematicForest) | IMP::kinematics::KinematicForest | virtual |
| get_version_info() const | IMP::kinematics::KinematicForest | virtual |
| KinematicForest(kernel::Model *m) (defined in IMP::kinematics::KinematicForest) | IMP::kinematics::KinematicForest | |
| KinematicForest(kernel::Model *m, IMP::atom::Hierarchy hierarchy) | IMP::kinematics::KinematicForest | |
| mark_external_coordinates_changed() | IMP::kinematics::KinematicForest | |
| mark_internal_coordinates_changed() | IMP::kinematics::KinematicForest | |
| NonCopyable() (defined in IMP::base::NonCopyable) | IMP::base::NonCopyable | protected |
| Object(std::string name) | IMP::base::Object | protected |
| Object() | IMP::base::Object | protected |
| operator<< (defined in IMP::kinematics::KinematicForest) | IMP::kinematics::KinematicForest | friend |
| reset_root(IMP::kernel::Particle *new_root) (defined in IMP::kinematics::KinematicForest) | IMP::kinematics::KinematicForest | |
| set_check_level(CheckLevel l) | IMP::base::Object | |
| set_coordinates_safe(IMP::core::RigidBody rb, IMP::algebra::Vector3D c) | IMP::kinematics::KinematicForest | |
| set_log_level(LogLevel l) | IMP::base::Object | |
| set_name(std::string name) (defined in IMP::base::Object) | IMP::base::Object | |
| set_reference_frame_safe(IMP::core::RigidBody rb, IMP::algebra::ReferenceFrame3D r) | IMP::kinematics::KinematicForest | |
| set_was_used(bool tf) const | IMP::base::Object | |
| show(std::ostream &out=std::cout) const (defined in IMP::base::Object) | IMP::base::Object | |
| update_all_external_coordinates() (defined in IMP::kinematics::KinematicForest) | IMP::kinematics::KinematicForest | |
| update_all_internal_coordinates() (defined in IMP::kinematics::KinematicForest) | IMP::kinematics::KinematicForest | |
