Package: imp-dev Architecture: amd64 Version: 20240726.develop.5651aa123e-1 Priority: optional Section: libdevel Source: imp Maintainer: Ben Webb Installed-Size: 6975 Depends: imp (= 20240726.develop.5651aa123e-1), cmake, swig, libboost-filesystem-dev, libboost-graph-dev, libboost-iostreams-dev, libboost-program-options-dev, libboost-random-dev, libboost-regex-dev, libboost-thread-dev, libcgal-dev, libhdf5-dev, libfftw3-dev, libopencv-dev, libgsl-dev, python3-dev, libann-dev, libeigen3-dev, libcereal-dev, libprotobuf-dev Filename: jammy/imp-dev_20240726.develop.5651aa123e-1_amd64.deb Size: 935816 MD5sum: 13a3525b5bce7395896434724b0c66ef SHA1: f9db76888eb84e6102e5ea79fca67b4b44991dd1 SHA256: 552c62e3dfe6104089a597c009f6606171302412e856d2c7aa856a6dc530ca19 SHA512: ca3b59c4a126ddf7cf8b07288b8b568477f383e2223b3578f7534c4ac0630d1d018d65d4c4948528fede07da7dc1d801252e76d0a04612cc4c731cb23a7b4571 Homepage: https://integrativemodeling.org/ Description: The Integrative Modeling Platform Headers to compile against IMP. Package: imp-openmpi Architecture: amd64 Version: 20240726.develop.5651aa123e-1 Priority: optional Section: libs Source: imp Maintainer: Ben Webb Installed-Size: 12170 Depends: imp (= 20240726.develop.5651aa123e-1), libboost-filesystem1.74.0 (>= 1.74.0), libboost-program-options1.74.0 (>= 1.74.0), libc6 (>= 2.34), libgcc-s1 (>= 3.0), libgomp1 (>= 4.2.1), libopencv-core4.5d (>= 4.5.4+dfsg), libopencv-imgcodecs4.5d (>= 4.5.4+dfsg), libopenmpi3 (>= 4.1.2), libstdc++6 (>= 11), python3-mpi4py Filename: jammy/imp-openmpi_20240726.develop.5651aa123e-1_amd64.deb Size: 1620328 MD5sum: adaec44fa57db3c64a99a85c127ea831 SHA1: 6a218f661ccb9d3a60bde62e04715909d35f5762 SHA256: 0bedd3ba94e89aa0871a3027a5ff135f71dd5c0e15bd3086729a27d41dd5359c SHA512: 5212b57b6d6894b93796f268921c4412f264f0ed558e16425669f0e7640142ad7f567a66e4d10767c4d3f165b1afbe51471662a193595fbe32132c71019021f8 Homepage: https://integrativemodeling.org/ Description: The Integrative Modeling Platform IMP MPI module and dependents, for openmpi. Package: imp Architecture: amd64 Version: 20240726.develop.5651aa123e-1 Priority: optional Section: libs Maintainer: Ben Webb Installed-Size: 799978 Depends: libboost-filesystem1.74.0 (>= 1.74.0), libboost-graph1.74.0 (>= 1.74.0), libboost-iostreams1.74.0 (>= 1.74.0), libboost-program-options1.74.0 (>= 1.74.0), libboost-random1.74.0 (>= 1.74.0), libc6 (>= 2.34), libfftw3-double3 (>= 3.3.5), libgcc-s1 (>= 4.0), libgmp10 (>= 2:6.2.1+dfsg), libgomp1 (>= 4.9), libgsl27 (>= 2.7.1), libhdf5-103-1, libmpfr6 (>= 3.1.3), libopencv-core4.5d (>= 4.5.4+dfsg), libopencv-imgcodecs4.5d (>= 4.5.4+dfsg), libopencv-imgproc4.5d (>= 4.5.4+dfsg), libprotobuf23 (>= 3.12.4), libstdc++6 (>= 11), python3-numpy, python3-protobuf, python3-yaml Breaks: imp-python3 (<< 2.13.0) Replaces: imp-python3 (<< 2.13.0) Filename: jammy/imp_20240726.develop.5651aa123e-1_amd64.deb Size: 65261000 MD5sum: 55b930d639c3687f6076816b97f9761f SHA1: 3bc430aea26cdaf7c5f7377b2dad4b222a084b01 SHA256: bde4afc6ef3e84b5bc86782d6789b60abe6237f2c0ea5cede7115640d1de420e SHA512: 27bda03c9930f051d2ed4bd49d5d7d6f09f19c786807531afc9267de9867e0231521fea2d82c506bcc69138e074ab0d7efd9291d5b7a6030a4374cd3e116fe76 Homepage: https://integrativemodeling.org/ Description: The Integrative Modeling Platform IMP's broad goal is to contribute to a comprehensive structural characterization of biomolecules ranging in size and complexity from small peptides to large macromolecular assemblies. Detailed structural characterization of assemblies is generally impossible by any single existing experimental or computational method. This barrier can be overcome by hybrid approaches that integrate data from diverse biochemical and biophysical experiments (eg, x-ray crystallography, NMR spectroscopy, electron microscopy, immuno-electron microscopy, footprinting, chemical cross-linking, FRET spectroscopy, small angle X-ray scattering, immunoprecipitation, genetic interactions, etc...). . We formulate the hybrid approach to structure determination as an optimization problem, the solution of which requires three main components: * the representation of the assembly, * the scoring function and * the optimization method. . The ensemble of solutions to the optimization problem embodies the most accurate structural characterization given the available information. . We created IMP, the Integrative Modeling Platform, to make it easier to implement such an integrative approach to structural and dynamics problems. IMP is designed to allow mixing and matching of existing modeling components as well as easy addition of new functionality.