Package: imp-dev Architecture: amd64 Version: 20241122.develop.d97d4ead1f-1 Priority: optional Section: libdevel Source: imp Maintainer: Ben Webb Installed-Size: 8112 Depends: imp (= 20241122.develop.d97d4ead1f-1), cmake, swig, libboost-filesystem-dev, libboost-graph-dev, libboost-iostreams-dev, libboost-program-options-dev, libboost-random-dev, libboost-regex-dev, libboost-thread-dev, libcgal-dev, libhdf5-dev, libfftw3-dev, libopencv-dev, libgsl0-dev, python3-dev, libann-dev, libeigen3-dev, libcereal-dev, libprotobuf-dev Filename: focal/imp-dev_20241122.develop.d97d4ead1f-1_amd64.deb Size: 1069040 MD5sum: f9378a5a4f348e56592f628dfc966a97 SHA1: 1bc8125a0434add633654aa7dfc14ef003c9e240 SHA256: fa6f088c231b2081fbbd4952b88f7baeaf9f63b59ce8f12e8c70a5ef84107a3a SHA512: 294cba0d4a46bab7eff3e2c963f058883cccdc91c14c32d79c21f1439a1b62c98f6133d2e90274952dd400be7d066ed70963707e3d8bb07347d602a9817fdeb3 Homepage: https://integrativemodeling.org/ Description: The Integrative Modeling Platform Headers to compile against IMP. Package: imp-openmpi Architecture: amd64 Version: 20241122.develop.d97d4ead1f-1 Priority: optional Section: libs Source: imp Maintainer: Ben Webb Installed-Size: 12324 Depends: imp (= 20241122.develop.d97d4ead1f-1), libboost-filesystem1.71.0, libboost-program-options1.71.0, libc6 (>= 2.29), libgcc-s1 (>= 3.0), libgomp1 (>= 4.2.1), libopencv-core4.2 (>= 4.2.0+dfsg), libopencv-imgcodecs4.2 (>= 4.2.0+dfsg), libopenmpi3 (>= 4.0.3), libstdc++6 (>= 9), python3-mpi4py Filename: focal/imp-openmpi_20241122.develop.d97d4ead1f-1_amd64.deb Size: 1456784 MD5sum: 3137b59ec84071949c308f879d0b28a1 SHA1: f10cfecfb9b8fdd250e3ac15baf20326966a419c SHA256: c2c133d9a1b80fbe6a459b30955f0b1835c9ce39d000d5989c3e1b0b277f89b3 SHA512: cbd3c4848190037fb53793390cafea5009df5fc1b46286607638d635033ee2b024d93c95a11b3065f00568fb3b62441bbc471f5f4ed983369340d1483c760f44 Homepage: https://integrativemodeling.org/ Description: The Integrative Modeling Platform IMP MPI module and dependents, for openmpi. Package: imp Architecture: amd64 Version: 20241122.develop.d97d4ead1f-1 Priority: optional Section: libs Maintainer: Ben Webb Installed-Size: 832499 Depends: libboost-filesystem1.71.0, libboost-graph1.71.0, libboost-iostreams1.71.0, libboost-program-options1.71.0, libboost-random1.71.0, libc6 (>= 2.29), libfftw3-double3 (>= 3.3.5), libgcc-s1 (>= 4.0), libgmp10, libgomp1 (>= 4.9), libgsl23 (>= 2.5), libhdf5-103, libmpfr6 (>= 3.1.3), libopencv-core4.2 (>= 4.2.0+dfsg), libopencv-imgcodecs4.2 (>= 4.2.0+dfsg), libopencv-imgproc4.2 (>= 4.2.0+dfsg), libprotobuf17, libstdc++6 (>= 9), python3-numpy, python3-protobuf, python3-yaml Breaks: imp-python3 (<< 2.13.0) Replaces: imp-python3 (<< 2.13.0) Filename: focal/imp_20241122.develop.d97d4ead1f-1_amd64.deb Size: 80285276 MD5sum: 64326af56a20bf3fb77f1a872d2ad7ea SHA1: 6a1d4cd6bf4dda30a5d4ecf1cd54f29e274962d6 SHA256: ea0127e279f6839c0c404390a8ceaa137e7794f58c695bd8d0571e5bc488fdf5 SHA512: 49dc99b1aaed690e1cc1fca385ea04c2a951996ccdb2eba61514271a503cffd1519c04e5997faad0a678f568f7fa948d7a2e6821745acb59fa7054b127de29ee Homepage: https://integrativemodeling.org/ Description: The Integrative Modeling Platform IMP's broad goal is to contribute to a comprehensive structural characterization of biomolecules ranging in size and complexity from small peptides to large macromolecular assemblies. Detailed structural characterization of assemblies is generally impossible by any single existing experimental or computational method. This barrier can be overcome by hybrid approaches that integrate data from diverse biochemical and biophysical experiments (eg, x-ray crystallography, NMR spectroscopy, electron microscopy, immuno-electron microscopy, footprinting, chemical cross-linking, FRET spectroscopy, small angle X-ray scattering, immunoprecipitation, genetic interactions, etc...). . We formulate the hybrid approach to structure determination as an optimization problem, the solution of which requires three main components: * the representation of the assembly, * the scoring function and * the optimization method. . The ensemble of solutions to the optimization problem embodies the most accurate structural characterization given the available information. . We created IMP, the Integrative Modeling Platform, to make it easier to implement such an integrative approach to structural and dynamics problems. IMP is designed to allow mixing and matching of existing modeling components as well as easy addition of new functionality.