IMP  2.1.1
The Integrative Modeling Platform
Tools

Tools

IMP provides a variety of scripts to aid the lives of developers.

Making a module

Creating such a module is the easiest way to get started developing code for IMP. First, choose a name for the module. The name should only contain letters, numbers and underscores as it needs to be a valid file name as well as an identifier in Python and C++.

To create the module do ./tools/make-module.py my_module. The new module includes a number of examples and comments to help you add code to the module.

You can use your new module in a variety of ways:

  • add C++ code to your module by putting .h files in modules/my_module/include and .cpp files in modules/my_module/src. In order to use use your new functions and classes in Python, you must add a line include "IMP/my_module/myheader.h" near the end of the file modules/my_module/pyext/my_module.i.
  • write C++ programs using IMP by creating .cpp files in modules/my_module/bin. Each .cpp file placed there is built into a separate executable.
  • add Python code to your library by putting a .py file in modules/my_module/pyext/my_module/
  • add Python code to your library by by adding pythoncode blocks to modules/my_module/pyext/my_module.i.
  • add test code to your library by putting .py files in modules/my_module/test or a subdirectory.

If you feel your module is of interest to other IMP users and developers, see the contributing code to IMP section.

If you document your code, building the target IMP-doc will build documentation of all of the modules including yours and IMP.mymodule-doc will build the doc for just yours. To access the documentation for all of IMP, open doc/html/index.html and for just your module, open doc/html/mymodule/index.html

Formatting your code

The command ./tools/clang-format.py uses the program clang-format to reformat C++ code, working around some eccentricies of IMP code. clang-format is part of llvm >= 3.3. You should always inspect the changes made by clang-format before submitting.

Checking standards

The command ./tools/check-standards.py runs a number of IMP-specific standards checks on C++ and Python files. It is also run as part of git commits.