Well, the set of all patches runs passes the tests on flute when run in
valgrind (other than the dna read which fails for a virgin svn copy).
And all pass (without valgrind) on my mac. I suspect the problem is
changes you made to the patches I submitted, but it is also possible
that the patches simply expose bugs created by the problems in attribute
table that a later patch fixed.
The first was the correct one - I missed the IMP_ADD_OBJECT(s) that you
added to IMP_CONTAINER_SWIG. Should be fixed now though.
For the DNA reader, you will need to update Modeller, since that has
been updated to work with remediated RNA and DNA.
Ben
--
http://salilab.org/~ben/
"It is a capital mistake to theorize before one has data."
- Sir Arthur Conan Doyle