| add_particle(Particle *obj) (defined in IMP::multifit::RadiusOfGyrationRestraint) | IMP::multifit::RadiusOfGyrationRestraint | |
| add_particles(const Particles &objs) (defined in IMP::multifit::RadiusOfGyrationRestraint) | IMP::multifit::RadiusOfGyrationRestraint | |
| add_score_and_derivatives(ScoreAccumulator sa) const | IMP::kernel::Restraint | |
| clear_caches() | IMP::base::Object | virtual |
| clear_particles() (defined in IMP::multifit::RadiusOfGyrationRestraint) | IMP::multifit::RadiusOfGyrationRestraint | |
| create_current_decomposition() const | IMP::kernel::Restraint | |
| create_decomposition() const | IMP::kernel::Restraint | |
| create_scoring_function(double weight=1.0, double max=NO_MAX) const | IMP::kernel::Restraint | virtual |
| do_add_score_and_derivatives(ScoreAccumulator sa) const | IMP::kernel::Restraint | protectedvirtual |
| do_create_current_decomposition() const | IMP::kernel::Restraint | protectedvirtual |
| do_create_decomposition() const | IMP::kernel::Restraint | protectedvirtual |
| do_get_inputs() const =0 | IMP::kernel::ModelObject | protectedpure virtual |
| do_get_interactions() const | IMP::kernel::ModelObject | protectedvirtual |
| do_get_outputs() const | IMP::kernel::Restraint | protectedvirtual |
| do_show(std::ostream &out) const (defined in IMP::multifit::RadiusOfGyrationRestraint) | IMP::multifit::RadiusOfGyrationRestraint | virtual |
| do_update_dependencies() | IMP::kernel::Restraint | protectedvirtual |
| get_has_particles() (defined in IMP::multifit::RadiusOfGyrationRestraint) | IMP::multifit::RadiusOfGyrationRestraint | |
| get_input_containers() const | IMP::kernel::Restraint | |
| get_input_particles() const | IMP::kernel::Restraint | |
| get_inputs() const | IMP::kernel::ModelObject | |
| get_interactions() const | IMP::kernel::ModelObject | |
| get_last_score() const | IMP::kernel::Restraint | virtual |
| get_maximum_score() const (defined in IMP::kernel::Restraint) | IMP::kernel::Restraint | |
| get_model() const (defined in IMP::kernel::ModelObject) | IMP::kernel::ModelObject | |
| get_name() const (defined in IMP::base::Object) | IMP::base::Object | |
| get_number_of_particles() const (defined in IMP::multifit::RadiusOfGyrationRestraint) | IMP::multifit::RadiusOfGyrationRestraint | |
| get_outputs() const | IMP::kernel::ModelObject | |
| get_particle(unsigned int i) const (defined in IMP::multifit::RadiusOfGyrationRestraint) | IMP::multifit::RadiusOfGyrationRestraint | |
| get_particles() const (defined in IMP::multifit::RadiusOfGyrationRestraint) | IMP::multifit::RadiusOfGyrationRestraint | |
| get_radius_of_gyration() | IMP::multifit::RadiusOfGyrationRestraint | |
| get_score() const | IMP::kernel::Restraint | |
| get_version_info() const =0 | IMP::base::Object | pure virtual |
| get_was_good() const | IMP::kernel::Restraint | |
| get_weight() const (defined in IMP::kernel::Restraint) | IMP::kernel::Restraint | |
| hub_ (defined in IMP::multifit::RadiusOfGyrationRestraint) | IMP::multifit::RadiusOfGyrationRestraint | protected |
| mdl_ (defined in IMP::multifit::RadiusOfGyrationRestraint) | IMP::multifit::RadiusOfGyrationRestraint | protected |
| ModelObject(Model *m, std::string name) (defined in IMP::kernel::ModelObject) | IMP::kernel::ModelObject | |
| ModelObjectsTemp typedef | IMP::kernel::ModelObject | related |
| NonCopyable() (defined in IMP::base::NonCopyable) | IMP::base::NonCopyable | protected |
| Object(std::string name) | IMP::base::Object | protected |
| ObjectsTemp typedef | IMP::base::Object | related |
| predicted_rog_ (defined in IMP::multifit::RadiusOfGyrationRestraint) | IMP::multifit::RadiusOfGyrationRestraint | protected |
| RadiusOfGyrationRestraint(Particles ps, int num_residues, Float scale=1.) | IMP::multifit::RadiusOfGyrationRestraint | |
| remove_particle(Particle *d) (defined in IMP::multifit::RadiusOfGyrationRestraint) | IMP::multifit::RadiusOfGyrationRestraint | |
| remove_particles(const Particles &d) (defined in IMP::multifit::RadiusOfGyrationRestraint) | IMP::multifit::RadiusOfGyrationRestraint | |
| reserve_particles(unsigned int sz) (defined in IMP::multifit::RadiusOfGyrationRestraint) | IMP::multifit::RadiusOfGyrationRestraint | |
| Restraint(Model *m, std::string name) | IMP::kernel::Restraint | |
| RestraintsTemp typedef | IMP::kernel::Restraint | related |
| scale_ (defined in IMP::multifit::RadiusOfGyrationRestraint) | IMP::multifit::RadiusOfGyrationRestraint | protected |
| set_check_level(CheckLevel l) | IMP::base::Object | |
| set_log_level(LogLevel l) | IMP::base::Object | |
| set_maximum_score(double s) (defined in IMP::kernel::Restraint) | IMP::kernel::Restraint | |
| set_name(std::string name) (defined in IMP::base::Object) | IMP::base::Object | |
| set_particles(const Particles &ps) (defined in IMP::multifit::RadiusOfGyrationRestraint) | IMP::multifit::RadiusOfGyrationRestraint | |
| set_particles_order(const Particles &objs) (defined in IMP::multifit::RadiusOfGyrationRestraint) | IMP::multifit::RadiusOfGyrationRestraint | |
| set_radius_of_gyration(Float r) | IMP::multifit::RadiusOfGyrationRestraint | |
| set_was_used(bool tf) const | IMP::base::Object | |
| set_weight(Float weight) (defined in IMP::kernel::Restraint) | IMP::kernel::Restraint | |
| show(std::ostream &out=std::cout) const (defined in IMP::base::Object) | IMP::base::Object | |
| update_dependencies() | IMP::kernel::ModelObject | protectedvirtual |
