SecondaryStructureResidue.h File Reference

A decorator for storing secondary structure probabilities. Copyright 2007-2013 IMP Inventors. All rights reserved. More...

#include "atom_config.h"
#include "atom_macros.h"
#include "Hierarchy.h"
#include <IMP/base_types.h>
#include <IMP/kernel/Particle.h>
#include <IMP/kernel/Model.h>
#include <IMP/Decorator.h>

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Classes
class	IMP::atom::SecondaryStructureResidue
	A decorator for a residue with probability of secondary structure. More...

Namespaces
	IMP
	All IMP::kernel code is brought into the IMP namespace.
	IMP::atom
	See IMP.atom for more information.

Typedefs
typedef IMP::base::Vector < SecondaryStructureResidue >	IMP::atom::SecondaryStructureResidues

Functions
Float	IMP::atom::get_secondary_structure_match_score (SecondaryStructureResidue ssr1, SecondaryStructureResidue ssr2)
SecondaryStructureResidue	IMP::atom::setup_coarse_secondary_structure_residue (const kernel::Particles &ssr_ps, kernel::Model *mdl, bool winner_takes_all_per_res=false)
SecondaryStructureResidues	IMP::atom::setup_coarse_secondary_structure_residues (const kernel::Particles &ssr_ps, kernel::Model *mdl, int coarse_factor, int start_res_num, bool winner_takes_all_per_res=false)