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Re: [IMP-dev] radii and read pdbs



Hmmm, good point. Not sure supporting static executables is something to use to guide interface changes. We could just have read_pdb catch the exception as a hack to deal with incomplete IMP setups. BTW, there is now a function to set set search path for data at run time.


On Oct 30, 2010, at 11:12 AM, Dina Schneidman wrote:

> In that case any application will require the parameter files and
> handling the paths to them.
> I specifically added another way of adding radii to avoid dealing with
> those files (applications/saxs/profile.cpp).
> 
> On Sat, Oct 30, 2010 at 9:31 AM, Daniel Russel <> wrote:
>> Given that
>> - doing almost anything useful requires adding radii to atoms
>> - we currently have only one way to do that
>> - it generally doesn't matter what radii we use for atoms for most of what we do
>> - one can always overwrite the radii with other values if one wants other values
>> I propose the read_pdb function add radii to the atoms it creates.
>> 
>> Comments?
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>> 
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