Package: imp-dev Architecture: amd64 Version: 20240508.develop.78018a392b-1 Priority: optional Section: libdevel Source: imp Maintainer: Ben Webb Installed-Size: 6980 Depends: imp (= 20240508.develop.78018a392b-1), cmake, swig, libboost-filesystem-dev, libboost-graph-dev, libboost-iostreams-dev, libboost-program-options-dev, libboost-random-dev, libboost-regex-dev, libboost-thread-dev, libcgal-dev, libhdf5-dev, libfftw3-dev, libopencv-dev, libgsl0-dev, python3-dev, libann-dev, libeigen3-dev, libcereal-dev, libprotobuf-dev Filename: noble/imp-dev_20240508.develop.78018a392b-1_amd64.deb Size: 940480 MD5sum: e5c5885eee2ff8f73caa79b897ac4c5c SHA1: 9c112a002984f49a8746cc7942ea66e436480580 SHA256: b1e723530ee59546012a0bff38145175595bfecc325c4ffda00a88c4029a6764 SHA512: e48cb3f74b96acc52d2b36eb15ec03a24c1c7a9ff7ce99e73bb7822e2b1281403dddc5203a4ba3f09e81d7fce4ef5581fc25a6499474fc93452430f915ea6097 Homepage: https://integrativemodeling.org/ Description: The Integrative Modeling Platform Headers to compile against IMP. Package: imp-openmpi Architecture: amd64 Version: 20240508.develop.78018a392b-1 Priority: optional Section: libs Source: imp Maintainer: Ben Webb Installed-Size: 11984 Depends: imp (= 20240508.develop.78018a392b-1), libboost-filesystem1.83.0 (>= 1.83.0), libboost-program-options1.83.0 (>= 1.83.0), libc6 (>= 2.38), libgcc-s1 (>= 3.0), libgomp1 (>= 4.2.1), libopencv-core406t64 (>= 4.6.0+dfsg), libopencv-imgcodecs406t64 (>= 4.6.0+dfsg), libopenmpi3t64 (>= 4.1.6), libstdc++6 (>= 13.1), python3-mpi4py Filename: noble/imp-openmpi_20240508.develop.78018a392b-1_amd64.deb Size: 1595140 MD5sum: e3ecb80037bd9ae011851fa0d0f18ac3 SHA1: a6695034b7470b39b8cd868d8e686e5b6e3fffb0 SHA256: 58970090e9ff5e5f33dceed73ebbac2f1c66720505e9ce1836bdecb83c704a41 SHA512: a987f7bde7042eb231f2407e8d9698b238bbbcaa0e65483ba5d9bb8ee85407a1e3385baabd65df1ac6c941650aae5c91cd1e13149ee125ccaa90831659a4ecc8 Homepage: https://integrativemodeling.org/ Description: The Integrative Modeling Platform IMP MPI module and dependents, for openmpi. Package: imp Architecture: amd64 Version: 20240508.develop.78018a392b-1 Priority: optional Section: libs Maintainer: Ben Webb Installed-Size: 795754 Depends: libboost-filesystem1.83.0 (>= 1.83.0), libboost-graph1.83.0 (>= 1.83.0), libboost-iostreams1.83.0 (>= 1.83.0), libboost-program-options1.83.0 (>= 1.83.0), libboost-random1.83.0 (>= 1.83.0), libc6 (>= 2.38), libfftw3-double3 (>= 3.3.10), libgcc-s1 (>= 4.0), libgmp10 (>= 2:6.3.0+dfsg), libgomp1 (>= 4.9), libgsl27 (>= 2.7.1), libhdf5-103-1t64, libmpfr6 (>= 3.1.3), libopencv-core406t64 (>= 4.6.0+dfsg), libopencv-imgcodecs406t64 (>= 4.6.0+dfsg), libopencv-imgproc406t64 (>= 4.6.0+dfsg), libprotobuf32t64 (>= 3.21.12), libstdc++6 (>= 13.1), python3-numpy, python3-protobuf, python3-yaml Breaks: imp-python3 (<< 2.13.0) Replaces: imp-python3 (<< 2.13.0) Filename: noble/imp_20240508.develop.78018a392b-1_amd64.deb Size: 64812670 MD5sum: e751abe828c375e61e70d31e75c00c76 SHA1: 7462bd6b45b2393a8e55ec1e0db727780dc58b74 SHA256: 0aa0723617ae9a8d001a4425111a08ebb61c311a09b32a085864cb6889931cd0 SHA512: 7a72306bc92a8a26fb1f53c6d06320af9281f45cd55af4a2a2165ca82489ef296e3ce9c18a408aca4678cd0f39eb2f0d8c0d35f99fd49148a8bb21483109680c Homepage: https://integrativemodeling.org/ Description: The Integrative Modeling Platform IMP's broad goal is to contribute to a comprehensive structural characterization of biomolecules ranging in size and complexity from small peptides to large macromolecular assemblies. Detailed structural characterization of assemblies is generally impossible by any single existing experimental or computational method. This barrier can be overcome by hybrid approaches that integrate data from diverse biochemical and biophysical experiments (eg, x-ray crystallography, NMR spectroscopy, electron microscopy, immuno-electron microscopy, footprinting, chemical cross-linking, FRET spectroscopy, small angle X-ray scattering, immunoprecipitation, genetic interactions, etc...). . We formulate the hybrid approach to structure determination as an optimization problem, the solution of which requires three main components: * the representation of the assembly, * the scoring function and * the optimization method. . The ensemble of solutions to the optimization problem embodies the most accurate structural characterization given the available information. . We created IMP, the Integrative Modeling Platform, to make it easier to implement such an integrative approach to structural and dynamics problems. IMP is designed to allow mixing and matching of existing modeling components as well as easy addition of new functionality.