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IMP Reference Guide  develop.b79bf0c255,2019/12/05
The Integrative Modeling Platform
IMP.pmi1.restraints.proteomics Namespace Reference

Restraints for handling various kinds of proteomics data. More...

Detailed Description

Restraints for handling various kinds of proteomics data.

Classes

class  AmbiguousCompositeRestraint
 this restraint allows ambiguous crosslinking between multiple copies excluding between symmetric copies It allows name ambiguity More...
 
class  CompositeRestraint
 handleparticles is a selection tuple compositeparticles is a list of selection tuples More...
 
class  ConnectivityNetworkRestraint
 a python restraint that computes the score for a composite of proteins Authors: G. More...
 
class  ConnectivityRestraint
 generate a connectivity restraint between domains setting up the restraint example: cr=restraints.ConnectivityRestraint(simo,["CCC",(1,100,"TTT"),(100,150,"AAA")]) cr.add_to_model() cr.set_label("CR1") Multistate support =No Selection type=selection tuple Resolution=Yes More...
 
class  FuzzyBoolean
 Fully Ambiguous Restraint that can be built using boolean logic R. More...
 
class  FuzzyRestraint
 Fully Ambiguous Restraint that can be built using boolean logic R. More...
 
class  SetupConnectivityNetworkRestraint
 generates and wraps a IMP.pmi1.ConnectivityRestraint between domains example: cr=restraints.ConnectivityNetworkRestraint(simo,["CCC",(1,100,"TTT"),(100,150,"AAA")]) cr.add_to_model() cr.set_label("CR1") More...
 
class  SetupMembraneRestraint