IMP  2.1.0
The Integrative Modeling Platform
IMP::container::ClosePairContainer Member List

This is the complete list of members for IMP::container::ClosePairContainer, including all inherited members.

add_pair_filter(PairPredicate *obj) (defined in IMP::container::ClosePairContainer)IMP::container::ClosePairContainer
add_pair_filters(const PairPredicates &objs) (defined in IMP::container::ClosePairContainer)IMP::container::ClosePairContainer
after_evaluate(DerivativeAccumulator *accpt)IMP::kernel::ScoreState
apply(const PairModifier *sm) const IMP::kernel::PairContainer
apply_generic(const PairModifier *m) const IMP::kernel::PairContainer
before_evaluate()IMP::kernel::ScoreState
clear_caches()IMP::base::Objectvirtual
clear_pair_filters() (defined in IMP::container::ClosePairContainer)IMP::container::ClosePairContainer
ClosePairContainer(SingletonContainerAdaptor c, double distance_cutoff, double slack=1, std::string name="ClosePairContainer%1%")IMP::container::ClosePairContainer
ClosePairContainer(SingletonContainerAdaptor c, double distance_cutoff, core::ClosePairsFinder *cpf, double slack=1, std::string name="ClosePairContainer%1%")IMP::container::ClosePairContainer
ContainedIndexType typedef (defined in IMP::kernel::PairContainer)IMP::kernel::PairContainer
ContainedIndexTypes typedef (defined in IMP::kernel::PairContainer)IMP::kernel::PairContainer
ContainedType typedef (defined in IMP::kernel::PairContainer)IMP::kernel::PairContainer
ContainedTypes typedef (defined in IMP::kernel::PairContainer)IMP::kernel::PairContainer
Container(kernel::Model *m, std::string name="Container %1%") (defined in IMP::kernel::Container)IMP::kernel::Containerprotected
do_after_evaluate(DerivativeAccumulator *accpt)IMP::kernel::Containervirtual
do_apply(const PairModifier *sm) const (defined in IMP::container::ClosePairContainer)IMP::container::ClosePairContainervirtual
do_before_evaluate() (defined in IMP::container::ClosePairContainer)IMP::container::ClosePairContainervirtual
do_destroy()IMP::base::Objectvirtual
do_get_inputs() const IMP::container::ClosePairContainervirtual
do_get_interactions() const IMP::kernel::ModelObjectprotectedvirtual
do_get_outputs() const IMP::kernel::Containervirtual
do_get_provides_access() const (defined in IMP::kernel::PairContainer)IMP::kernel::PairContainerprotectedvirtual
do_set_model(kernel::Model *)IMP::kernel::ModelObjectvirtual
get_all_possible_indexes() const IMP::container::ClosePairContainervirtual
get_all_possible_particles() const IMP::kernel::Container
get_check_level() const (defined in IMP::base::Object)IMP::base::Object
get_contains_particle_pair(ParticlePair v) const IMP::kernel::PairContainer
get_contents_version() const IMP::kernel::Container
get_has_dependencies() const IMP::kernel::ModelObject
get_has_pair_filters() (defined in IMP::container::ClosePairContainer)IMP::container::ClosePairContainer
get_has_required_score_states() const IMP::kernel::ModelObject
get_indexes() const IMP::container::ClosePairContainervirtual
get_input_containers() const IMP::kernel::ScoreState
get_input_particles() const IMP::kernel::ScoreState
get_inputs() const IMP::kernel::ModelObject
get_interactions() const IMP::kernel::ModelObject
get_is_changed() const IMP::kernel::Container
get_is_decomposable() const IMP::kernel::Containervirtual
get_is_part_of_model() const IMP::kernel::ModelObject
get_log_level() const (defined in IMP::base::Object)IMP::base::Object
get_model() const (defined in IMP::kernel::ModelObject)IMP::kernel::ModelObject
get_name() const (defined in IMP::base::Object)IMP::base::Object
get_number_of_pair_filters() const (defined in IMP::container::ClosePairContainer)IMP::container::ClosePairContainer
get_number_of_particle_pairs() const IMP::kernel::PairContainer
get_output_containers() const IMP::kernel::ScoreState
get_output_particles() const IMP::kernel::ScoreState
get_outputs() const IMP::kernel::ModelObject
get_pair_filter(unsigned int i) const (defined in IMP::container::ClosePairContainer)IMP::container::ClosePairContainer
get_pair_filters() const (defined in IMP::container::ClosePairContainer)IMP::container::ClosePairContainer
get_particle_pair(unsigned int i) const IMP::kernel::PairContainer
get_particle_pairs() const IMP::kernel::PairContainer
get_range_indexes() const IMP::container::ClosePairContainervirtual
get_required_score_states() const IMP::kernel::ModelObject
get_slack() const (defined in IMP::container::ClosePairContainer)IMP::container::ClosePairContainer
get_type_name() const (defined in IMP::container::ClosePairContainer)IMP::container::ClosePairContainervirtual
get_version_info() const IMP::container::ClosePairContainervirtual
handle_set_has_required_score_states(bool)IMP::kernel::ModelObjectprotectedvirtual
ModelObject(kernel::Model *m, std::string name) (defined in IMP::kernel::ModelObject)IMP::kernel::ModelObject
ModelObject(std::string name)IMP::kernel::ModelObject
NonCopyable() (defined in IMP::base::NonCopyable)IMP::base::NonCopyableprotected
Object(std::string name)IMP::base::Objectprotected
Object()IMP::base::Objectprotected
PairContainer(kernel::Model *m, std::string name="PairContainer %1%") (defined in IMP::kernel::PairContainer)IMP::kernel::PairContainerprotected
remove_pair_filter(PairPredicate *d) (defined in IMP::container::ClosePairContainer)IMP::container::ClosePairContainer
remove_pair_filters(const PairPredicates &d) (defined in IMP::container::ClosePairContainer)IMP::container::ClosePairContainer
reserve_pair_filters(unsigned int sz) (defined in IMP::container::ClosePairContainer)IMP::container::ClosePairContainer
ScoreState(kernel::Model *m, std::string name) (defined in IMP::kernel::ScoreState)IMP::kernel::ScoreState
ScoreState(kernel::Model *m)IMP::kernel::ScoreState
ScoreState(std::string name="ScoreState %1%")IMP::kernel::ScoreState
set_check_level(CheckLevel l)IMP::base::Object
set_has_dependencies(bool tf)IMP::kernel::ModelObject
set_has_required_score_states(bool tf)IMP::kernel::ModelObject
set_is_changed(bool tf)IMP::kernel::Containerprotected
set_log_level(LogLevel l)IMP::base::Object
set_model(kernel::Model *m)IMP::kernel::ModelObjectvirtual
set_name(std::string name) (defined in IMP::base::Object)IMP::base::Object
set_pair_filters(const PairPredicates &ps) (defined in IMP::container::ClosePairContainer)IMP::container::ClosePairContainer
set_pair_filters_order(const PairPredicates &objs) (defined in IMP::container::ClosePairContainer)IMP::container::ClosePairContainer
set_slack(double s) (defined in IMP::container::ClosePairContainer)IMP::container::ClosePairContainer
set_was_used(bool tf) const IMP::base::Object
show(std::ostream &out=std::cout) const (defined in IMP::base::Object)IMP::base::Object
~ModelObject() (defined in IMP::kernel::ModelObject)IMP::kernel::ModelObject