IMP  2.0.1
The Integrative Modeling Platform
IMP::atom::ForceFieldParameters Member List

This is the complete list of members for IMP::atom::ForceFieldParameters, including all inherited members.

add_bonds(Hierarchy mhd) const IMP::atom::ForceFieldParameters
add_bonds(Residue rd) const (defined in IMP::atom::ForceFieldParameters)IMP::atom::ForceFieldParametersprotected
add_bonds(Residue rd1, Residue rd2) const (defined in IMP::atom::ForceFieldParameters)IMP::atom::ForceFieldParametersprotected
add_bonds(Hierarchy d, const ForceFieldParameters *ffp=get_all_atom_CHARMM_parameters())IMP::atom::ForceFieldParametersrelated
add_radii(Hierarchy mhd, double scale=1.0, FloatKey radius_key=FloatKey("radius")) const IMP::atom::ForceFieldParameters
add_radii(Hierarchy d, const ForceFieldParameters *ffp=get_all_atom_CHARMM_parameters(), FloatKey radius_key=FloatKey("radius"))IMP::atom::ForceFieldParametersrelated
add_well_depths(Hierarchy mhd) const IMP::atom::ForceFieldParameters
atom_res_type_2_force_field_atom_type_ (defined in IMP::atom::ForceFieldParameters)IMP::atom::ForceFieldParametersprotected
AtomTypeMap typedef (defined in IMP::atom::ForceFieldParameters)IMP::atom::ForceFieldParametersprotected
ChargePair typedef (defined in IMP::atom::ForceFieldParameters)IMP::atom::ForceFieldParametersprotected
clear_caches()IMP::base::Objectvirtual
force_field_2_vdW_ (defined in IMP::atom::ForceFieldParameters)IMP::atom::ForceFieldParametersprotected
ForceFieldParameters() (defined in IMP::atom::ForceFieldParameters)IMP::atom::ForceFieldParameters
get_epsilon(Atom atom) const IMP::atom::ForceFieldParameters
get_epsilon(const String &force_field_atom_type) const (defined in IMP::atom::ForceFieldParameters)IMP::atom::ForceFieldParametersprotected
get_force_field_atom_type(Atom atom) const (defined in IMP::atom::ForceFieldParameters)IMP::atom::ForceFieldParametersprotectedvirtual
get_name() const (defined in IMP::base::Object)IMP::base::Object
get_radius(Atom atom) const IMP::atom::ForceFieldParameters
get_radius(const String &force_field_atom_type) const (defined in IMP::atom::ForceFieldParameters)IMP::atom::ForceFieldParametersprotected
get_version_info() const =0IMP::base::Objectpure virtual
NonCopyable() (defined in IMP::base::NonCopyable)IMP::base::NonCopyableprotected
Object(std::string name)IMP::base::Objectprotected
ObjectsTemp typedefIMP::base::Objectrelated
residue_bonds_ (defined in IMP::atom::ForceFieldParameters)IMP::atom::ForceFieldParametersprotected
set_check_level(CheckLevel l)IMP::base::Object
set_log_level(LogLevel l)IMP::base::Object
set_name(std::string name) (defined in IMP::base::Object)IMP::base::Object
set_was_used(bool tf) const IMP::base::Object
show(std::ostream &out=std::cout) const (defined in IMP::base::Object)IMP::base::Object