Detailed Description

Store data to be clustered for embedding based algorithms.

Point-based clustering needs a way of embedding the data being clustered in space. Classes which implement Embedding provide a mapping between each item being clustered (named by an integer index) and a point in space, as a fixed-length array of floating point numbers.

Definition at line 25 of file statistics/embedding.h.

Public Member Functions
virtual unsigned int	get_number_of_items () const =0

virtual algebra::VectorKD	get_point (unsigned int i) const =0

virtual algebra::VectorKDs	get_points () const

double	get_weight (unsigned int i) const
	Return a weight for the point. More...

Public Member Functions inherited from IMP::base::Object
virtual void	clear_caches ()

CheckLevel	get_check_level () const

LogLevel	get_log_level () const

virtual VersionInfo	get_version_info () const
	Get information about the module and version of the object. More...

void	set_check_level (CheckLevel l)

void	set_log_level (LogLevel l)
	Set the logging level used in this object. More...

void	set_was_used (bool tf) const

void	show (std::ostream &out=std::cout) const

const std::string &	get_name () const

void	set_name (std::string name)

virtual std::string	get_type_name () const

Protected Member Functions
	Embedding (std::string name)

virtual double	do_get_weight (unsigned int i) const
	By default return 1.0. More...

Protected Member Functions inherited from IMP::base::Object
	Object (std::string name)
	Construct an object with the given name. More...

virtual void	do_destroy ()

Member Function Documentation

virtual double IMP::statistics::Embedding::do_get_weight ( unsigned int i ) const

protectedvirtual

By default return 1.0.

Definition at line 29 of file statistics/embedding.h.

double IMP::statistics::Embedding::get_weight ( unsigned int i ) const

Return a weight for the point.

Definition at line 38 of file statistics/embedding.h.

The documentation for this class was generated from the following file:

statistics/embedding.h

Detailed Description

Public Member Functions

Protected Member Functions

Member Function Documentation