Re: [IMP-dev] [Fwd: Build system failure, 08/28/2008]

[Ben Webb <>]

Daniel Russel wrote:
> Just to check, you need to have the NBL tests and the attribute removal 
> test, but no others?

Well, the two bipartite NBL tests, and the attribute removal test, yes. 
(The crash actually seems to occur in set_is_optimized, not in 
remove_attribute itself.) If I removed either one of the NBL tests, the 
bug went away. You can have *more* tests, but obviously it takes longer 
to run the test suite then.

> Now that I think about it, do we have any reasonable way of debugging  
> with wine? I wouldn't expect gdb to work.

There is winedbg (I just installed it) but I don't know how well that 
will work. Adding print statements is the time-honored fallback (not 
sure I'd call that 'reasonable' though).

> Are you using CGAL with wine? If not, then bbox NBL is actually a grid  
> NBL and I think there were a couple of bugs in that which I fixed but  
> never made it into IMP svn.  If you are using CGAL with wine, how do I  
> do that?

No, CGAL isn't built for Wine on synth yet, so IMP is a non-CGAL build.

	Ben
--
                      http://salilab.org/~ben/
"It is a capital mistake to theorize before one has data."
	- Sir Arthur Conan Doyle