interactive.h

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/**
 *  \file IMP/domino/interactive.h
 *  \brief Functions to get report statistics about the used attributes.
 *
 *  Copyright 2007-2015 IMP Inventors. All rights reserved.
 */

#ifndef IMPDOMINO_INTERACTIVE_H
#define IMPDOMINO_INTERACTIVE_H

#include <IMP/domino/domino_config.h>
#include "Assignment.h"
#include "Subset.h"
#include "subset_filters.h"
#include "assignment_containers.h"
#include <IMP/kernel/Particle.h>
#include <IMP/SingletonContainer.h>
#include <IMP/RestraintSet.h>
#include <IMP/kernel/Model.h>
#include <IMP/core/internal/CoreClosePairContainer.h>
#include <IMP/display/Writer.h>
#include <IMP/dependency_graph.h>
#include <IMP/statistics/metric_clustering.h>

#ifdef IMP_DOMINO_USE_IMP_RMF
#include <RMF/HDF5/Group.h>
#endif

IMPDOMINO_BEGIN_NAMESPACE

//! Fill in assignments for a leaf
IMPDOMINOEXPORT void load_leaf_assignments(const Subset &subset,
                                           AssignmentsTable *at,
                                           AssignmentContainer *ac);

//! Fill in assignments for an internal node
/** The passed assignments, the ordering for the children is that of
    the node indexes for the children.
*/
IMPDOMINOEXPORT void load_merged_assignments(
    const Subset &first_subset, AssignmentContainer *first,
    const Subset &second_subset, AssignmentContainer *second,
    const SubsetFilterTablesTemp &filters, AssignmentContainer *ret);

//! Sample from the merged assignments.
/** The passed assignments, the ordering for the children is that of
      the node indexes for the children.

      It will try maximum_tries times to merge an assignment from the first
      set with a randomly chosen assignment from the second. Note that
    duplicate
      solutions may be present in the output and the output will never be
      guaranteed to be complete.

      \unstable{load_sampled_merged_assignments}
  */
IMPDOMINOEXPORT void load_merged_assignments_random_order(
    const Subset &first_subset, AssignmentContainer *first,
    const Subset &second_subset, AssignmentContainer *second,
    const SubsetFilterTablesTemp &filters, unsigned int maximum_tries,
    AssignmentContainer *ret);

IMPDOMINO_END_NAMESPACE

#endif /* IMPDOMINO_INTERACTIVE_H */