anchor_utilities.h File Reference

Common functions in anchor calculations. More...

#include <IMP/multifit/multifit_config.h>
#include <IMP/atom/Hierarchy.h>
#include <IMP/statistics/internal/VQClustering.h>
#include <IMP/statistics/internal/DataPoints.h>
#include "DataPointsAssignment.h"
#include "anchors_reader.h"

Include dependency graph for anchor_utilities.h:

This graph shows which files directly or indirectly include this file:

Go to the source code of this file.

Namespaces
	IMP
	All IMP::kernel code is brought into the IMP namespace.
	IMP::multifit
	See IMP.multifit for more information.

Functions
IntsList	IMP::multifit::get_anchor_indices_matching_secondary_structure (const AnchorsData &ad, const atom::SecondaryStructureResidues &ssrs, Float max_rmsd=0.7)
	Get lists of anchors that match a sequence of secondary structures. More...
void	IMP::multifit::get_anchors_for_density (em::DensityMap *dmap, int number_of_means, float density_threshold, std::string pdb_filename, std::string cmm_filename, std::string seg_filename, std::string txt_filename)
	Generate anchors in several formats for a given density map.
AnchorsData	IMP::multifit::molecule2anchors (atom::Hierarchy mh, int k)

Detailed Description

Copyright 2007-2013 IMP Inventors. All rights reserved.

Definition in file anchor_utilities.h.