Re: [IMP-dev] reading multiple chains

[Daniel Russel <>]

I can't reproduce it. I read the attached file and get the attached  
result for the resulting PDB which has all the residue indexes right.  
Can you provide an example pdb?

Attachment: results
Description: Binary data

Attachment: symm2.pdb
Description: Binary data

import IMP.atom
m= IMP.Model()
p= IMP.atom.read_pdb("../symm2.pdb", m)
IMP.atom.show_molecular_hierarchy(p)



On Oct 21, 2009, at 1:59 AM, Keren Lasker wrote:

> hey -
>
> so reading a pdb file with multiple chains, IMP changes the residues  
> indexes to have sequential residue indexes.
> so imagine 3 chains A from 1 to 10, B from 1 to 10 and C from 1 to 10
> reading into IMP we get:
> A from 1 to 10
> B from 11 to 20
> C from 21 to 30
>
> this really messes up stuff ....
>
> is there a special reason for that ?
>
> thanks,
> Keren.
>
>
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