Package: imp-dev Architecture: amd64 Version: 20241122.develop.d97d4ead1f-1 Priority: optional Section: libdevel Source: imp Maintainer: Ben Webb Installed-Size: 8112 Depends: imp (= 20241122.develop.d97d4ead1f-1), cmake, swig, libboost-filesystem-dev, libboost-graph-dev, libboost-iostreams-dev, libboost-program-options-dev, libboost-random-dev, libboost-regex-dev, libboost-thread-dev, libcgal-dev, libhdf5-dev, libfftw3-dev, libopencv-dev, libgsl-dev, python3-dev, libann-dev, libeigen3-dev, libcereal-dev, libprotobuf-dev Filename: jammy/imp-dev_20241122.develop.d97d4ead1f-1_amd64.deb Size: 1088602 MD5sum: 0bbaa7bddef1ff5578818a22480ddc34 SHA1: e3a15a35756bacd219457457f67ec51724bf6d6d SHA256: 07eb01dfe4f75b7d795f2df65d6bfff4f1b339bc88e3e98dc0af7b0c0011fed8 SHA512: b0a78d6cc8d5ab5493afcdb7127725c8b433fecf3762a7b0dd4dfaf7aba8f763c00a12c35e136efaede050fe35c2d8fac6c2d546e366282e9f934fca46f2237b Homepage: https://integrativemodeling.org/ Description: The Integrative Modeling Platform Headers to compile against IMP. Package: imp-openmpi Architecture: amd64 Version: 20241122.develop.d97d4ead1f-1 Priority: optional Section: libs Source: imp Maintainer: Ben Webb Installed-Size: 12170 Depends: imp (= 20241122.develop.d97d4ead1f-1), libboost-filesystem1.74.0 (>= 1.74.0), libboost-program-options1.74.0 (>= 1.74.0), libc6 (>= 2.34), libgcc-s1 (>= 3.0), libgomp1 (>= 4.2.1), libopencv-core4.5d (>= 4.5.4+dfsg), libopencv-imgcodecs4.5d (>= 4.5.4+dfsg), libopenmpi3 (>= 4.1.2), libstdc++6 (>= 11), python3-mpi4py Filename: jammy/imp-openmpi_20241122.develop.d97d4ead1f-1_amd64.deb Size: 1618574 MD5sum: 7dfdfb2be8a3fb11191f54199bbbb220 SHA1: 3318f29e9bf8a24e7a2dc58cc7e1a97924e64908 SHA256: 78734934f0b20d286e435bdf7f1e4fb09c52e39b33b718c5dc979dec652d05b5 SHA512: 190aaaa63ae14772fadbfa2d1c08a01bb7e4732cdacd2a556660c114dca7e17f131743bb8c7d77bcdece7bf66834f80ed28b2f29a4499fb0855d1be082e4f9a5 Homepage: https://integrativemodeling.org/ Description: The Integrative Modeling Platform IMP MPI module and dependents, for openmpi. Package: imp Architecture: amd64 Version: 20241122.develop.d97d4ead1f-1 Priority: optional Section: libs Maintainer: Ben Webb Installed-Size: 828292 Depends: libboost-filesystem1.74.0 (>= 1.74.0), libboost-graph1.74.0 (>= 1.74.0), libboost-iostreams1.74.0 (>= 1.74.0), libboost-program-options1.74.0 (>= 1.74.0), libboost-random1.74.0 (>= 1.74.0), libc6 (>= 2.34), libfftw3-double3 (>= 3.3.5), libgcc-s1 (>= 4.0), libgmp10 (>= 2:6.2.1+dfsg), libgomp1 (>= 4.9), libgsl27 (>= 2.7.1), libhdf5-103-1, libmpfr6 (>= 3.1.3), libopencv-core4.5d (>= 4.5.4+dfsg), libopencv-imgcodecs4.5d (>= 4.5.4+dfsg), libopencv-imgproc4.5d (>= 4.5.4+dfsg), libprotobuf23 (>= 3.12.4), libstdc++6 (>= 11), python3-numpy, python3-protobuf, python3-yaml Breaks: imp-python3 (<< 2.13.0) Replaces: imp-python3 (<< 2.13.0) Filename: jammy/imp_20241122.develop.d97d4ead1f-1_amd64.deb Size: 84961356 MD5sum: 4d7306ce624cd2c20745dc6ccbc1bc59 SHA1: 33a623281fed94d338df8a8fddd901b3a1ee58f5 SHA256: a971f7fdbb327090b40492fdb737d1cb1efa8db817e8a42b68f707db61ea49b0 SHA512: e4a698d418696e61b03b2e0e8d769ca7285368a0f7ce3a500543b3810a98c9476aece53099cbc0cbdd2210c5413af29c229567ea63604d6f030f5340fa6fbac7 Homepage: https://integrativemodeling.org/ Description: The Integrative Modeling Platform IMP's broad goal is to contribute to a comprehensive structural characterization of biomolecules ranging in size and complexity from small peptides to large macromolecular assemblies. Detailed structural characterization of assemblies is generally impossible by any single existing experimental or computational method. This barrier can be overcome by hybrid approaches that integrate data from diverse biochemical and biophysical experiments (eg, x-ray crystallography, NMR spectroscopy, electron microscopy, immuno-electron microscopy, footprinting, chemical cross-linking, FRET spectroscopy, small angle X-ray scattering, immunoprecipitation, genetic interactions, etc...). . We formulate the hybrid approach to structure determination as an optimization problem, the solution of which requires three main components: * the representation of the assembly, * the scoring function and * the optimization method. . The ensemble of solutions to the optimization problem embodies the most accurate structural characterization given the available information. . We created IMP, the Integrative Modeling Platform, to make it easier to implement such an integrative approach to structural and dynamics problems. IMP is designed to allow mixing and matching of existing modeling components as well as easy addition of new functionality.