IMP  2.2.0
The Integrative Modeling Platform
isd.h
Go to the documentation of this file.
1 /**
2  * \file IMP/isd.h
3  * \brief A container which has pairs which ensure a set is connected
4  *
5  * Copyright 2007-2014 IMP Inventors. All rights reserved.
6  */
7 
8 #ifndef IMP_ISD_H
9 #define IMP_ISD_H
12 #include <IMP/isd/CrossLinkData.h>
15 #include <IMP/isd/FNormal.h>
16 #include <IMP/isd/FretData.h>
17 #include <IMP/isd/FretRestraint.h>
29 #include <IMP/isd/NOERestraint.h>
30 #include <IMP/isd/Nuisance.h>
32 #include <IMP/isd/Scale.h>
33 #include <IMP/isd/Switching.h>
34 #include <IMP/isd/TALOSRestraint.h>
35 #include <IMP/isd/Weight.h>
36 #include <IMP/isd/WeightMover.h>
40 #include <IMP/isd/vonMises.h>
44 #endif /* IMP_ISD_H */
Normal distribution of Function.
Jeffreys prior for in the von Mises distribution.
Normal distribution of Function.
Normal distribution of Function.
Normal distribution of Function.
A lognormal restraint that uses the ISPA model to model NOE-derived distance fit. ...
A lognormal restraint that uses the ISPA model to model HBond-derived distance fit.
An implementation of the d-norm to make an ambiguous restraint.
A decorator for switching parameters particles.
A decorator for scale parameters particles.
A modifier which perturbs XYZs or Nuisances with a constant energy MD simulation. ...
Simple molecular dynamics optimizer.
A decorator for nuisance parameters particles.
Classes for general functions.
Normal distribution of Function.
Normal distribution of Function.
Normal distribution of Function.
A hybrid monte carlo implementation.
A mover that transforms a rigid body.
A lognormal restraint that uses the ISPA model to model NOE-derived distance fit. ...
A lognormal restraint that uses the ISPA model to model NOE-derived distance fit. ...
Put description here.
A lognormal restraint that uses the ISPA model to model NOE-derived distance fit. ...
Add weights for a set of states to a particle.
FRET_R restraint to use in vivo FRET data [Muller et al. Mol Biol Cell 16, 3341, 2005].
A restraint on a scale parameter.
A sigmoid shaped restraint between residues with discrete classifier and ambiguous assignment...
TALOS dihedral restraint between four particles.
kernel::Restraint and ScoreState for GaussianProcessInterpolation
A lognormal restraint that uses the ISPA model to model NOE-derived distance fit. ...
A simple quadric repulsive term between two atoms. Restraint is zero when the distance equals the sum...
Auxiliary class useful for FRET_R restraint.
Classes for general functions.
Conjugate prior for in the von Mises distribution.