IMP
2.1.0
The Integrative Modeling Platform
IMP Mainpage
All IMP Modules
Related Pages
Modules
Namespaces
Classes
Files
Examples
Indexes
File List
File Members
DistanceRestraint.h
Go to the documentation of this file.
1
/**
2
* \file IMP/core/DistanceRestraint.h
3
* \brief Distance restraint between two particles.
4
*
5
* Copyright 2007-2013 IMP Inventors. All rights reserved.
6
*
7
*/
8
9
#ifndef IMPCORE_DISTANCE_RESTRAINT_H
10
#define IMPCORE_DISTANCE_RESTRAINT_H
11
12
#include <IMP/core/core_config.h>
13
#include "
DistancePairScore.h
"
14
#include "
XYZ.h
"
15
#include <
IMP/generic.h
>
16
17
#include <
IMP/kernel/Restraint.h
>
18
19
#include <iostream>
20
21
IMPCORE_BEGIN_NAMESPACE
22
23
//! Distance restraint between two particles
24
/**
25
\note If the particles are closer than a certain distance, then
26
the contributions to the derivatives are set to 0.
27
28
\see PairRestraint
29
\see DistancePairScore
30
\see SphereDistancePairScore
31
*/
32
class
IMPCOREEXPORT
DistanceRestraint
:
33
#if defined(SWIG) || defined(IMP_DOXYGEN)
34
public
kernel::Restraint
35
#else
36
public
IMP::internal::TupleRestraint<DistancePairScore>
37
#endif
38
{
39
public
:
40
//! Create the distance restraint.
41
/** \param[in] score_func Scoring function for the restraint.
42
\param[in] a Pointer to first particle in distance restraint.
43
\param[in] b Pointer to second particle in distance restraint.
44
*/
45
DistanceRestraint
(
UnaryFunction
*score_func,
kernel::Particle
*a,
46
kernel::Particle
*b);
47
48
#ifdef SWIG
49
protected
:
50
double
unprotected_evaluate(
IMP::DerivativeAccumulator
*accum)
const
;
51
IMP::kernel::ModelObjectsTemp
do_get_inputs
()
const
;
52
IMP_OBJECT_METHODS
(
DistanceRestraint
);
53
#endif
54
};
55
56
IMPCORE_END_NAMESPACE
57
58
#endif
/* IMPCORE_DISTANCE_RESTRAINT_H */
IMP::kernel::DerivativeAccumulator
Class for adding derivatives from restraints to the model.
Definition:
kernel/DerivativeAccumulator.h:25
IMP::kernel::UnaryFunction
Abstract single variable functor class for score functions.
Definition:
kernel/UnaryFunction.h:25
IMP::core::DistanceRestraint
Distance restraint between two particles.
Definition:
DistanceRestraint.h:32
IMP::base::Vector
Definition:
base/Vector.h:37
XYZ.h
Simple xyz decorator.
Restraint.h
Abstract base class for all restraints.
IMP::kernel::Restraint
A restraint is a term in an IMP ScoringFunction.
Definition:
kernel/declare_Restraint.h:52
IMP_OBJECT_METHODS
#define IMP_OBJECT_METHODS(Name)
Define the basic things needed by any Object.
Definition:
base/object_macros.h:25
IMP::kernel::Particle
Class to handle individual model particles.
Definition:
kernel/declare_Particle.h:34
DistancePairScore.h
A Score on the distance between a pair of particles.
IMP::kernel::ModelObject::do_get_inputs
virtual ModelObjectsTemp do_get_inputs() const =0
generic.h
Import IMP/kernel/generic.h in the namespace.