Package: imp-dev Architecture: amd64 Version: 20231210.develop.a74c288805-1 Priority: optional Section: libdevel Source: imp Maintainer: Ben Webb Installed-Size: 7031 Depends: imp (= 20231210.develop.a74c288805-1), cmake, swig, libboost-filesystem-dev, libboost-graph-dev, libboost-iostreams-dev, libboost-program-options-dev, libboost-random-dev, libboost-regex-dev, libboost-thread-dev, libcgal-dev, libhdf5-dev, libfftw3-dev, libopencv-dev, libgsl0-dev, python3-dev, libann-dev, libeigen3-dev, libcereal-dev, libprotobuf-dev Filename: focal/imp-dev_20231210.develop.a74c288805-1_amd64.deb Size: 933756 MD5sum: 1bd77bf071f04bc648f31b932d787ca9 SHA1: 74d2b96b0c778e24738a8618c54c9e87432ded6f SHA256: 98774fc9de8d4a767265ef6d90c04d211d6bf4b4efbe20317a4b5469b95e3b5c SHA512: 989962e8af3975da594e9dbdf2d8e9303e2804fe071c4aa61bad142caf1ff6a872f492083d2243ab5e4f59f71b367534eca3df9609537f4c9530bc582d46d8bc Homepage: https://integrativemodeling.org/ Description: The Integrative Modeling Platform Headers to compile against IMP. Package: imp-openmpi Architecture: amd64 Version: 20231210.develop.a74c288805-1 Priority: optional Section: libs Source: imp Maintainer: Ben Webb Installed-Size: 12591 Depends: imp (= 20231210.develop.a74c288805-1), libboost-filesystem1.71.0, libboost-program-options1.71.0, libc6 (>= 2.29), libgcc-s1 (>= 3.0), libgomp1 (>= 4.2.1), libopencv-core4.2 (>= 4.2.0+dfsg), libopencv-imgcodecs4.2 (>= 4.2.0+dfsg), libopenmpi3 (>= 4.0.3), libstdc++6 (>= 9) Filename: focal/imp-openmpi_20231210.develop.a74c288805-1_amd64.deb Size: 1506096 MD5sum: 15210c1c49aefafe58825e7f07f67aa4 SHA1: 3d822d493fe3a37c69772395e03793ed2f359fdf SHA256: 60d5cc59b49b20e8b2d384d36513cedbdd2d4bd75868431812aafafbcb3f5c35 SHA512: e8f02e12597e5811eb27e5a9d7ebd74fb650feda0a3f950f5e9771e9efa58fe1f9f2bed488bb5f96030218278d8a4ffe0d4178ca9f82e721fe5b82baf3a30216 Homepage: https://integrativemodeling.org/ Description: The Integrative Modeling Platform IMP MPI module and dependents, for openmpi. Package: imp-python2 Architecture: amd64 Version: 20231210.develop.a74c288805-1 Priority: optional Section: libs Source: imp Maintainer: Ben Webb Installed-Size: 118934 Depends: imp (= 20231210.develop.a74c288805-1), python-numpy, python-protobuf Filename: focal/imp-python2_20231210.develop.a74c288805-1_amd64.deb Size: 15157212 MD5sum: 5107e512b77defaca3d2895d07e6d124 SHA1: e83d3d7b177786aae2e5884ac4af0529ed758090 SHA256: e756a0ed325436d9566d250ea9c79405b0637b098f3d4a9967263a0a8eda198d SHA512: aa09675c6482b4e57821260bcd78a13038be0599aff91823833555d9f1d0811732667b97eda537d835bb06101a9e1a2b5394d3989fa13d5eecc85388e0964758 Homepage: https://integrativemodeling.org/ Description: The Integrative Modeling Platform Wrappers for Python 2 (the base IMP package contains Python 3 wrappers). Package: imp Architecture: amd64 Version: 20231210.develop.a74c288805-1 Priority: optional Section: libs Maintainer: Ben Webb Installed-Size: 471681 Depends: libboost-filesystem1.71.0, libboost-graph1.71.0, libboost-iostreams1.71.0, libboost-program-options1.71.0, libboost-random1.71.0, libc6 (>= 2.29), libfftw3-double3 (>= 3.3.5), libgcc-s1 (>= 4.0), libgmp10, libgomp1 (>= 4.9), libgsl23 (>= 2.5), libhdf5-103, libmpfr6 (>= 3.1.3), libopencv-core4.2 (>= 4.2.0+dfsg), libopencv-imgcodecs4.2 (>= 4.2.0+dfsg), libopencv-imgproc4.2 (>= 4.2.0+dfsg), libprotobuf17, libstdc++6 (>= 9), python3-numpy, python3-protobuf Breaks: imp-python3 (<< 2.13.0) Replaces: imp-python3 (<< 2.13.0) Filename: focal/imp_20231210.develop.a74c288805-1_amd64.deb Size: 53033240 MD5sum: e470602181d57fcc66506b24107f0741 SHA1: 17ac9f070ebeedca3880246d753d8763cd488101 SHA256: fe8f216f4dc0de1b5365261ce817c454184e74e9dcfa65076266dede0f87e02c SHA512: cb0cfad3ca3c53e59e49ae5dcba1d8775bd15865a143f29735d5e0829461165871ff0a0945902d5c1fde6a86576628276f15bee63503ad86235e3f123cc7dc38 Homepage: https://integrativemodeling.org/ Description: The Integrative Modeling Platform IMP's broad goal is to contribute to a comprehensive structural characterization of biomolecules ranging in size and complexity from small peptides to large macromolecular assemblies. Detailed structural characterization of assemblies is generally impossible by any single existing experimental or computational method. This barrier can be overcome by hybrid approaches that integrate data from diverse biochemical and biophysical experiments (eg, x-ray crystallography, NMR spectroscopy, electron microscopy, immuno-electron microscopy, footprinting, chemical cross-linking, FRET spectroscopy, small angle X-ray scattering, immunoprecipitation, genetic interactions, etc...). . We formulate the hybrid approach to structure determination as an optimization problem, the solution of which requires three main components: * the representation of the assembly, * the scoring function and * the optimization method. . The ensemble of solutions to the optimization problem embodies the most accurate structural characterization given the available information. . We created IMP, the Integrative Modeling Platform, to make it easier to implement such an integrative approach to structural and dynamics problems. IMP is designed to allow mixing and matching of existing modeling components as well as easy addition of new functionality.