IMP
2.0.1
The Integrative Modeling Platform
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Agglomerative clustering algorithm. More...
#include "IMP/em2d/em2d_config.h"
#include "IMP/em2d/scores2D.h"
#include "IMP/base_types.h"
#include <IMP/log.h>
#include <vector>
#include <list>
#include <algorithm>
#include <limits>
#include <functional>
Go to the source code of this file.
Namespaces | |
namespace | IMP |
All IMP::kernel code is brought into the IMP namespace. | |
namespace | IMP::em2d |
See IMP.em2d Overview for more information. | |
Typedefs | |
typedef IMP::base::Vector < AverageDistanceLinkage > | IMP::em2d::AverageDistanceLinkages |
typedef IMP::base::Vector < ClusterSet > | IMP::em2d::ClusterSets |
typedef IMP::base::Vector < CompleteLinkage > | IMP::em2d::CompleteLinkages |
typedef std::list < pair_cluster_id_distance > | IMP::em2d::list_cluster_id_distance |
typedef std::pair< unsigned int,double > | IMP::em2d::pair_cluster_id_distance |
typedef IMP::base::Vector < SingleLinkage > | IMP::em2d::SingleLinkages |
typedef FloatsList | IMP::em2d::VectorOfFloats |
typedef IntsList | IMP::em2d::VectorOfInts |
Functions | |
template<class LinkageFunction > | |
ClusterSet | IMP::em2d::do_hierarchical_agglomerative_clustering (const FloatsList &distances) |
template<class T > | |
void | IMP::em2d::print_vector (const std::vector< T > &v) |
Copyright 2007-2013 IMP Inventors. All rights reserved.
Definition in file hierarchical_clustering.h.