IMP
2.0.1
The Integrative Modeling Platform
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A beyesian infererence-based sampler. More...
#include "particle_states.h"
#include "Subset.h"
#include <IMP/ScoringFunction.h>
#include <IMP/display/declare_Geometry.h>
#include <boost/graph/adjacency_list.hpp>
Go to the source code of this file.
Namespaces | |
namespace | IMP |
All IMP::kernel code is brought into the IMP namespace. | |
namespace | IMP::domino |
See IMP.domino Overview for more information. | |
Typedefs | |
typedef boost::graph | IMP::domino::InteractionGraph |
typedef InteractionGraph::EdgeNameMap | IMP::domino::InteractionGraphConstEdgeName |
typedef InteractionGraph::VertexNameMap | IMP::domino::InteractionGraphConstVertexName |
typedef InteractionGraph::edge_descriptor | IMP::domino::InteractionGraphEdge |
typedef boost::graph_traits < InteractionGraph > | IMP::domino::InteractionGraphTraits |
typedef InteractionGraph::vertex_descriptor | IMP::domino::InteractionGraphVertex |
typedef boost::graph | IMP::domino::SubsetGraph |
typedef SubsetGraph::EdgeNameMap | IMP::domino::SubsetGraphConstEdgeName |
typedef SubsetGraph::VertexNameMap | IMP::domino::SubsetGraphConstVertexName |
typedef SubsetGraph::edge_descriptor | IMP::domino::SubsetGraphEdge |
typedef boost::graph_traits < SubsetGraph > | IMP::domino::SubsetGraphTraits |
typedef SubsetGraph::vertex_descriptor | IMP::domino::SubsetGraphVertex |
Functions | |
SubsetGraph | IMP::domino::get_junction_tree (const InteractionGraph &ig) |
SubsetGraph | IMP::domino::get_restraint_graph (ScoringFunctionAdaptor rs, const ParticleStatesTable *pst) |
Subsets | IMP::domino::get_subsets (const SubsetGraph &g) |
Gets all of the Subsets of a SubsetGraph. | |
Debugging Junction Trees | |
typedef boost::graph | IMP::domino::CliqueGraph |
InteractionGraph | IMP::domino::get_triangulated (const InteractionGraph &input) |
CliqueGraph | IMP::domino::get_clique_graph (const InteractionGraph &input) |
SubsetGraph | IMP::domino::get_minimum_spanning_tree (const CliqueGraph &input) |
typedef boost::graph | IMP::domino::MergeTree |
typedef MergeTree::VertexNameMap | IMP::domino::MergeTreeConstVertexName |
typedef MergeTree::EdgeNameMap | IMP::domino::MergeTreeConstEdgeName |
typedef boost::graph_traits < MergeTree > | IMP::domino::MergeTreeTraits |
typedef MergeTree::vertex_descriptor | IMP::domino::MergeTreeVertex |
typedef MergeTree::edge_descriptor | IMP::domino::MergeTreeEdge |
SubsetGraphVertexIndex | IMP::domino::get_vertex_index (const SubsetGraph &g) |
InteractionGraph | IMP::domino::get_interaction_graph (ScoringFunctionAdaptor rs, const ParticleStatesTable *pst) |
InteractionGraph | IMP::domino::get_interaction_graph (ScoringFunctionAdaptor rs, const ParticlesTemp &pst) |
display::Geometries | IMP::domino::get_interaction_graph_geometry (const InteractionGraph &ig) |
display::Geometries | IMP::domino::get_subset_graph_geometry (const SubsetGraph &ig) |
MergeTree | IMP::domino::get_merge_tree (ScoringFunctionAdaptor input, const ParticleStatesTable *pst) |
MergeTree | IMP::domino::get_merge_tree (const SubsetGraph &junction_tree) |
MergeTree | IMP::domino::get_balanced_merge_tree (const SubsetGraph &junction_tree) |
bool | IMP::domino::get_is_merge_tree (const MergeTree &tree, Subset all, bool verbose=true) |
Copyright 2007-2013 IMP Inventors. All rights reserved.
Definition in file subset_graphs.h.