spelling_exceptions=['dofs', 'kfs', 'kf','distance2']
function_name_exceptions=[
                     'DOFsSampler.get_dof',
		     'DOFValues.append',
		     'DOFValues.assign',
		     'DOFValues.back',
                     'DOFValues.begin', 'DOFValues.empty', 'DOFValues.end',
                     'DOFValues.erase','DOFValues.capacity', 'DOFValues.front',
                     'DOFValues.insert', 'DOFValues.iterator',
                     'DOFValues.rbegin', 'DOFValues.rend', 'DOFValues.resize',
                     'DOFValues.size', 'DOFsSampler.sample_and_apply',
		     'FibrilSampler.get_dof',
		     'FibrilSampler.sample_and_apply',
                     'KinematicForest.mark_external_coordinates_changed',
                     'KinematicForest.mark_internal_coordinates_changed',
		     'KinematicForest.transform_safe',
                     'UniformBackboneSampler.get_dof',
                     'LocalPlanner.is_valid',
                     'LocalPlanner.plan',
                     'PathLocalPlanner.is_valid',
                     'PathLocalPlanner.plan',
		     'ProteinKinematics.build_rigid_bodies',
		     'ProteinKinematics.build_topology_graph',
		     'ProteinKinematics.mark_rotatable_angle',
		     'ProteinKinematics.mark_rotatable_angles',
		     'ProteinKinematics.open_loop',
		     'ProteinKinematics.order_rigid_bodies',
                     'RRT.get_DOFValuesList',
		     'RRT.check_initial_configuration',
                     'UniformBackboneSampler.sample_and_apply'
]
show_exceptions=[]
value_object_exceptions=[]
