IMP
2.4.0
The Integrative Modeling Platform
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#include <IMP/kinematics/KinematicForestScoreState.h>
A score state that uses a KinematicForest of the model to update external coordinates before energy evaluation, if internal coordinates in the forest where altered previously.
Definition at line 41 of file KinematicForestScoreState.h.
Public Member Functions | |
KinematicForestScoreState (KinematicForest *kf, IMP::core::RigidBodies rbs, IMP::kernel::ParticlesTemp atoms) | |
void | do_after_evaluate (DerivativeAccumulator *da) |
void | do_before_evaluate () |
kernel::ModelObjectsTemp | do_get_inputs () const |
kernel::ModelObjectsTemp | do_get_outputs () const |
virtual std::string | get_type_name () const |
virtual ::IMP::base::VersionInfo | get_version_info () const |
Get information about the module and version of the object. More... | |
Public Member Functions inherited from IMP::kernel::ScoreState | |
ScoreState (kernel::Model *m, std::string name) | |
void | after_evaluate (DerivativeAccumulator *accpt) |
Do post evaluation work if needed. More... | |
void | before_evaluate () |
Force update of the structure. More... | |
Public Member Functions inherited from IMP::kernel::ModelObject | |
ModelObject (kernel::Model *m, std::string name) | |
bool | get_has_dependencies () const |
Return whether this object has dependencies computed. More... | |
bool | get_has_required_score_states () const |
Return whether score states are computed. More... | |
ModelObjectsTemp | get_inputs () const |
ModelObjectsTemps | get_interactions () const |
Get the interacting sets induced by this ModelObject. More... | |
Model * | get_model () const |
ModelObjectsTemp | get_outputs () const |
const ScoreStatesTemp & | get_required_score_states () const |
Get the score states that are ancestors of this in the dependency graph. More... | |
void | set_has_dependencies (bool tf) |
Either invalidate the dependencies or ensure they are correct. More... | |
void | set_has_required_score_states (bool tf) |
Compute the required score states. More... | |
Public Member Functions inherited from IMP::base::Object | |
virtual void | clear_caches () |
CheckLevel | get_check_level () const |
LogLevel | get_log_level () const |
void | set_check_level (CheckLevel l) |
void | set_log_level (LogLevel l) |
Set the logging level used in this object. More... | |
void | set_was_used (bool tf) const |
void | show (std::ostream &out=std::cout) const |
const std::string & | get_name () const |
void | set_name (std::string name) |
Additional Inherited Members | |
Protected Member Functions inherited from IMP::kernel::ModelObject | |
virtual ModelObjectsTemps | do_get_interactions () const |
virtual void | handle_set_has_required_score_states (bool) |
Protected Member Functions inherited from IMP::base::Object | |
Object (std::string name) | |
Construct an object with the given name. More... | |
virtual void | do_destroy () |
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Get any Particle, Container or other ModelObjects read by this during evaluation. If you read everything in a container, you can just return that container.
Implements IMP::kernel::ModelObject.
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Get any Particle, Container or other ModelObjects changed by this during evaluation. This is only useful for ScoreStates, at the moment.
Implements IMP::kernel::ModelObject.
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Get information about the module and version of the object.
Reimplemented from IMP::base::Object.
Definition at line 43 of file KinematicForestScoreState.h.