add_pair_filter(PairPredicate *obj) (defined in IMP::core::ExcludedVolumeRestraint) | IMP::core::ExcludedVolumeRestraint | |
add_pair_filters(const PairPredicates &objs) (defined in IMP::core::ExcludedVolumeRestraint) | IMP::core::ExcludedVolumeRestraint | |
add_score_and_derivatives(ScoreAccumulator sa) const | IMP::kernel::Restraint | |
clear_caches() | IMP::core::ExcludedVolumeRestraint | virtual |
clear_pair_filters() (defined in IMP::core::ExcludedVolumeRestraint) | IMP::core::ExcludedVolumeRestraint | |
create_current_decomposition() const | IMP::kernel::Restraint | |
create_decomposition() const | IMP::kernel::Restraint | |
create_scoring_function(double weight=1.0, double max=NO_MAX) const | IMP::kernel::Restraint | virtual |
do_add_score_and_derivatives(ScoreAccumulator sa) const | IMP::kernel::Restraint | protectedvirtual |
do_create_current_decomposition() const | IMP::core::ExcludedVolumeRestraint | virtual |
do_create_decomposition() const | IMP::core::ExcludedVolumeRestraint | virtual |
do_get_inputs() const | IMP::core::ExcludedVolumeRestraint | virtual |
do_get_interactions() const | IMP::kernel::ModelObject | protectedvirtual |
do_get_outputs() const | IMP::kernel::Restraint | protectedvirtual |
do_update_dependencies() | IMP::kernel::Restraint | protectedvirtual |
ExcludedVolumeRestraint(SingletonContainerAdaptor sc, double k=1, double slack=10, std::string name="ExcludedVolumeRestraint%1%") | IMP::core::ExcludedVolumeRestraint | |
get_has_pair_filters() (defined in IMP::core::ExcludedVolumeRestraint) | IMP::core::ExcludedVolumeRestraint | |
get_input_containers() const | IMP::kernel::Restraint | |
get_input_particles() const | IMP::kernel::Restraint | |
get_inputs() const | IMP::kernel::ModelObject | |
get_interactions() const | IMP::kernel::ModelObject | |
get_last_score() const | IMP::kernel::Restraint | virtual |
get_maximum_score() const (defined in IMP::kernel::Restraint) | IMP::kernel::Restraint | |
get_model() const (defined in IMP::kernel::ModelObject) | IMP::kernel::ModelObject | |
get_name() const (defined in IMP::base::Object) | IMP::base::Object | |
get_number_of_pair_filters() const (defined in IMP::core::ExcludedVolumeRestraint) | IMP::core::ExcludedVolumeRestraint | |
get_outputs() const | IMP::kernel::ModelObject | |
get_pair_filter(unsigned int i) const (defined in IMP::core::ExcludedVolumeRestraint) | IMP::core::ExcludedVolumeRestraint | |
get_pair_filters() const (defined in IMP::core::ExcludedVolumeRestraint) | IMP::core::ExcludedVolumeRestraint | |
get_score() const | IMP::kernel::Restraint | |
get_version_info() const =0 | IMP::base::Object | pure virtual |
get_was_good() const | IMP::kernel::Restraint | |
get_weight() const (defined in IMP::kernel::Restraint) | IMP::kernel::Restraint | |
ModelObject(Model *m, std::string name) (defined in IMP::kernel::ModelObject) | IMP::kernel::ModelObject | |
ModelObjectsTemp typedef | IMP::kernel::ModelObject | related |
NonCopyable() (defined in IMP::base::NonCopyable) | IMP::base::NonCopyable | protected |
Object(std::string name) | IMP::base::Object | protected |
ObjectsTemp typedef | IMP::base::Object | related |
remove_pair_filter(PairPredicate *d) (defined in IMP::core::ExcludedVolumeRestraint) | IMP::core::ExcludedVolumeRestraint | |
remove_pair_filters(const PairPredicates &d) (defined in IMP::core::ExcludedVolumeRestraint) | IMP::core::ExcludedVolumeRestraint | |
reserve_pair_filters(unsigned int sz) (defined in IMP::core::ExcludedVolumeRestraint) | IMP::core::ExcludedVolumeRestraint | |
Restraint(Model *m, std::string name) | IMP::kernel::Restraint | |
RestraintsTemp typedef | IMP::kernel::Restraint | related |
set_check_level(CheckLevel l) | IMP::base::Object | |
set_log_level(LogLevel l) | IMP::base::Object | |
set_maximum_score(double s) (defined in IMP::kernel::Restraint) | IMP::kernel::Restraint | |
set_name(std::string name) (defined in IMP::base::Object) | IMP::base::Object | |
set_pair_filters(const PairPredicates &ps) (defined in IMP::core::ExcludedVolumeRestraint) | IMP::core::ExcludedVolumeRestraint | |
set_pair_filters_order(const PairPredicates &objs) (defined in IMP::core::ExcludedVolumeRestraint) | IMP::core::ExcludedVolumeRestraint | |
set_was_used(bool tf) const | IMP::base::Object | |
set_weight(Float weight) (defined in IMP::kernel::Restraint) | IMP::kernel::Restraint | |
show(std::ostream &out=std::cout) const (defined in IMP::base::Object) | IMP::base::Object | |
unprotected_evaluate(IMP::DerivativeAccumulator *accum) const (defined in IMP::core::ExcludedVolumeRestraint) | IMP::core::ExcludedVolumeRestraint | |
update_dependencies() | IMP::kernel::ModelObject | protectedvirtual |