Package: imp-dev Architecture: amd64 Version: 20250320.develop.13d6ec871c-1 Priority: optional Section: libdevel Source: imp Maintainer: Ben Webb Installed-Size: 8180 Depends: imp (= 20250320.develop.13d6ec871c-1), cmake, swig, libboost-filesystem-dev, libboost-graph-dev, libboost-iostreams-dev, libboost-program-options-dev, libboost-random-dev, libboost-regex-dev, libboost-thread-dev, libcgal-dev, libhdf5-dev, libfftw3-dev, libopencv-dev, libgsl-dev, python3-dev, libann-dev, libeigen3-dev, libcereal-dev, libprotobuf-dev Filename: jammy/imp-dev_20250320.develop.13d6ec871c-1_amd64.deb Size: 1092590 MD5sum: 8a238e8e829dcae59bfa2b7447ac87ed SHA1: 7239542490b4fdddd8c910c447c705eaa08ae774 SHA256: c548495fb99644a909de4c434633dc7e1aa51b8bb2113db8ceccabb0fbc45460 SHA512: a08f03973becc8889285993bcf06e57a42efaa2db9aaa8c730b53b53cfab8137896d928b804221669094363157ed1211c13e1fb85a4510373848ab110b5bf960 Homepage: https://integrativemodeling.org/ Description: The Integrative Modeling Platform Headers to compile against IMP. Package: imp-openmpi Architecture: amd64 Version: 20250320.develop.13d6ec871c-1 Priority: optional Section: libs Source: imp Maintainer: Ben Webb Installed-Size: 12332 Depends: imp (= 20250320.develop.13d6ec871c-1), libboost-filesystem1.74.0 (>= 1.74.0), libboost-program-options1.74.0 (>= 1.74.0), libc6 (>= 2.34), libgcc-s1 (>= 3.0), libgomp1 (>= 4.2.1), libopencv-core4.5d (>= 4.5.4+dfsg), libopencv-imgcodecs4.5d (>= 4.5.4+dfsg), libopenmpi3 (>= 4.1.2), libstdc++6 (>= 11), python3-mpi4py Filename: jammy/imp-openmpi_20250320.develop.13d6ec871c-1_amd64.deb Size: 1636866 MD5sum: 96d8c159862e6cbd83969d1ab7d2ca80 SHA1: 23905ca80707f60c2e4e8ebd9ed5a2d3645fa956 SHA256: 940c53d9831ca4282d26775d4845c33c974540f5d2082f45e513a39b700da523 SHA512: 765a8d14af1e76175751aed451715845f49699994f4226551ff3940400447a79e6021e49c9dbf85cb222bda883a80c5df903ed65d60e7d17d9c31c7d9ca5f84c Homepage: https://integrativemodeling.org/ Description: The Integrative Modeling Platform IMP MPI module and dependents, for openmpi. Package: imp Architecture: amd64 Version: 20250320.develop.13d6ec871c-1 Priority: optional Section: libs Maintainer: Ben Webb Installed-Size: 831020 Depends: libboost-filesystem1.74.0 (>= 1.74.0), libboost-graph1.74.0 (>= 1.74.0), libboost-iostreams1.74.0 (>= 1.74.0), libboost-program-options1.74.0 (>= 1.74.0), libboost-random1.74.0 (>= 1.74.0), libc6 (>= 2.34), libfftw3-double3 (>= 3.3.5), libgcc-s1 (>= 4.0), libgmp10 (>= 2:6.2.1+dfsg), libgomp1 (>= 4.9), libgsl27 (>= 2.7.1), libhdf5-103-1, libmpfr6 (>= 3.1.3), libopencv-core4.5d (>= 4.5.4+dfsg), libopencv-imgcodecs4.5d (>= 4.5.4+dfsg), libopencv-imgproc4.5d (>= 4.5.4+dfsg), libprotobuf23 (>= 3.12.4), libstdc++6 (>= 11), python3-numpy, python3-protobuf, python3-yaml Breaks: imp-python3 (<< 2.13.0) Replaces: imp-python3 (<< 2.13.0) Filename: jammy/imp_20250320.develop.13d6ec871c-1_amd64.deb Size: 85472018 MD5sum: 9a1e4b4d1886e1d8e010cf68240278e4 SHA1: 6ab32841696645229635a0dfb899c1a8e76ee1bd SHA256: d7eb41cea30f88f491a5dc9d1a670254c9b18de94d16f01bee841361a5d345a9 SHA512: cfc0031af009060da988b67b8d0f2d7c8a940d6d4256ea7e5cfa90064a5f4e7880f1c7c7715bac53f5e20c80a2398345ed9f1a1264059b412852a505693d43c0 Homepage: https://integrativemodeling.org/ Description: The Integrative Modeling Platform IMP's broad goal is to contribute to a comprehensive structural characterization of biomolecules ranging in size and complexity from small peptides to large macromolecular assemblies. Detailed structural characterization of assemblies is generally impossible by any single existing experimental or computational method. This barrier can be overcome by hybrid approaches that integrate data from diverse biochemical and biophysical experiments (eg, x-ray crystallography, NMR spectroscopy, electron microscopy, immuno-electron microscopy, footprinting, chemical cross-linking, FRET spectroscopy, small angle X-ray scattering, immunoprecipitation, genetic interactions, etc...). . We formulate the hybrid approach to structure determination as an optimization problem, the solution of which requires three main components: * the representation of the assembly, * the scoring function and * the optimization method. . The ensemble of solutions to the optimization problem embodies the most accurate structural characterization given the available information. . We created IMP, the Integrative Modeling Platform, to make it easier to implement such an integrative approach to structural and dynamics problems. IMP is designed to allow mixing and matching of existing modeling components as well as easy addition of new functionality.