| bin_size_ (defined in IMP::multifit::RMSDClustering< TransT >) | IMP::multifit::RMSDClustering< TransT > | protected |
| build_full_graph(const Hash3 &h, const std::vector< TransformationRecord * > &recs, float max_dist, Graph &g) (defined in IMP::multifit::RMSDClustering< TransT >) | IMP::multifit::RMSDClustering< TransT > | protected |
| build_graph(const Hash3::PointList &inds, const std::vector< TransformationRecord * > &recs, float max_dist, Graph &g) (defined in IMP::multifit::RMSDClustering< TransT >) | IMP::multifit::RMSDClustering< TransT > | protected |
| centroid_ (defined in IMP::multifit::RMSDClustering< TransT >) | IMP::multifit::RMSDClustering< TransT > | protected |
| clean(std::vector< TransformationRecord * > *&records) | IMP::multifit::RMSDClustering< TransT > | protectedvirtual |
| ClusEdgeWeightProperty typedef (defined in IMP::multifit::RMSDClustering< TransT >) | IMP::multifit::RMSDClustering< TransT > | |
| cluster(float max_dist, const std::vector< TransT > &input_trans, std::vector< TransT > &output_trans) | IMP::multifit::RMSDClustering< TransT > | |
| cluster_graph(Graph &g, const std::vector< TransformationRecord * > &recs, float max_dist) (defined in IMP::multifit::RMSDClustering< TransT >) | IMP::multifit::RMSDClustering< TransT > | protected |
| ClusVertexIndexProperty typedef (defined in IMP::multifit::RMSDClustering< TransT >) | IMP::multifit::RMSDClustering< TransT > | |
| exhaustive_clustering(float max_dist, std::vector< TransformationRecord * > &recs) (defined in IMP::multifit::RMSDClustering< TransT >) | IMP::multifit::RMSDClustering< TransT > | protectedvirtual |
| fast_clustering(float max_dist, std::vector< TransformationRecord * > &recs) (defined in IMP::multifit::RMSDClustering< TransT >) | IMP::multifit::RMSDClustering< TransT > | protected |
| get_squared_distance(const TransT &trans1, const TransT &trans2) | IMP::multifit::RMSDClustering< TransT > | protectedvirtual |
| Graph typedef (defined in IMP::multifit::RMSDClustering< TransT >) | IMP::multifit::RMSDClustering< TransT > | |
| Hash3 typedef (defined in IMP::multifit::RMSDClustering< TransT >) | IMP::multifit::RMSDClustering< TransT > | |
| is_fast_ (defined in IMP::multifit::RMSDClustering< TransT >) | IMP::multifit::RMSDClustering< TransT > | protected |
| is_ready_ (defined in IMP::multifit::RMSDClustering< TransT >) | IMP::multifit::RMSDClustering< TransT > | protected |
| prepare(const ParticlesTemp &ps) | IMP::multifit::RMSDClustering< TransT > | |
| ps_ (defined in IMP::multifit::RMSDClustering< TransT >) | IMP::multifit::RMSDClustering< TransT > | protected |
| RCEdge typedef (defined in IMP::multifit::RMSDClustering< TransT >) | IMP::multifit::RMSDClustering< TransT > | |
| RCEdgeIt typedef (defined in IMP::multifit::RMSDClustering< TransT >) | IMP::multifit::RMSDClustering< TransT > | |
| RCGTraits typedef (defined in IMP::multifit::RMSDClustering< TransT >) | IMP::multifit::RMSDClustering< TransT > | |
| RCVertex typedef (defined in IMP::multifit::RMSDClustering< TransT >) | IMP::multifit::RMSDClustering< TransT > | |
| RCVertexIt typedef (defined in IMP::multifit::RMSDClustering< TransT >) | IMP::multifit::RMSDClustering< TransT > | |
| rmsd_calc_ (defined in IMP::multifit::RMSDClustering< TransT >) | IMP::multifit::RMSDClustering< TransT > | protected |
| RMSDClustering(float bin_size=3.) | IMP::multifit::RMSDClustering< TransT > | |
| set_bin_size(float bin_size) (defined in IMP::multifit::RMSDClustering< TransT >) | IMP::multifit::RMSDClustering< TransT > | |
| xyzs_ (defined in IMP::multifit::RMSDClustering< TransT >) | IMP::multifit::RMSDClustering< TransT > | protected |
| ~RMSDClustering() (defined in IMP::multifit::RMSDClustering< TransT >) | IMP::multifit::RMSDClustering< TransT > | virtual |