Package: imp-dev Architecture: amd64 Version: 20241225.develop.63b38c487d-1 Priority: optional Section: libdevel Source: imp Maintainer: Ben Webb Installed-Size: 8114 Depends: imp (= 20241225.develop.63b38c487d-1), cmake, swig, libboost-filesystem-dev, libboost-graph-dev, libboost-iostreams-dev, libboost-program-options-dev, libboost-random-dev, libboost-regex-dev, libboost-thread-dev, libcgal-dev, libhdf5-dev, libfftw3-dev, libopencv-dev, libgsl-dev, python3-dev, libann-dev, libeigen3-dev, libcereal-dev, libprotobuf-dev Filename: jammy/imp-dev_20241225.develop.63b38c487d-1_amd64.deb Size: 1088954 MD5sum: 98e3ff54d03104a9327a70b70d6b1aa0 SHA1: b9ae12fce7f220e5b87e7c5ff2ad3d223f57e82c SHA256: fbe65e10c53bb463b4bf03900006336f699c7d5efe56dc72c1f6f7b149242607 SHA512: fab27786ee2cb7932636ed96a2e3560d4524e6bd5b783236055a08e0d3f245da21b2781edd4882ed2129e7f9f3029999ddda548c677eb9d06274dc65006952d6 Homepage: https://integrativemodeling.org/ Description: The Integrative Modeling Platform Headers to compile against IMP. Package: imp-openmpi Architecture: amd64 Version: 20241225.develop.63b38c487d-1 Priority: optional Section: libs Source: imp Maintainer: Ben Webb Installed-Size: 12170 Depends: imp (= 20241225.develop.63b38c487d-1), libboost-filesystem1.74.0 (>= 1.74.0), libboost-program-options1.74.0 (>= 1.74.0), libc6 (>= 2.34), libgcc-s1 (>= 3.0), libgomp1 (>= 4.2.1), libopencv-core4.5d (>= 4.5.4+dfsg), libopencv-imgcodecs4.5d (>= 4.5.4+dfsg), libopenmpi3 (>= 4.1.2), libstdc++6 (>= 11), python3-mpi4py Filename: jammy/imp-openmpi_20241225.develop.63b38c487d-1_amd64.deb Size: 1618484 MD5sum: 58b3a67a065f6323beee3b35b4951022 SHA1: 5feee8ff73a1134623f0607465a9c24d927ce574 SHA256: 0b55c0f943163a815df4ca8afceb2c4b5679d27d860b5fc4b77e174c337ab04b SHA512: bb758105db061bc2db93a32d0f2dbd1898eccab094a986ca064c2819687815bf10a5f92baf64d49602031f70f0cf8cad9a64111de712e3ed7f22e4d01aca06fe Homepage: https://integrativemodeling.org/ Description: The Integrative Modeling Platform IMP MPI module and dependents, for openmpi. Package: imp Architecture: amd64 Version: 20241225.develop.63b38c487d-1 Priority: optional Section: libs Maintainer: Ben Webb Installed-Size: 828311 Depends: libboost-filesystem1.74.0 (>= 1.74.0), libboost-graph1.74.0 (>= 1.74.0), libboost-iostreams1.74.0 (>= 1.74.0), libboost-program-options1.74.0 (>= 1.74.0), libboost-random1.74.0 (>= 1.74.0), libc6 (>= 2.34), libfftw3-double3 (>= 3.3.5), libgcc-s1 (>= 4.0), libgmp10 (>= 2:6.2.1+dfsg), libgomp1 (>= 4.9), libgsl27 (>= 2.7.1), libhdf5-103-1, libmpfr6 (>= 3.1.3), libopencv-core4.5d (>= 4.5.4+dfsg), libopencv-imgcodecs4.5d (>= 4.5.4+dfsg), libopencv-imgproc4.5d (>= 4.5.4+dfsg), libprotobuf23 (>= 3.12.4), libstdc++6 (>= 11), python3-numpy, python3-protobuf, python3-yaml Breaks: imp-python3 (<< 2.13.0) Replaces: imp-python3 (<< 2.13.0) Filename: jammy/imp_20241225.develop.63b38c487d-1_amd64.deb Size: 84810220 MD5sum: f0fa65e345b9a349243af5cba177afe4 SHA1: 05420a59b4bf31ce933f6fdd22f14ffa913f16d9 SHA256: e34ca9085e7074c114973ef56cc109d185a0bfa9be71bd38f5d02c5f283f5f66 SHA512: c139263a72e7965cd94c5e48e8bfe195415631ed26f7de4ebb52ba011b865ec959f3c9023208e47321e3d9514b5bd86ec2c33d5d2637833dee66c98fffd4d1ff Homepage: https://integrativemodeling.org/ Description: The Integrative Modeling Platform IMP's broad goal is to contribute to a comprehensive structural characterization of biomolecules ranging in size and complexity from small peptides to large macromolecular assemblies. Detailed structural characterization of assemblies is generally impossible by any single existing experimental or computational method. This barrier can be overcome by hybrid approaches that integrate data from diverse biochemical and biophysical experiments (eg, x-ray crystallography, NMR spectroscopy, electron microscopy, immuno-electron microscopy, footprinting, chemical cross-linking, FRET spectroscopy, small angle X-ray scattering, immunoprecipitation, genetic interactions, etc...). . We formulate the hybrid approach to structure determination as an optimization problem, the solution of which requires three main components: * the representation of the assembly, * the scoring function and * the optimization method. . The ensemble of solutions to the optimization problem embodies the most accurate structural characterization given the available information. . We created IMP, the Integrative Modeling Platform, to make it easier to implement such an integrative approach to structural and dynamics problems. IMP is designed to allow mixing and matching of existing modeling components as well as easy addition of new functionality.