we just found out that we created the particle as a Domain and tried to process it as a fragment. sorry about that (albeit an error message would be helpful to prevent us from posting such problems).
anyways, is there any way to alter the residue range of a Domain after setting it up?
thanks
pia & friedrich
Am 19.01.2011 um 10:20 schrieb Pia Unverdorben:
> dear all,
>
> we tried to set the indexes of a fragment explicitly. however, the procedure seems to be incredibly slow in the following example where we tried to add residue numbers to a particle 'frag' (set up as a fragment). somehow, the last line takes ages (dies?).
> any hints would be appreciated.
>
> thanks
>
> pia & frido
>
> rs= IMP.Ints()
> for ii in (ifirst, ilast+1):
> rs.append(ii)
> tfrag = IMP.atom.Fragment(frag)
> tfrag.set_residue_indexes(rs)
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